FC931422

Overview
NameFC931422
Unique NameFC931422
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length685
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC931422 vs. ExPASy Swiss-Prot
Match: CBR1_MACFA (Carbonyl reductase [NADPH] 1 OS=Macaca fascicularis GN=CBR1 PE=2 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 1.783e-18
Identity = 61/163 (37.42%), Postives = 91/163 (55.83%), Query Frame = 3
Query:   27 RYAVVTGANKGIGYEVVRQLA--LNGVITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKLMVK 509
            R A+VTG+NKGIG  +VR L    +G + VLTARD   G  AV++L+  G  +  FHQLD+ D  +I ++ DF+   +G LD+LVNNAGI    +D                 T  +  AE  ++TN+ G + +C  L+PL++     R+VN+SS +    +K
Sbjct:    6 RVALVTGSNKGIGLAIVRDLCRLFSGEV-VLTARDVARGQAAVQQLQAEGL-SPRFHQLDIDDLQSIRTLRDFLLKEYGGLDVLVNNAGIAFKVADP----------------TPFHIQAEVTMKTNFFGTRDVCTELLPLIK--PQGRVVNISSMMSLRALK 148          
BLAST of FC931422 vs. ExPASy Swiss-Prot
Match: CBR3_HUMAN (Carbonyl reductase [NADPH] 3 OS=Homo sapiens GN=CBR3 PE=1 SV=3)

HSP 1 Score: 88.5817 bits (218), Expect = 3.363e-17
Identity = 58/158 (36.71%), Postives = 86/158 (54.43%), Query Frame = 3
Query:   18 SIFRYAVVTGANKGIGYEVVRQLA--LNGVITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSS 485
            S  R A+VTGAN+GIG  + R+L    +G + VLTARD   G  AV++L+  G  +  FHQLD+ D  +I ++ DF+R  +G L++LVNNA +   S D                       AE  L+TN+   + MC  L+P+++     R+VN+SS
Sbjct:    3 SCSRVALVTGANRGIGLAIARELCRQFSGDV-VLTARDVARGQAAVQQLQAEGL-SPRFHQLDIDDLQSIRALRDFLRKEYGGLNVLVNNAAVAFKSDDPMPFD----------------IKAEMTLKTNFFATRNMCNELLPIMK--PHGRVVNISS 140          
BLAST of FC931422 vs. ExPASy Swiss-Prot
Match: CBR1_RABIT (Carbonyl reductase [NADPH] 1 OS=Oryctolagus cuniculus GN=CBR1 PE=2 SV=2)

HSP 1 Score: 88.5817 bits (218), Expect = 3.363e-17
Identity = 58/154 (37.66%), Postives = 86/154 (55.84%), Query Frame = 3
Query:   27 RYAVVTGANKGIGYEVVRQLA-LNGVITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSS 485
            R A+VTGANKG+G+ + R L  L     +LTA+DE  G  AV++L+  G  +  FHQLD+ D  +I ++ DF+R  +G L++LVNNA I     D                 T  +  AE  ++TN+ G + +C  L+PL++     R+VNVSS
Sbjct:    6 RVALVTGANKGVGFAITRALCRLFSGDVLLTAQDEAQGQAAVQQLQAEGL-SPRFHQLDITDLQSIRALRDFLRRAYGGLNVLVNNAVIAFKMEDT----------------TPFHIQAEVTMKTNFDGTRDVCTELLPLMR--PGGRVVNVSS 140          
BLAST of FC931422 vs. ExPASy Swiss-Prot
Match: DHR13_BOVIN (Dehydrogenase/reductase SDR family member 13 OS=Bos taurus GN=DHRS13 PE=2 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 3.258e-12
Identity = 53/155 (34.19%), Postives = 76/155 (49.03%), Query Frame = 3
Query:   27 RYAVVTGANKGIGYEVVRQLALNGVITVLTARD-EKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSS 488
            R AVVTGAN GIG     +LA  G   VL  R  E+G   A +  + SG + VIF  LD+A  A++ + A    S   +LDIL++NAGI+                       +T E     L+ N++G   +   L+P L+ S  +R+V VSS+
Sbjct:   37 RTAVVTGANSGIGKMTALELARRGARVVLACRSRERGEAAAFDLRQESGNNEVIFMALDLASLASVRAFATAFLSSEPRLDILIHNAGISSCG--------------------RTREPFNLLLRVNHIGPFLLTHLLLPRLKTSAPSRVVVVSSA 171          
BLAST of FC931422 vs. ExPASy Swiss-Prot
Match: DHK1_STRVN (Granaticin polyketide synthase putative ketoacyl reductase 1 OS=Streptomyces violaceoruber GN=gra-orf5 PE=3 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 3.258e-12
