FC931427

Overview
NameFC931427
Unique NameFC931427
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length640
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig10254 contig Ccv1_Contig10254:232..871. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of FC931427 vs. ExPASy Swiss-Prot
Match: SAHH_AGRT5 (Adenosylhomocysteinase OS=Agrobacterium tumefaciens (strain C58 / ATCC 33970) GN=ahcY PE=3 SV=1)

HSP 1 Score: 219.164 bits (557), Expect = 1.453e-56
Identity = 117/210 (55.71%), Postives = 138/210 (65.71%), Query Frame = 3 
Query:    3 MPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHXXXXXXXXXXXXXXWKGETLQEYWWCTEKALDWGPGGGPDLIVDDGGDATLLIHEGVKAEEIYEKTGKLPDPASTDNAEFQIVLTIIRDGLKADPKKYHKMKERLVGVSEETTTGVKRFYQMQENGTLLFPAINVNDSVTKSKFDNLYGCR 632
            MPGLM+CR EFG S+P KGA+ITGSLHMTIQT VLIETL  LGAE+RW SCNIFSTQDH               KGE+L EYW  T+K   W  GG  ++I+DDGGDAT+ I  G +AE        L +P S    E +I+   I   LKA P  + K ++ L GV+EETTTGV R Y + + G L FPAINVNDSVTKSKFDN YGC+
Sbjct:   29 MPGLMSCRKEFGESKPLKGARITGSLHMTIQTGVLIETLKELGAEIRWASCNIFSTQDHAAAAIAAAGIPVFAVKGESLTEYWEYTDKIFQWTDGGLSNMILDDGGDATMYILLGARAE---AGEDVLSNPGS---EEEEILFAQINKRLKASPGWFTKQRDALKGVTEETTTGVHRLYDLAKKGLLPFPAINVNDSVTKSKFDNKYGCK 232
[Close]
BLAST of FC931427 vs. ExPASy Swiss-Prot
Match: SAHH_MESSB (Adenosylhomocysteinase OS=Mesorhizobium sp. (strain BNC1) GN=ahcY PE=3 SV=1)

HSP 1 Score: 218.394 bits (555), Expect = 2.479e-56
Identity = 113/210 (53.81%), Postives = 140/210 (66.67%), Query Frame = 3 
Query:    3 MPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHXXXXXXXXXXXXXXWKGETLQEYWWCTEKALDWGPGGGPDLIVDDGGDATLLIHEGVKAEEIYEKTGKLPDPASTDNAEFQIVLTIIRDGLKADPKKYHKMKERLVGVSEETTTGVKRFYQMQENGTLLFPAINVNDSVTKSKFDNLYGCR 632
            MPGLMACR EFG ++P KGA+ITGSLHMTIQTAVLIETL +LGAEVRW SCNIFSTQDH               KGETL+EYW  T++   W  G   ++I+DDGGDAT+ I  G +AE   +        ++ D  E +I+   I+  +   P  + + +  + GV+EETTTGV R YQ+Q+ G L FPAINVNDSVTKSKFDN YGC+
Sbjct:   28 MPGLMACREEFGEAKPLKGARITGSLHMTIQTAVLIETLKSLGAEVRWASCNIFSTQDHAAAAIAETGTPVFAVKGETLEEYWTYTDRIFQWPDGQPSNMILDDGGDATMYILLGARAEAGEDVL------SNPDGEEEEILFQQIKKRMAETPGFFTRQRAAIRGVTEETTTGVNRLYQLQKKGLLPFPAINVNDSVTKSKFDNKYGCK 231
[Close]
BLAST of FC931427 vs. ExPASy Swiss-Prot
Match: SAHH_BRUSU (Adenosylhomocysteinase OS=Brucella suis GN=ahcY PE=3 SV=1)

