FC931422

Overview
NameFC931422
Unique NameFC931422
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length685
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC931422 vs. ExPASy Swiss-Prot
Match: DRS7B_RAT (Dehydrogenase/reductase SDR family member 7B OS=Rattus norvegicus GN=Dhrs7b PE=1 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 4.704e-11
Identity = 52/162 (32.10%), Postives = 72/162 (44.44%), Query Frame = 3
Query:   36 VVTGANKGIGYEVVRQLALNGVITVLTARDEKGGLEAVEKLKHSGFDNVIFHQ-----LDVADPAAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKLMV 506
            VVTGA  G+G E  R     G   VL  R+ K   E   +L  S       HQ      D+ADP AI   A  I   FG +DIL+NNAGI+   + +DT+                 +   K ++ NY G   + +AL+P +       IV +SS  GK+ +
Sbjct:   56 VVTGATSGLGKECARVFHAAGAKVVLCGRNVKALEEFTRELADSSSSQGQTHQPCVVTFDLADPGAIAPAAAEILQCFGYVDILINNAGISYRGAISDTI----------------VDVDRKVMEINYFGPVALTKALLPSMVERKRGHIVAISSIQGKISI 201          
BLAST of FC931422 vs. ExPASy Swiss-Prot
Match: DHR13_MOUSE (Dehydrogenase/reductase SDR family member 13 OS=Mus musculus GN=Dhrs13 PE=1 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 4.704e-11
Identity = 50/155 (32.26%), Postives = 75/155 (48.39%), Query Frame = 3
Query:   27 RYAVVTGANKGIGYEVVRQLALNGVITVLTARD-EKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSS 488
            R  VVTGAN GIG     +LA  G   VL  R  E+G   A +  + SG + VIF  LD+A  A++ + A    S   +LD+L++NAGI+                       +T E+    L+ N++G   +   L+P L+    +R+V VSS+
Sbjct:   37 RTVVVTGANSGIGKMTALELARRGARVVLACRSRERGEAAAFDLRQESGNNEVIFMALDLASLASVQAFATAFLSSEPRLDVLIHNAGISSCG--------------------RTRETFNLLLRVNHVGPFLLTHLLLPRLRSCAPSRVVIVSSA 171          
BLAST of FC931422 vs. ExPASy Swiss-Prot
Match: DHKR_STRCM (Monensin polyketide synthase putative ketoacyl reductase OS=Streptomyces cinnamonensis PE=3 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 4.704e-11
Identity = 51/162 (31.48%), Postives = 76/162 (46.91%), Query Frame = 3
Query:   18 SIFRYAVVTGANKGIGYEVVRQLALNGVITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPL--LQLSDSARIVNVSSSLGK 497
            S  R A+VTGA  GIG    R LA  G +  L AR E   +  V+ L++ G +      LDV D A++ +        +G++D+LVNNAG +G    AD                 T E  +  + TN     RM  A++    ++  +  RI+NV+S+ GK
Sbjct:    4 STSRVALVTGATSGIGLATARLLAAQGHLVFLGARTESDVIATVKALRNDGLE-AEGQVLDVRDGASVTAFVQAAVDRYGRIDVLVNNAGRSGGGVTADL----------------TDELWDDVIDTNLNSVFRMTRAVLTTGGMRTRERGRIINVASTAGK 148          
BLAST of FC931422 vs. ExPASy Swiss-Prot
Match: DRS7B_BOVIN (Dehydrogenase/reductase SDR family member 7B OS=Bos taurus GN=DHRS7B PE=2 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 6.144e-11
Identity = 50/161 (31.06%), Postives = 73/161 (45.34%), Query Frame = 3
Query:   36 VVTGANKGIGYEVVRQLALNGVITVLTARDEKGGLEAVEKLKHSGFDNVIFHQ-----LDVADPAAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEK-CLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKL 500