Identity = 53/155 (34.19%), Postives = 80/155 (51.61%), Query Frame = 3
Query:   33 AVVTGANKGIGYEVVRQLALNGVITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGK 497
            A+VTGA  GIG  + R+LA  G  T L ARDE+   + V++L+  GFD V     DVADPA I +        +G +DILVNNAG +G  + A+ ++  +   V    +T  +   ++ L    + AK+               RI+N++S+ GK
Sbjct:   20 ALVTGATSGIGLAIARRLAALGARTFLCARDEERLAQTVKELRGEGFD-VDGTVCDVADPAQIRAYVAAAVQRYGTVDILVNNAGRSGGGATAE-IADELWLDVITTNLTSVFLMTKEVLNAGGMLAKK-------------RGRIINIASTGGK 159          
BLAST of FC931422 vs. ExPASy Swiss-Prot
Match: DHR13_HUMAN (Dehydrogenase/reductase SDR family member 13 OS=Homo sapiens GN=DHRS13 PE=1 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 5.557e-12
Identity = 55/171 (32.16%), Postives = 83/171 (48.54%), Query Frame = 3
Query:   27 RYAVVTGANKGIGYEVVRQLALNGVITVLTARD-EKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSL---GKLMVKQFYSPL 527
            R AVVTGAN GIG     +LA  G   VL  R  E+G   A +  + SG + VIF  LD+A  A++ + A    S   +LDIL++NAGI+                       +T E+    L+ N++G   +   L+P L+    +R+V V+S+    G+L  K+   P+
Sbjct:   37 RTAVVTGANSGIGKMTALELARRGARVVLACRSQERGEAAAFDLRQESGNNEVIFMALDLASLASVRAFATAFLSSEPRLDILIHNAGISSCG--------------------RTREAFNLLLRVNHIGPFLLTHLLLPCLKACAPSRVVVVASAAHCRGRLDFKRLDRPV 187          
BLAST of FC931422 vs. ExPASy Swiss-Prot
Match: FABG_SHIFL (3-oxoacyl-[acyl-carrier-protein] reductase OS=Shigella flexneri GN=fabG PE=3 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 9.479e-12
Identity = 51/158 (32.28%), Postives = 77/158 (48.73%), Query Frame = 3
Query:   27 RYAVVTGANKGIGYEVVRQLALNGVITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKL 500
            + A+VTGA++GIG  +   LA  G   + TA  E G     + L  +G   +    L+V DPA+I SV + IR+ FG++DILVNNAGIT      D L            M    E     ++TN     R+ +A++  +      RI+ + S +G +
Sbjct:    6 KIALVTGASRGIGRAIAETLAARGAKVIGTATSENGAQAISDYLGANGKGLM----LNVTDPASIESVLEKIRAEFGEVDILVNNAGIT-----RDNL-----------LMRMKDEEWNDIIETNLSSVFRLSKAVMRAMMKKRHGRIITIGSVVGTM 143          
BLAST of FC931422 vs. ExPASy Swiss-Prot
Match: FABG_ECOLI (3-oxoacyl-[acyl-carrier-protein] reductase OS=Escherichia coli (strain K12) GN=fabG PE=1 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 9.479e-12
Identity = 51/158 (32.28%), Postives = 77/158 (48.73%), Query Frame = 3
Query:   27 RYAVVTGANKGIGYEVVRQLALNGVITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKL 500
            + A+VTGA++GIG  +   LA  G   + TA  E G     + L  +G   +    L+V DPA+I SV + IR+ FG++DILVNNAGIT      D L            M    E     ++TN     R+ +A++  +      RI+ + S +G +
Sbjct:    6 KIALVTGASRGIGRAIAETLAARGAKVIGTATSENGAQAISDYLGANGKGLM----LNVTDPASIESVLEKIRAEFGEVDILVNNAGIT-----RDNL-----------LMRMKDEEWNDIIETNLSSVFRLSKAVMRAMMKKRHGRIITIGSVVGTM 143          
BLAST of FC931422 vs. ExPASy Swiss-Prot
Match: FABG_SALTY (3-oxoacyl-[acyl-carrier-protein] reductase OS=Salmonella typhimurium GN=fabG PE=3 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 4.704e-11
Identity = 49/158 (31.01%), Postives = 76/158 (48.10%), Query Frame = 3
Query:   27 RYAVVTGANKGIGYEVVRQLALNGVITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKL 500
