FC931423

Overview
NameFC931423
Unique NameFC931423
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length726
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig14162 contig Ccv1_Contig14162:2..727. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC931423 vs. ExPASy Swiss-Prot
Match: C83A1_ARATH (Cytochrome P450 83A1 OS=Arabidopsis thaliana GN=CYP83A1 PE=1 SV=2)

HSP 1 Score: 73.559 bits (179), Expect = 1.252e-12
Identity = 62/206 (30.10%), Postives = 97/206 (47.09%), Query Frame = 1
Query:   43 LSLLIVYFFWRIIAKSINKREKNTAPEPSGAWPLIGHLPLLNGQEPICKILGALADKYGPIYSLRLGKHPILIVSGWEIVKDCFTTNDRILATRAKIVAGKYMGYDNAIFALAPYGQYWRDIRKIATTELLSSHRLELLKHVRYSEVDTFIKDLYSLCSENAFNPAKVV-ISKLIEQLTFNISLKLIAGKRFSAKDYEEQGSEAWR 657
            L+ ++++F ++   K   KR K   P PS   P+IG+L  L    P  +     A KYGPI S R+G   ++++S  E+ K+   T D   A R      +++ Y     AL  Y  Y+R+IRK+    L S  R+   KHVR  E    +  +       A + ++VV IS+L+   T ++  +   GK+     Y E G E  R
Sbjct:   11 LAAVLLFFLYQ---KPKTKRYK-LPPGPSPL-PVIGNLLQLQKLNPQ-RFFAGWAKKYGPILSYRIGSRTMVVISSAELAKELLKTQDVNFADRPPHRGHEFISYGRRDMALNHYTPYYREIRKMGMNHLFSPTRVATFKHVREEEARRMMDKI-----NKAADKSEVVDISELMLTFTNSVVCRQAFGKK-----YNEDGEEMKR 200          
BLAST of FC931423 vs. ExPASy Swiss-Prot
Match: C75A4_GENTR (Flavonoid 3',5'-hydroxylase OS=Gentiana triflora GN=CYP75A4 PE=2 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 1.635e-12
Identity = 52/206 (25.24%), Postives = 94/206 (45.63%), Query Frame = 1
Query:   10 STSFTPAIFELLSLLIVYFFWRIIA-----KSINKREKNTAPEPSGAWPLIGHLPLLNGQEPICKILGALADKYGPIYSLRLGKHPILIVSGWEIVKDCFTTNDRILATRAKIVAGKYMGYDNAIFALAPYGQYWRDIRKIATTELLSSHRLELLKHVRYSEVDTFIKDLYSLCSENAFNPAKVVISKLIEQLTFNISLKLIAGKR 612
            S  +T     L + L ++F  + +      K+   R +   P P+G WP++G LPLL     +      +A KYG +  L++G H + I S  +  K    T D   + R       ++ Y+      A YG  W+ +RK++   +L    LE    VR +E+   +K ++    E++ N   V+IS+++     N+  ++I  +R
Sbjct:    2 SPIYTTLTLHLATALFLFFHVQKLVHYLHGKATGHRCRRLPPGPTG-WPILGALPLLGNMPHVT--FANMAKKYGSVMYLKVGSHGLAIASTPDAAKAFLKTLDLNFSNRPPNAGATHLAYNAQDMVFAHYGPKWKLLRKLSNLHMLGGKALENWADVRKTELGYMLKAMF----ESSQNNEPVMISEMLTYAMANMLSQVILSRR 200          
BLAST of FC931423 vs. ExPASy Swiss-Prot
Match: C76C2_ARATH (Cytochrome P450 76C2 OS=Arabidopsis thaliana GN=CYP76C2 PE=2 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 3.643e-12
Identity = 59/203 (29.06%), Postives = 101/203 (49.75%), Query Frame = 1
Query:   19 FTPAIFELLSLLIVYFFWRIIAKSINKREKNTAPEPSGA--WPLIGHLPLLNGQEPICKILGALADKYGPIYSLRLGKHPILIVSGWEIVKDCFTTNDRILATRAKIVAGKYMGYDN-AIFALAPYGQYWRDIRKIATTELLSSHRLELLKHVRYSEVDTFIKDLYSLCSENAFNPAKVVISKLIEQLTFNISLKLIAGKRFS 618
            F  A+F L    ++ FF      +  +  +   P P G    P+IG++ L+ G+ P       L+  YGPI SL+ G    ++V+  E  ++   T D+IL++R    + + + +D  ++  L P    WR +RK++ T+L S  R+E  K +R ++V    K+L S  SE++     V IS+     TF  +L +I+   FS