            V+TGA  G+G E  R     G   VL  R+ +   E  ++L  S    V  H+      D+ADP AI   A  I   FG +D+L+NNAGI+                  RG +  T    +K  ++TNY G   + +AL+P +       +V +SS  GK+
Sbjct:   56 VITGATSGLGRECARVFHAAGARLVLCGRNAEALEELSQELAASRAPGVQTHKPCTVTFDLADPGAIAGAASEILQCFGHVDVLINNAGIS-----------------YRGAIVDTSPDVDKRVMETNYFGPVALTKALLPAMIRRRQGHVVAISSIQGKI 199          
BLAST of FC931422 vs. ExPASy Swiss-Prot
Match: DRS7B_XENTR (Dehydrogenase/reductase SDR family member 7B OS=Xenopus tropicalis GN=dhrs7b PE=2 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 8.024e-11
Identity = 49/163 (30.06%), Postives = 77/163 (47.24%), Query Frame = 3
Query:   36 VVTGANKGIGYEVVRQLALNGVITVLTARDEKGGLEAVEKLKHSGFDNVIFHQ-----LDVADPAAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEK-CLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKLMV 506
            V+TGA  G+G E  +     G   VL  R E+G    V++L      +   H+      D++D  A++S A+ I    G++DIL+NNAGI+                  RG +  T  S ++  + TNY G   + +ALIP +  +    IV +SS  GK+ +
Sbjct:   40 VITGATSGLGRECAKVFYAAGTRLVLCGRSEEGLKNLVQELSQMRIKSAQLHKPHMVIFDLSDVEAVNSAANEILHLTGRVDILINNAGIS-----------------YRGTILDTKVSVDRMVMDTNYFGPVALTKALIPSMIKNRRGHIVVISSVQGKISI 185          
The following BLAST results are available for this feature:
BLAST of FC931422 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 25
Match NameE-valueIdentityDescription
DRS7B_RAT4.704e-1132.10Dehydrogenase/reductase SDR family member 7B OS=Ra... [more]
DHR13_MOUSE4.704e-1132.26Dehydrogenase/reductase SDR family member 13 OS=Mu... [more]
DHKR_STRCM4.704e-1131.48Monensin polyketide synthase putative ketoacyl red... [more]
DRS7B_BOVIN6.144e-1131.06Dehydrogenase/reductase SDR family member 7B OS=Bo... [more]
DRS7B_XENTR8.024e-1130.06Dehydrogenase/reductase SDR family member 7B OS=Xe... [more]

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Properties
Property NameValue
Genbank descriptionC34104H11EF PostHarvP1 Citrus clementina cDNA clone C34104H11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931422 ID=FC931422; Name=FC931422; organism=Citrus clementina; type=EST; length=685bp
ATCTTGGCACACTATATTCTATATTCAGGTATGCAGTTGTTACAGGAGCA
AATAAGGGAATTGGGTATGAAGTAGTGAGGCAATTGGCTTTAAATGGGGT
CATTACGGTACTAACAGCCAGAGATGAGAAGGGGGGTCTTGAAGCTGTTG
AAAAACTCAAACACTCTGGCTTTGATAATGTGATCTTTCATCAGCTTGAT
GTTGCAGACCCTGCTGCTATTCACTCTGTAGCTGATTTCATTCGAAGTCA
TTTTGGAAAGCTTGATATTTTGGTAAATAATGCAGGGATTACTGGAATCA
GTTCGGATGCTGATACTTTGTCAGGTTTTATTGAGGAAGGTGTTGCAAGA
GGAAAAATGACTCAAACTTATGAGTCAGCTGAAAAGTGCCTGCAAACAAA
CTACTTGGGGGCCAAAAGAATGTGTGAAGCACTCATTCCTCTCCTCCAGT
TATCCGATTCAGCAAGAATTGTTAATGTATCCTCTTCCTTGGGAAAGTTG
ATGGTAAAACAGTTTTACAGCCCTTTATAAAATTGAACTAGTTGACATTC
AGGTAGTAATTAAGCCCAATTTGGCCGCTAAATTTTGCTTCCACTGCATC
TGATATTCCCTTATAATTACCTGTAGATCGATATTGGAGTACTCCTTGTC
TCNAATTTTAATTATGATTAAGTTCATTGGAATCA
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