HSP 1 Score: 217.624 bits (553), Expect = 4.229e-56
Identity = 116/210 (55.24%), Postives = 139/210 (66.19%), Query Frame = 3 
Query:    3 MPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHXXXXXXXXXXXXXXWKGETLQEYWWCTEKALDWGPGGGPDLIVDDGGDATLLIHEGVKAEEIYEKTGKLPDPASTDNAEFQIVLTIIRDGLKADPKKYHKMKERLVGVSEETTTGVKRFYQMQENGTLLFPAINVNDSVTKSKFDNLYGCR 632
            MPGLMA R EFG SQP KGA+I+GSLHMTIQTAVLIETL  LGAEVRW SCNIFSTQDH               KGETL+EYW  T++   W  G   ++I+DDGGDAT+ I  G +AE        L +P S    E +++   I+  + A P  + K +  + GV+EETTTGV R YQ+Q+ G L FPAINVNDSVTKSKFDN YGC+
Sbjct:   29 MPGLMAAREEFGKSQPLKGARISGSLHMTIQTAVLIETLKVLGAEVRWASCNIFSTQDHAAAAIAATGTPVFAVKGETLEEYWTYTDQIFQWPDGEPSNMILDDGGDATMYILIGARAE---AGEDVLSNPQS---EEEEVLFAQIKKRMAATPGFFTKQRAAIKGVTEETTTGVNRLYQLQKKGLLPFPAINVNDSVTKSKFDNKYGCK 232
[Close]
BLAST of FC931427 vs. ExPASy Swiss-Prot
Match: SAHH_BRUSI (Adenosylhomocysteinase OS=Brucella suis (strain ATCC 23445 / NCTC 10510) GN=ahcY PE=3 SV=1)

HSP 1 Score: 217.624 bits (553), Expect = 4.229e-56
Identity = 116/210 (55.24%), Postives = 139/210 (66.19%), Query Frame = 3 
Query:    3 MPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHXXXXXXXXXXXXXXWKGETLQEYWWCTEKALDWGPGGGPDLIVDDGGDATLLIHEGVKAEEIYEKTGKLPDPASTDNAEFQIVLTIIRDGLKADPKKYHKMKERLVGVSEETTTGVKRFYQMQENGTLLFPAINVNDSVTKSKFDNLYGCR 632
            MPGLMA R EFG SQP KGA+I+GSLHMTIQTAVLIETL  LGAEVRW SCNIFSTQDH               KGETL+EYW  T++   W  G   ++I+DDGGDAT+ I  G +AE        L +P S    E +++   I+  + A P  + K +  + GV+EETTTGV R YQ+Q+ G L FPAINVNDSVTKSKFDN YGC+
Sbjct:   29 MPGLMAAREEFGKSQPLKGARISGSLHMTIQTAVLIETLKVLGAEVRWASCNIFSTQDHAAAAIAATGTPVFAVKGETLEEYWTYTDQIFQWPDGEPSNMILDDGGDATMYILIGARAE---AGEDVLSNPQS---EEEEVLFAQIKKRMAATPGFFTKQRAAIKGVTEETTTGVNRLYQLQKKGLLPFPAINVNDSVTKSKFDNKYGCK 232
[Close]
BLAST of FC931427 vs. ExPASy Swiss-Prot
Match: SAHH_BRUO2 (Adenosylhomocysteinase OS=Brucella ovis (strain ATCC 25840 / 63/290 / NCTC 10512) GN=ahcY PE=3 SV=1)

HSP 1 Score: 217.624 bits (553), Expect = 4.229e-56
Identity = 116/210 (55.24%), Postives = 139/210 (66.19%), Query Frame = 3 
Query:    3 MPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHXXXXXXXXXXXXXXWKGETLQEYWWCTEKALDWGPGGGPDLIVDDGGDATLLIHEGVKAEEIYEKTGKLPDPASTDNAEFQIVLTIIRDGLKADPKKYHKMKERLVGVSEETTTGVKRFYQMQENGTLLFPAINVNDSVTKSKFDNLYGCR 632
            MPGLMA R EFG SQP KGA+I+GSLHMTIQTAVLIETL  LGAEVRW SCNIFSTQDH               KGETL+EYW  T++   W  G   ++I+DDGGDAT+ I  G +AE        L +P S    E +++   I+  + A P  + K +  + GV+EETTTGV R YQ+Q+ G L FPAINVNDSVTKSKFDN YGC+
Sbjct:   29 MPGLMAAREEFGKSQPLKGARISGSLHMTIQTAVLIETLKVLGAEVRWASCNIFSTQDHAAAAIAATGTPVFAVKGETLEEYWTYTDQIFQWPDGEPSNMILDDGGDATMYILIGARAE---AGEDVLSNPQS---EEEEVLFAQIKKRMAATPGFFTKQRAAIKGVTEETTTGVNRLYQLQKKGLLPFPAINVNDSVTKSKFDNKYGCK 232
[Close]
BLAST of FC931427 vs. ExPASy Swiss-Prot
Match: SAHH_BRUME (Adenosylhomocysteinase OS=Brucella melitensis GN=ahcY PE=3 SV=2)