Sbjct:    5 FEQALFPLFCF-VLSFFIIFFTTTRPRSSRKVVPSPPGPPRLPIIGNIHLV-GRNPHHSFAD-LSKTYGPIMSLKFGSLNTVVVTSPEAAREVLRTYDQILSSRTPTNSIRSINHDKVSVVWLPPSSSRWRLLRKLSATQLFSPQRIEATKTLRENKV----KELVSFMSESSEREEAVDISR----ATFITALNIISNILFS 196          
BLAST of FC931423 vs. ExPASy Swiss-Prot
Match: C71BO_ARATH (Cytochrome P450 71B24 OS=Arabidopsis thaliana GN=CYP71B24 PE=2 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 3.643e-12
Identity = 52/180 (28.89%), Postives = 86/180 (47.78%), Query Frame = 1
Query:   76 IIAKSINKREKNTAPEPSGAWPLIGHLPLLNGQEPICKILGALADKYGPIYSLRLGKHPILIVSGWEIVKDCFTTNDRILATRAKIVAGKYMGYDNAIFALAPYGQYWRDIRKIATTELLSSHRLELLKHVRYSEVDTFIKDLYSLCSENAFNPAKVVISKLIEQLTFNISLKLIAGKRF 615
            II K I    +N  P P    P+IG+L  L G    C  L  L+ K+GP+  LRLG   ++++S  E  ++    +D    TR        +  D     LAPYG+  R++RK++  +  S+ ++   +++R  E D  +K L     E A   + V +S+ +  L  +I  +   G+RF
Sbjct:   14 IIIKKIKDSNRNLPPSPLKL-PVIGNLYQLRGLFHKC--LHDLSKKHGPVLLLRLGFLDMVVISSTEAAEEALKVHDLECCTRPITNVTSKLWRDGQDIGLAPYGESLRELRKLSFLKFFSTTKVRSFRYIREEENDLMVKKL----KEAALKKSSVDLSQTLFGLVGSIIFRSAFGQRF 186          
BLAST of FC931423 vs. ExPASy Swiss-Prot
Match: C71C3_MAIZE (Cytochrome P450 71C3 OS=Zea mays GN=CYP71C3 PE=2 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 4.757e-12
Identity = 50/171 (29.24%), Postives = 80/171 (46.78%), Query Frame = 1
Query:  118 PEPSGAWPLIGHLPLLNGQEPICKILGALADKYGP--IYSLRLGKHPILIVSGWEIVKDCFTTNDRILATRAKIVAGKYMGYDNAIFALAPYGQYWRDIRKIATTELLSSHRLELLKHVRYSEVDTFIKDLYSLCSENAFNPAKVVISKLIEQLTFNISLKLIAGKRFSAK 624
            P P G  P++GHL  +  Q  I   L  L  KYG      LR G  P LIVS     +    T+D I A+R   +A   + Y+    A +P G+YW+  RK+  T LLS+ ++   +H R  EV   + +L    +++      V +S+++   T ++  + + G     K
Sbjct:   58 PSPPGTLPIVGHLHHIGPQTHIS--LQELVAKYGHNGFLFLRAGAVPTLIVSSPSAAEAVMRTHDHICASRPWSMASHILRYNTCDVAFSPLGEYWQQTRKLMNTHLLSNKKVYSFRHGREEEVCLVVDNLREAAAKSP--STAVDMSEVLAAYTNDVVSRSVLGSTHRKK 224          
BLAST of FC931423 vs. ExPASy Swiss-Prot
Match: C75A5_EUSGR (Flavonoid 3',5'-hydroxylase OS=Eustoma grandiflorum GN=CYP75A5 PE=2 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 6.213e-12
Identity = 53/199 (26.63%), Postives = 92/199 (46.23%), Query Frame = 1
Query:   55 IVYFFWRIIAKSINKREKNTAPEPSGAWPLIGHLPLLNGQEPICKILGALADKYGPIYSLRLGKHPILIVSGWEIVKDCFTTNDRILATRAKIVAGKYMGYDNAIFALAPYGQYWRDIRKIATTELLSSHRLELLKHVRYSEVDTFIKDLYSLCSENAFNPAKVVISKLIEQLTFNISLKLIAGKRFSAKDYEEQGSEA 651
            +V + W      +N R     P P G WP++G LPLL     +   L  +A KYGP+  L++G   + + S  E  K    T D   + R       ++ Y+      A YG  W+ +RK++   +L    L+  + VR  E+      LY++ +E+  +   VV+S+++     N+  +++  KR     +  QGSE+
Sbjct:   24 LVQYLW------MNSRRHRLPPGPIG-WPVLGALPLLGTMPHVA--LANMAKKYGPVMYLKVGSCGLAVASTPEAAKAFLKTLDMNFSNRPPNAGATHLAYNAQDMVFADYGPRWKLLRKLSNIHILGGKALQGWEEVRKKELGYM---LYAM-AESGRHGQPVVVSEMLTYAMANMLGQVMLSKRV----FGSQGSES 205          
