FC931423

Overview
NameFC931423
Unique NameFC931423
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length726
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig14162 contig Ccv1_Contig14162:2..727. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC931423 vs. ExPASy Swiss-Prot
Match: C71BU_ARATH (Cytochrome P450 71B31 OS=Arabidopsis thaliana GN=CYP71B31 PE=2 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 1.808e-11
Identity = 53/196 (27.04%), Postives = 89/196 (45.41%), Query Frame = 1
Query:   43 LSLLIVYFFWRIIAKSINKREKNTAPEPSGAWPLIGHLPLLNGQEPICKILGALADKYGPIYSLRLGKHPILIVSGWEIVKDCFTTNDRILATRAKIVAGKYMGYDNAIFALAPYGQYWRDIRKIATTELLSSHRLELLKHVRYSEVDTFIKDLYSLCSENAFNPAKVVISKLIEQLTFNISLKLIAGKRFSAKDY 630
            L LL ++  + I+ K++    K   P P+G  PLIG+L  L     +   L  L+ ++GP+  +R G  P+ + S  E  K+   T+D     R K+VA     +         YG+ WR+++K    EL S  + +  +++R  E D  +K +    S  A     V + K +   T +I  +   G+ F   DY
Sbjct:    5 LGLLFLFPLFFILFKNLLPPRKKLPPGPTGL-PLIGNLHQLG--RLLHSSLHKLSLEHGPVMLVRWGVVPMAVFSSNEAAKEVLKTHDLETCNRPKLVANGLFTHGYKDIGFTQYGEEWREMKKFVGLELFSPKKHKSFRYIREEEGDLLVKKI----SNYAQTQTLVDLRKSLFSYTASIIFREAFGQNFRECDY 193          
BLAST of FC931423 vs. ExPASy Swiss-Prot
Match: C76C1_ARATH (Cytochrome P450 76C1 OS=Arabidopsis thaliana GN=CYP76C1 PE=2 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 3.084e-11
Identity = 46/150 (30.67%), Postives = 83/150 (55.33%), Query Frame = 1
Query:  139 PLIGHLPLLNGQEPICKILGALADKYGPIYSLRLGKHPILIVSGWEIVKDCFTTNDRILATRAKIVAGKYMGYDNAIFALAPYGQ-YWRDIRKIATTELLSSHRLELLKHVRYSEVDTFIKDLYSLCSENAFNPAKVVISKLIEQLTFNI 585
            P+IG++ L+ G+ P  +    L+  YGP+ SL+LG    ++++  E  ++   T+D+IL+ R+   A + + + +A     P     WR +R+++ T+LLS  R+E  K +R ++V    K+L S  SE++     V IS++    T NI
Sbjct:   46 PIIGNIHLV-GKHPH-RSFAELSKTYGPVMSLKLGSLNTVVIASPEAAREVLRTHDQILSARSPTNAVRSINHQDASLVWLPSSSARWRLLRRLSVTQLLSPQRIEATKALRMNKV----KELVSFISESSDREESVDISRVAFITTLNI 189          
BLAST of FC931423 vs. ExPASy Swiss-Prot
Match: C71C4_MAIZE (Cytochrome P450 71C4 OS=Zea mays GN=CYP71C4 PE=2 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 5.260e-11
Identity = 48/165 (29.09%), Postives = 78/165 (47.27%), Query Frame = 1
Query:  118 PEPSGAWPLIGHLPLLNGQEPICKILGALADKYGP-IYSLRLGKHPILIVSGWEIVKDCFTTNDRILATRAKIVAGKYMGYDNAIFALAPYGQYWRDIRKIATTELLSSHRLELLKHVRYSEVDTFIKDLYSLCSENAFNPAKVVISKLIEQLTFNISLKLIAGK 609