HSP 1 Score: 217.624 bits (553), Expect = 4.229e-56
Identity = 116/210 (55.24%), Postives = 139/210 (66.19%), Query Frame = 3 
Query:    3 MPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHXXXXXXXXXXXXXXWKGETLQEYWWCTEKALDWGPGGGPDLIVDDGGDATLLIHEGVKAEEIYEKTGKLPDPASTDNAEFQIVLTIIRDGLKADPKKYHKMKERLVGVSEETTTGVKRFYQMQENGTLLFPAINVNDSVTKSKFDNLYGCR 632
            MPGLMA R EFG SQP KGA+I+GSLHMTIQTAVLIETL  LGAEVRW SCNIFSTQDH               KGETL+EYW  T++   W  G   ++I+DDGGDAT+ I  G +AE        L +P S    E +++   I+  + A P  + K +  + GV+EETTTGV R YQ+Q+ G L FPAINVNDSVTKSKFDN YGC+
Sbjct:   29 MPGLMAAREEFGKSQPLKGARISGSLHMTIQTAVLIETLKVLGAEVRWASCNIFSTQDHAAAAIAATGTPVFAVKGETLEEYWTYTDQIFQWPDGEPSNMILDDGGDATMYILIGARAE---AGEDVLSNPQS---EEEEVLFAQIKKRMAATPGFFTKQRAAIKGVTEETTTGVNRLYQLQKKGLLPFPAINVNDSVTKSKFDNKYGCK 232
[Close]
BLAST of FC931427 vs. ExPASy Swiss-Prot
Match: SAHH_BRUMB (Adenosylhomocysteinase OS=Brucella melitensis biotype 2 (strain ATCC 23457) GN=ahcY PE=3 SV=1)

HSP 1 Score: 217.624 bits (553), Expect = 4.229e-56
Identity = 116/210 (55.24%), Postives = 139/210 (66.19%), Query Frame = 3 
Query:    3 MPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHXXXXXXXXXXXXXXWKGETLQEYWWCTEKALDWGPGGGPDLIVDDGGDATLLIHEGVKAEEIYEKTGKLPDPASTDNAEFQIVLTIIRDGLKADPKKYHKMKERLVGVSEETTTGVKRFYQMQENGTLLFPAINVNDSVTKSKFDNLYGCR 632
            MPGLMA R EFG SQP KGA+I+GSLHMTIQTAVLIETL  LGAEVRW SCNIFSTQDH               KGETL+EYW  T++   W  G   ++I+DDGGDAT+ I  G +AE        L +P S    E +++   I+  + A P  + K +  + GV+EETTTGV R YQ+Q+ G L FPAINVNDSVTKSKFDN YGC+
Sbjct:   29 MPGLMAAREEFGKSQPLKGARISGSLHMTIQTAVLIETLKVLGAEVRWASCNIFSTQDHAAAAIAATGTPVFAVKGETLEEYWTYTDQIFQWPDGEPSNMILDDGGDATMYILIGARAE---AGEDVLSNPQS---EEEEVLFAQIKKRMAATPGFFTKQRAAIKGVTEETTTGVNRLYQLQKKGLLPFPAINVNDSVTKSKFDNKYGCK 232
[Close]
BLAST of FC931427 vs. ExPASy Swiss-Prot
Match: SAHH_BRUC2 (Adenosylhomocysteinase OS=Brucella canis (strain ATCC 23365 / NCTC 10854) GN=ahcY PE=3 SV=1)