BLAST of FC931423 vs. ExPASy Swiss-Prot
Match: C71AF_ARATH (Cytochrome P450 71A15 OS=Arabidopsis thaliana GN=CYP71A15 PE=2 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 6.213e-12
Identity = 49/195 (25.13%), Postives = 94/195 (48.21%), Query Frame = 1
Query:   40 LLSLLIVYFFWRIIAKSINKREKNTAPEPSGAW--PLIGHLPLLNGQEPICKILGALADKYGPIYSLRLGKHPILIVSGWEIVKDCFTTNDRILATRAKIVAGKYMGYDNAIFALAPYGQYWRDIRKIATTELLSSHRLELLKHVRYSEVDTFIKDLYSLCSENAFNPAKVVISKLIEQLTFNISLKLIAGKRFS 618
            ++SL +      ++ K +  R       P   W  P+IG+L  L+      + L +L+ +YGP+  L  G+ PIL+VS  ++  D   T+D  +A R ++   + +         +PYG YWR I+ +    LL+   ++    VR  E    ++ +    S++    + + +SKL+  LT +++ ++  GK+ S
Sbjct:    5 IISLCLATILAFLLLKPLLNRTVAKDNLPPSPWRVPVIGNLHQLSLHPH--RSLRSLSHRYGPLMLLHFGRVPILVVSSSDVAHDLMKTHDLKVANRPRLKVIETILNGGREVVFSPYGDYWRQIKTVCVVHLLNKKMVQSFAKVREEERSVMMEKVEKASSDS----SPLNLSKLLITLTSDVASRVSFGKKHS 193          
BLAST of FC931423 vs. ExPASy Swiss-Prot
Match: C99A1_SORBI (Cytochrome P450 CYP99A1 (Fragment) OS=Sorghum bicolor GN=CYP99A1 PE=2 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.384e-11
Identity = 42/127 (33.07%), Postives = 68/127 (53.54%), Query Frame = 1
Query:  124 PSGAW--PLIGHLPLLNGQEPICKILGALADKYGPIYSLRLGKHPILIVSGWEIVKDCFTTNDRILATRAKIVAGKYMGYDNAIFALAPYGQYWRDIRKIATTELLSSHRLELLKHVRYSEVDTFIK 498
            P G W  PLIG+L  L   +P    L  LA K+GP+  LRLG+   +++S     ++     D   A+R  ++    + Y +   + APYG  WR +RK+  +ELL++H++  L  VR SE  + ++
Sbjct:   28 PPGPWRLPLIGNLLHLATSQPHVA-LRDLAMKHGPVMYLRLGQVDAVVISSPAAAQEVLRDKDTTFASRPSLLVADIILYGSMDMSFAPYGGNWRMLRKLCMSELLNTHKVRQLAAVRDSETLSLVR 153          
BLAST of FC931423 vs. ExPASy Swiss-Prot
Match: C71BW_ARATH (Cytochrome P450 71B35 OS=Arabidopsis thaliana GN=CYP71B35 PE=2 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.384e-11
Identity = 45/166 (27.11%), Postives = 84/166 (50.60%), Query Frame = 1
Query:  118 PEPSGAWPLIGHLPLLNGQEPICKILGALADKYGPIYSLRLGKHPILIVSGWEIVKDCFTTNDRILATRAKIVAGKYMGYDNAIFALAPYGQYWRDIRKIATTELLSSHRLELLKHVRYSEVDTFIKDLYSLCSENAFNPAKVVISKLIEQLTFNISLKLIAGKRF 615
            P P G +P+IG+L  + G+ P  + L  L+ KYGP+  L LG+ P ++VS  +  +     +D    TR  +   + + Y+    A +PY  YW+++RK+   EL S+ ++  ++ ++  EV   I  +    +E+A     V ++    +LT ++  +   G  F
Sbjct:   32 PCPPG-FPIIGNLHQI-GELPH-QTLWKLSKKYGPVMHLMLGRVPTVVVSSSDTARQVLRVHDLHCCTRPSLSGPRELSYNYLDIAFSPYDDYWKEVRKLCVQELFSTKQVHSIQPIKDEEVKKMIDSI----AESASQKNPVNLNNKCLELTVSVVCRTAFGVSF 190          
BLAST of FC931423 vs. ExPASy Swiss-Prot
Match: C83B1_ARATH (Cytochrome P450 83B1 OS=Arabidopsis thaliana GN=CYP83B1 PE=1 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 1.808e-11
Identity = 52/199 (26.13%), Postives = 87/199 (43.72%), Query Frame = 1