            P P    P+IGHL L+ G  P    L ALA +YGP +  LRLG  P ++VS   + +    T D + ++R + +    + Y       APYG ++R  RK+ T  LL++ ++   +  R  EV    +         A     V +S+L+     N+  + ++GK
Sbjct:   69 PSPPMKLPIIGHLHLM-GDIPYVS-LAALATRYGPDLMLLRLGAVPTVVVSSPRVAEAVLRTYDHVFSSRPRSLVSDIIMYGATDSCFAPYGDHFRKARKLVTVHLLNASKVRSQRPAREEEV----RGALDRVRRAAAAREPVDMSELLHSFVNNLVCRAVSGK 227          
BLAST of FC931423 vs. ExPASy Swiss-Prot
Match: C75A7_EUSGR (Flavonoid 3',5'-hydroxylase OS=Eustoma grandiflorum GN=CYP75A7 PE=2 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 6.869e-11
Identity = 52/199 (26.13%), Postives = 91/199 (45.73%), Query Frame = 1
Query:   55 IVYFFWRIIAKSINKREKNTAPEPSGAWPLIGHLPLLNGQEPICKILGALADKYGPIYSLRLGKHPILIVSGWEIVKDCFTTNDRILATRAKIVAGKYMGYDNAIFALAPYGQYWRDIRKIATTELLSSHRLELLKHVRYSEVDTFIKDLYSLCSENAFNPAKVVISKLIEQLTFNISLKLIAGKRFSAKDYEEQGSEA 651
            +V + W      +N R     P P G WP++G L LL     +   L  +A KYGP+  L++G   + + S  E  K    T D   + R       ++ Y+      A YG  W+ +RK++   +L    L+  + VR  E+      LY++ +E+  +   VV+S+++     N+  +++  KR     +  QGSE+
Sbjct:   24 LVQYLW------MNSRRHRLPPGPIG-WPVLGALRLLGTMPHVA--LANMAKKYGPVMYLKVGSCGLAVASTPEAAKAFLKTLDMNFSNRPPNAGATHLAYNAQDMVFADYGPRWKLLRKLSNIHILGGKALQGWEEVRKKELGYM---LYAM-AESGRHGQPVVVSEMLTYAMANMLGQVMLSKRV----FGSQGSES 205          
BLAST of FC931423 vs. ExPASy Swiss-Prot
Match: C98A3_ARATH (Cytochrome P450 98A3 OS=Arabidopsis thaliana GN=CYP98A3 PE=1 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 8.972e-11
Identity = 51/202 (25.25%), Postives = 93/202 (46.04%), Query Frame = 1
Query:   49 LLIVYFFWRIIAKSINKREKNTAPEPSGAWPLIGHLPLLNGQEPICKILGALADKYGPIYSLRLGKHPILIVSGWEIVKDCFTTNDRILATRAKIVAGKYMGYDNAIFALAPYGQYWRDIRKIATTELLSSHRLELLKHVRYSEVDTFIKDLYSLCSENAFNPAKVVISKLIEQLTFNISLKLIAGKRFSAKD--YEEQGSE 648
            L+ V     +++  + +R +   P      P++G+L  +      C      A  YGPI S+ +G    ++VS  E+ K+    +D+ LA R +  + +    +      A YG ++  +RK+ T EL +  RLE L+ +R  EV   ++ ++  C+        + + K +  + FN   +L  GKRF   +   +EQG E
Sbjct:    5 LIAVATIAAVVSYKLIQRLRYKFPPGPSPKPIVGNLYDIKPVRFRCYY--EWAQSYGPIISVWIGSILNVVVSSAELAKEVLKEHDQKLADRHRNRSTEAFSRNGQDLIWADYGPHYVKVRKVCTLELFTPKRLESLRPIREDEVTAMVESVFRDCNLPENRAKGLQLRKYLGAVAFNNITRLAFGKRFMNAEGVVDEQGLE 204          
BLAST of FC931423 vs. ExPASy Swiss-Prot
Match: C75A3_PETHY (Flavonoid 3',5'-hydroxylase 2 OS=Petunia hybrida GN=CYP75A3 PE=2 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 8.972e-11