HSP 1 Score: 217.624 bits (553), Expect = 4.229e-56
Identity = 116/210 (55.24%), Postives = 139/210 (66.19%), Query Frame = 3 
Query:    3 MPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHXXXXXXXXXXXXXXWKGETLQEYWWCTEKALDWGPGGGPDLIVDDGGDATLLIHEGVKAEEIYEKTGKLPDPASTDNAEFQIVLTIIRDGLKADPKKYHKMKERLVGVSEETTTGVKRFYQMQENGTLLFPAINVNDSVTKSKFDNLYGCR 632
            MPGLMA R EFG SQP KGA+I+GSLHMTIQTAVLIETL  LGAEVRW SCNIFSTQDH               KGETL+EYW  T++   W  G   ++I+DDGGDAT+ I  G +AE        L +P S    E +++   I+  + A P  + K +  + GV+EETTTGV R YQ+Q+ G L FPAINVNDSVTKSKFDN YGC+
Sbjct:   29 MPGLMAAREEFGKSQPLKGARISGSLHMTIQTAVLIETLKVLGAEVRWASCNIFSTQDHAAAAIAATGTPVFAVKGETLEEYWTYTDQIFQWPDGEPSNMILDDGGDATMYILIGARAE---AGEDVLSNPQS---EEEEVLFAQIKKRMAATPGFFTKQRAAIKGVTEETTTGVNRLYQLQKKGLLPFPAINVNDSVTKSKFDNKYGCK 232
[Close]
BLAST of FC931427 vs. ExPASy Swiss-Prot
Match: SAHH_BRUAB (Adenosylhomocysteinase OS=Brucella abortus GN=ahcY PE=3 SV=1)

HSP 1 Score: 217.624 bits (553), Expect = 4.229e-56
Identity = 116/210 (55.24%), Postives = 139/210 (66.19%), Query Frame = 3 
Query:    3 MPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHXXXXXXXXXXXXXXWKGETLQEYWWCTEKALDWGPGGGPDLIVDDGGDATLLIHEGVKAEEIYEKTGKLPDPASTDNAEFQIVLTIIRDGLKADPKKYHKMKERLVGVSEETTTGVKRFYQMQENGTLLFPAINVNDSVTKSKFDNLYGCR 632
            MPGLMA R EFG SQP KGA+I+GSLHMTIQTAVLIETL  LGAEVRW SCNIFSTQDH               KGETL+EYW  T++   W  G   ++I+DDGGDAT+ I  G +AE        L +P S    E +++   I+  + A P  + K +  + GV+EETTTGV R YQ+Q+ G L FPAINVNDSVTKSKFDN YGC+
Sbjct:   29 MPGLMAAREEFGKSQPLKGARISGSLHMTIQTAVLIETLKVLGAEVRWASCNIFSTQDHAAAAIAATGTPVFAVKGETLEEYWTYTDQIFQWPDGEPSNMILDDGGDATMYILIGARAE---AGEDVLSNPQS---EEEEVLFAQIKKRMAATPGFFTKQRAAIKGVTEETTTGVNRLYQLQKKGLLPFPAINVNDSVTKSKFDNKYGCK 232
[Close]
BLAST of FC931427 vs. ExPASy Swiss-Prot
Match: SAHH_BRUA2 (Adenosylhomocysteinase OS=Brucella abortus (strain 2308) GN=ahcY PE=3 SV=1)