            + A+VTGA++GIG  +   L   G   + TA  E G     + L  +G   +    L+V DPA+I SV + IR+ FG++DILVNNAGIT      D L            M    +     ++TN     R+ +A++  +      RI+ + S +G +
Sbjct:    6 KIALVTGASRGIGRAIAETLVARGAKVIGTATSENGAKNISDYLGANGKGLM----LNVTDPASIESVLENIRAEFGEVDILVNNAGIT-----RDNL-----------LMRMKDDEWNDIIETNLSSVFRLSKAVMRAMMKKRCGRIITIGSVVGTM 143          
BLAST of FC931422 vs. ExPASy Swiss-Prot
Match: FABG_SALTI (3-oxoacyl-[acyl-carrier-protein] reductase OS=Salmonella typhi GN=fabG PE=3 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 4.704e-11
Identity = 49/158 (31.01%), Postives = 76/158 (48.10%), Query Frame = 3
Query:   27 RYAVVTGANKGIGYEVVRQLALNGVITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKL 500
            + A+VTGA++GIG  +   L   G   + TA  E G     + L  +G   +    L+V DPA+I SV + IR+ FG++DILVNNAGIT      D L            M    +     ++TN     R+ +A++  +      RI+ + S +G +
Sbjct:    6 KIALVTGASRGIGRAIAETLVARGAKVIGTATSENGAKNISDYLGANGKGLM----LNVTDPASIESVLENIRAEFGEVDILVNNAGIT-----RDNL-----------LMRMKDDEWNDIIETNLSSVFRLSKAVMRAMMKKRCGRIITIGSVVGTM 143          
The following BLAST results are available for this feature:
BLAST of FC931422 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 25
Match NameE-valueIdentityDescription
CBR1_MACFA1.783e-1837.42Carbonyl reductase [NADPH] 1 OS=Macaca fasciculari... [more]
CBR3_HUMAN3.363e-1736.71Carbonyl reductase [NADPH] 3 OS=Homo sapiens GN=CB... [more]
CBR1_RABIT3.363e-1737.66Carbonyl reductase [NADPH] 1 OS=Oryctolagus cunicu... [more]
DHR13_BOVIN3.258e-1234.19Dehydrogenase/reductase SDR family member 13 OS=Bo... [more]
DHK1_STRVN3.258e-1234.19Granaticin polyketide synthase putative ketoacyl r... [more]
DHR13_HUMAN5.557e-1232.16Dehydrogenase/reductase SDR family member 13 OS=Ho... [more]
FABG_SHIFL9.479e-1232.283-oxoacyl-[acyl-carrier-protein] reductase OS=Shig... [more]
FABG_ECOLI9.479e-1232.283-oxoacyl-[acyl-carrier-protein] reductase OS=Esch... [more]
FABG_SALTY4.704e-1131.013-oxoacyl-[acyl-carrier-protein] reductase OS=Salm... [more]
FABG_SALTI4.704e-1131.013-oxoacyl-[acyl-carrier-protein] reductase OS=Salm... [more]

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Properties
Property NameValue
Genbank descriptionC34104H11EF PostHarvP1 Citrus clementina cDNA clone C34104H11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931422 ID=FC931422; Name=FC931422; organism=Citrus clementina; type=EST; length=685bp
ATCTTGGCACACTATATTCTATATTCAGGTATGCAGTTGTTACAGGAGCA
AATAAGGGAATTGGGTATGAAGTAGTGAGGCAATTGGCTTTAAATGGGGT
CATTACGGTACTAACAGCCAGAGATGAGAAGGGGGGTCTTGAAGCTGTTG
AAAAACTCAAACACTCTGGCTTTGATAATGTGATCTTTCATCAGCTTGAT
GTTGCAGACCCTGCTGCTATTCACTCTGTAGCTGATTTCATTCGAAGTCA
TTTTGGAAAGCTTGATATTTTGGTAAATAATGCAGGGATTACTGGAATCA
GTTCGGATGCTGATACTTTGTCAGGTTTTATTGAGGAAGGTGTTGCAAGA
GGAAAAATGACTCAAACTTATGAGTCAGCTGAAAAGTGCCTGCAAACAAA
CTACTTGGGGGCCAAAAGAATGTGTGAAGCACTCATTCCTCTCCTCCAGT
TATCCGATTCAGCAAGAATTGTTAATGTATCCTCTTCCTTGGGAAAGTTG
ATGGTAAAACAGTTTTACAGCCCTTTATAAAATTGAACTAGTTGACATTC
AGGTAGTAATTAAGCCCAATTTGGCCGCTAAATTTTGCTTCCACTGCATC
TGATATTCCCTTATAATTACCTGTAGATCGATATTGGAGTACTCCTTGTC
TCNAATTTTAATTATGATTAAGTTCATTGGAATCA
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