Query:   61 YFFWRIIAKSINKREKNTAPEPSGAWPLIGHLPLLNGQEPICKILGALADKYGPIYSLRLGKHPILIVSGWEIVKDCFTTNDRILATRAKIVAGKYMGYDNAIFALAPYGQYWRDIRKIATTELLSSHRLELLKHVRYSEVDTFIKDLYSLCSENAFNPAKVVISKLIEQLTFNISLKLIAGKRFSAKDYEEQGSEAWR 657
            +FF R    S  K+     P P G  P+IG+L  +    P    L  L+  YGPI+++++G   + ++S  E+ K+   T D     R  +   + M Y         Y  Y+R++RK+    L S +R+   + VR  E    +  +Y    ++      V +S+L+   T  +  +   GKR     Y E G+E  R
Sbjct:   16 FFFLR----STTKKSLRLPPGPKGL-PIIGNLHQMEKFNPQ-HFLFRLSKLYGPIFTMKIGGRRLAVISSAELAKELLKTQDLNFTARPLLKGQQTMSYQGRELGFGQYTAYYREMRKMCMVNLFSPNRVASFRPVREEECQRMMDKIYKAADQS----GTVDLSELLLSFTNCVVCRQAFGKR-----YNEYGTEMKR 199          
The following BLAST results are available for this feature:
BLAST of FC931423 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 96
Match NameE-valueIdentityDescription
C83A1_ARATH1.252e-1230.10Cytochrome P450 83A1 OS=Arabidopsis thaliana GN=CY... [more]
C75A4_GENTR1.635e-1225.24Flavonoid 3',5'-hydroxylase OS=Gentiana triflora G... [more]
C76C2_ARATH3.643e-1229.06Cytochrome P450 76C2 OS=Arabidopsis thaliana GN=CY... [more]
C71BO_ARATH3.643e-1228.89Cytochrome P450 71B24 OS=Arabidopsis thaliana GN=C... [more]
C71C3_MAIZE4.757e-1229.24Cytochrome P450 71C3 OS=Zea mays GN=CYP71C3 PE=2 S... [more]
C75A5_EUSGR6.213e-1226.63Flavonoid 3',5'-hydroxylase OS=Eustoma grandifloru... [more]
C71AF_ARATH6.213e-1225.13Cytochrome P450 71A15 OS=Arabidopsis thaliana GN=C... [more]
C99A1_SORBI1.384e-1133.07Cytochrome P450 CYP99A1 (Fragment) OS=Sorghum bico... [more]
C71BW_ARATH1.384e-1127.11Cytochrome P450 71B35 OS=Arabidopsis thaliana GN=C... [more]
C83B1_ARATH1.808e-1126.13Cytochrome P450 83B1 OS=Arabidopsis thaliana GN=CY... [more]

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Properties
Property NameValue
Genbank descriptionC34104H12EF PostHarvP1 Citrus clementina cDNA clone C34104H12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931423 ID=FC931423; Name=FC931423; organism=Citrus clementina; type=EST; length=726bp
GGGATGGATTCTACTTCTTTCACCCCAGCAATTTTTGAGCTCTTATCTCT
GCTAATTGTCTATTTTTTTTGGAGAATCATAGCAAAATCTATAAACAAAA
GAGAGAAAAATACTGCCCCCGAGCCATCTGGGGCATGGCCACTCATCGGC
CATTTGCCTCTGCTAAATGGCCAAGAACCAATTTGCAAAATACTTGGAGC
ATTGGCCGATAAATATGGGCCCATCTATTCTCTTAGACTTGGCAAGCATC
CCATATTGATTGTGAGCGGTTGGGAAATTGTGAAGGATTGCTTCACTACC
AATGACAGAATTCTGGCTACAAGGGCAAAAATTGTAGCAGGCAAGTATAT
GGGTTATGACAACGCCATTTTTGCACTTGCTCCCTACGGTCAGTACTGGC
GTGATATTCGCAAAATAGCCACCACAGAGCTTCTCTCAAGTCACCGGCTT
GAATTGCTGAAGCACGTTCGCTACTCTGAAGTTGACACTTTCATCAAAGA
TTTGTACTCACTTTGCTCAGAAAACGCATTCAATCCTGCGAAGGTGGTGA
TCAGCAAGTTAATCGAGCAGTTAACTTTCAATATAAGCCTGAAACTGATA
GCTGGGAAGCGATTTTCAGCTAAAGATTATGAGGAACAAGGCAGCGAGGC
TTGGCGTATNCATAGAGCAATAAAGAAGCACGCACCTATTCGGGTTTTCG
TCTGGGAGATGCCATACATGGCTTGA
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