HSP 1 Score: 217.624 bits (553), Expect = 4.229e-56
Identity = 116/210 (55.24%), Postives = 139/210 (66.19%), Query Frame = 3 
Query:    3 MPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHXXXXXXXXXXXXXXWKGETLQEYWWCTEKALDWGPGGGPDLIVDDGGDATLLIHEGVKAEEIYEKTGKLPDPASTDNAEFQIVLTIIRDGLKADPKKYHKMKERLVGVSEETTTGVKRFYQMQENGTLLFPAINVNDSVTKSKFDNLYGCR 632
            MPGLMA R EFG SQP KGA+I+GSLHMTIQTAVLIETL  LGAEVRW SCNIFSTQDH               KGETL+EYW  T++   W  G   ++I+DDGGDAT+ I  G +AE        L +P S    E +++   I+  + A P  + K +  + GV+EETTTGV R YQ+Q+ G L FPAINVNDSVTKSKFDN YGC+
Sbjct:   29 MPGLMAAREEFGKSQPLKGARISGSLHMTIQTAVLIETLKVLGAEVRWASCNIFSTQDHAAAAIAATGTPVFAVKGETLEEYWTYTDQIFQWPDGEPSNMILDDGGDATMYILIGARAE---AGEDVLSNPQS---EEEEVLFAQIKKRMAATPGFFTKQRAAIKGVTEETTTGVNRLYQLQKKGLLPFPAINVNDSVTKSKFDNKYGCK 232
The following BLAST results are available for this feature:
BLAST of FC931427 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 235
Match NameE-valueIdentityDescription
SAHH_AGRT51.453e-5655.71Adenosylhomocysteinase OS=Agrobacterium tumefacien... [more]
SAHH_MESSB2.479e-5653.81Adenosylhomocysteinase OS=Mesorhizobium sp. (strai... [more]
SAHH_BRUSU4.229e-5655.24Adenosylhomocysteinase OS=Brucella suis GN=ahcY PE... [more]
SAHH_BRUSI4.229e-5655.24Adenosylhomocysteinase OS=Brucella suis (strain AT... [more]
SAHH_BRUO24.229e-5655.24Adenosylhomocysteinase OS=Brucella ovis (strain AT... [more]
SAHH_BRUME4.229e-5655.24Adenosylhomocysteinase OS=Brucella melitensis GN=a... [more]
SAHH_BRUMB4.229e-5655.24Adenosylhomocysteinase OS=Brucella melitensis biot... [more]
SAHH_BRUC24.229e-5655.24Adenosylhomocysteinase OS=Brucella canis (strain A... [more]
SAHH_BRUAB4.229e-5655.24Adenosylhomocysteinase OS=Brucella abortus GN=ahcY... [more]
SAHH_BRUA24.229e-5655.24Adenosylhomocysteinase OS=Brucella abortus (strain... [more]

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Properties
Property NameValue
Genbank descriptionC34105A04EF PostHarvP1 Citrus clementina cDNA clone C34105A04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931427 ID=FC931427; Name=FC931427; organism=Citrus clementina; type=EST; length=640bp
AAATGCCGGGGCTCATGGCTTGCCGCGCCGAGTTCGGCCCTTCACAGCCC
TTCAAAGGAGCCAAGATCACCGGTTCACTCCACATGACCATCCAGACCGC
CGTCCTCATCGAGACCCTCACCGCTCTCGGCGCCGAAGTCCGCTGGTGCT
CCTGCAACATCTTCTCAACCCAAGACCACGCGGCCGCCGCCATCGCACGT
GACTCCGCCTCCGTCTTTGCCTGGAAGGGTGAGACCCTCCAGGAGTACTG
GTGGTGCACGGAGAAAGCCCTGGACTGGGGTCCCGGCGGCGGCCCAGATC
TCATCGTCGATGACGGTGGTGACGCCACGTTGTTGATCCACGAGGGAGTC
AAAGCTGAGGAGATCTACGAGAAGACCGGGAAGTTGCCCGACCCGGCCTC
CACCGACAACGCCGAGTTTCAGATTGTTTTGACTATCATTAGAGATGGGT
TGAAGGCCGATCCCAAGAAGTACCACAAAATGAAGGAAAGATTAGTTGGT
GTTTCCGAAGAAACCACGACCGGTGTCAAGAGATTTTATCAGATGCAAGA
AAATGGAACCCTCTTGTTCCCTGCCATCAATGTCAATGACTCTGTCACCA
AGAGCAAGTTTGATAACTTGTATGGATGCCGCACTCGCTC
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