Identity = 45/165 (27.27%), Postives = 78/165 (47.27%), Query Frame = 1
Query:  118 PEPSGAWPLIGHLPLLNGQEPICKILGALADKYGPIYSLRLGKHPILIVSGWEIVKDCFTTNDRILATRAKIVAGKYMGYDNAIFALAPYGQYWRDIRKIATTELLSSHRLELLKHVRYSEVDTFIKDLYSLCSENAFNPAKVVISKLIEQLTFNISLKLIAGKR 612
            P P G WP+IG LPLL     +   L  +A KYG I  L++G   +++ S  +  K    T D   + R       ++ Y       A YG  W+ +RK++   +L    LE   +VR +E+   +K ++ +  E      +VV+++++     N+  ++I  KR
Sbjct:   35 PGPRG-WPVIGALPLLGAMPHVS--LAKMAKKYGAIMYLKVGTCGMVVASTPDAAKAFLKTLDLNFSNRPPNAGATHLAYGAQDMVFAHYGPRWKLLRKLSNLHMLGGKALENWANVRANELGHMLKSMFDMSREG----ERVVVAEMLTFAMANMIGQVILSKR 192          
The following BLAST results are available for this feature:
BLAST of FC931423 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 96
Match NameE-valueIdentityDescription
C71BU_ARATH1.808e-1127.04Cytochrome P450 71B31 OS=Arabidopsis thaliana GN=C... [more]
C76C1_ARATH3.084e-1130.67Cytochrome P450 76C1 OS=Arabidopsis thaliana GN=CY... [more]
C71C4_MAIZE5.260e-1129.09Cytochrome P450 71C4 OS=Zea mays GN=CYP71C4 PE=2 S... [more]
C75A7_EUSGR6.869e-1126.13Flavonoid 3',5'-hydroxylase OS=Eustoma grandifloru... [more]
C98A3_ARATH8.972e-1125.25Cytochrome P450 98A3 OS=Arabidopsis thaliana GN=CY... [more]
C75A3_PETHY8.972e-1127.27Flavonoid 3',5'-hydroxylase 2 OS=Petunia hybrida G... [more]

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Properties
Property NameValue
Genbank descriptionC34104H12EF PostHarvP1 Citrus clementina cDNA clone C34104H12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931423 ID=FC931423; Name=FC931423; organism=Citrus clementina; type=EST; length=726bp
GGGATGGATTCTACTTCTTTCACCCCAGCAATTTTTGAGCTCTTATCTCT
GCTAATTGTCTATTTTTTTTGGAGAATCATAGCAAAATCTATAAACAAAA
GAGAGAAAAATACTGCCCCCGAGCCATCTGGGGCATGGCCACTCATCGGC
CATTTGCCTCTGCTAAATGGCCAAGAACCAATTTGCAAAATACTTGGAGC
ATTGGCCGATAAATATGGGCCCATCTATTCTCTTAGACTTGGCAAGCATC
CCATATTGATTGTGAGCGGTTGGGAAATTGTGAAGGATTGCTTCACTACC
AATGACAGAATTCTGGCTACAAGGGCAAAAATTGTAGCAGGCAAGTATAT
GGGTTATGACAACGCCATTTTTGCACTTGCTCCCTACGGTCAGTACTGGC
GTGATATTCGCAAAATAGCCACCACAGAGCTTCTCTCAAGTCACCGGCTT
GAATTGCTGAAGCACGTTCGCTACTCTGAAGTTGACACTTTCATCAAAGA
TTTGTACTCACTTTGCTCAGAAAACGCATTCAATCCTGCGAAGGTGGTGA
TCAGCAAGTTAATCGAGCAGTTAACTTTCAATATAAGCCTGAAACTGATA
GCTGGGAAGCGATTTTCAGCTAAAGATTATGAGGAACAAGGCAGCGAGGC
TTGGCGTATNCATAGAGCAATAAAGAAGCACGCACCTATTCGGGTTTTCG
TCTGGGAGATGCCATACATGGCTTGA
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