FC931428

Overview
NameFC931428
Unique NameFC931428
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length718
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig10223 contig Ccv1_Contig10223:1..719. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC931428 vs. ExPASy Swiss-Prot
Match: CCPR_YEAST (Cytochrome c peroxidase, mitochondrial OS=Saccharomyces cerevisiae GN=CCP1 PE=1 SV=2)

HSP 1 Score: 117.087 bits (292), Expect = 9.565e-26
Identity = 66/171 (38.60%), Postives = 96/171 (56.14%), Query Frame = 3
Query:  102 EDYKKAVEKCKRKLRGFIAEKNC---APLMLRIAWHSAGTYDVKTKTGGPFG-TMRLAAEQAHSANNGLDIAVRLLEPFKEQFPTISYADLYQLAGLVGVEVTGGPDIPFHPGRDDKAE--PPQEGRLPDAKQGNDHLRQVFGAQMGLSDKDIVALSGGHTLGRCHKERSG 596
            ED++K       KLR      N     P+++R+AWH++GT+D    TGG +G T R   E    +N GL    + LEP  ++FP IS  DL+ L G+  V+   GP IP+  GR D  E   P  GRLPDA +  D++R  F  ++ ++D+++VAL G H LG+ H + SG
Sbjct:   84 EDFQKVYNAIALKLREDDEYDNYIGYGPVLVRLAWHTSGTWDKHDNTGGSYGGTYRFKKEFNDPSNAGLQNGFKFLEPIHKEFPWISSGDLFSLGGVTAVQEMQGPKIPWRCGRVDTPEDTTPDNGRLPDADKDADYVRTFF-QRLNMNDREVVALMGAHALGKTHLKNSG 253          
BLAST of FC931428 vs. ExPASy Swiss-Prot
Match: APX6_ARATH (Putative L-ascorbate peroxidase 6 OS=Arabidopsis thaliana GN=APX6 PE=2 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 1.522e-19
Identity = 55/165 (33.33%), Postives = 87/165 (52.73%), Query Frame = 3
Query:   87 YPTVSEDYKKAVEKCKRKLRGFIAEKNCAPLMLRIAWHSAGTYDVKTKTGGPFGTMRLAAEQAHSANNGLDIAVRLLEPFK---EQFPTISYADLYQLAGLVGVEVTGGPDIPFHPGRDDKAEPPQEGRLPDAKQGNDHLRQVFGAQMGLSDKDIVALSGGHTLG 572
            YP +  + +K V K K            A  +LR+ +H AGT+++   +GG  G+  +A E     N GL  ++++L   K   ++   +S+AD+  +AG   V + GGP IP   GR D A+P  EG+LP        L++ F  + G S +++VALSG HT+G
Sbjct:   98 YPVMQNEIRKVVTKGK------------AAGVLRLVFHDAGTFELDDHSGGINGS--IAYELERPENIGLKKSLKVLAKAKVKVDEIQPVSWADMISVAGSEAVSICGGPTIPVVLGRLDSAQPDPEGKLPPETLSASGLKECF-KRKGFSTQELVALSGAHTIG 247          

HSP 2 Score: 31.187 bits (69), Expect = 1.522e-19
Identity = 18/40 (45.00%), Postives = 23/40 (57.50%), Query Frame = 2
Query:  620 PLIFDNSYFTELLTGEKGWSS--------ALPSDKALLDD 715
            P +FDN+Y+  LL  EK W+S         LPSD AL+ D
Sbjct:  254 PTVFDNAYYKILL--EKPWTSTSKMTSMVGLPSDHALVQD 291          
BLAST of FC931428 vs. ExPASy Swiss-Prot
Match: KATG_ERYLH (Catalase-peroxidase OS=Erythrobacter litoralis (strain HTCC2594) GN=katG PE=3 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 6.269e-17
Identity = 62/184 (33.70%), Postives = 83/184 (45.11%), Query Frame = 3
Query:  174 PLMLRIAWHSAGTYDVKTKTGGPF-GTMRLAAEQAHSANNGLDIAVRLLEPFKEQFPT-ISYADLYQLAGLVGVEVTGGPDIPFHPGRDDKAEP---------------------PQEGRL----------------PDAKQGNDH--------LRQVFGAQMGLSDKDIVAL-SGGHTLGRCH 581
            P  +R+AWH+AGTY      GG   G  R A   +   N  LD A RLL P K+++   IS+ADL+ L G V +E  GGP   F  GR D  EP                     P EGR                 P+   G+ H        +R+ F A+M ++D++ VAL +GGH  G+CH
Sbjct:   95 PFFIRMAWHAAGTYRTGDGRGGSSSGQQRFAPLNSWPDNGNLDKARRLLWPIKQKYGKHISWADLFILTGNVAIESMGGPVFGFGGGRKDVYEPEMVYWGTEEQWVDTGAETRIHPDEGRALENPLAAIQMGLIYVNPEGPGGDPHDPEGMARDMRETF-ARMAMNDEETVALTAGGHAFGKCH 277          

HSP 2 Score: 27.7202 bits (60), Expect = 6.269e-17
Identity = 12/24 (50.00%), Postives = 14/24 (58.33%), Query Frame = 2
Query:  596 IEGPWTRHPLIFDNSYFTELLTGE 667
            IEGPWT +P  + N YF  L   E
Sbjct:  318 IEGPWTPNPTQWGNDYFRLLFKYE 341          
BLAST of FC931428 vs. ExPASy Swiss-Prot
Match: KATG_SACD2 (Catalase-peroxidase OS=Saccharophagus degradans (strain 2-40 / ATCC 43961 / DSM 17024) GN=katG PE=3 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 8.973e-16
Identity = 62/178 (34.83%), Postives = 89/178 (50.00%), Query Frame = 3
Query:  174 PLMLRIAWHSAGTYDVKTKTGGPFGTM-RLAAEQAHSANNGLDIAVRLLEPFKEQFPT-ISYADLYQLAGLVGVEVTGGPDIPFHPGRDDKAEPPQ-----EGRL---------------------------PDAKQGN-------DHLRQVFGAQMGLSDKDIVAL-SGGHTLGRCH 581
            P  +R++WH+AGTY +    GG  G M R A   +   N  LD A RLL+P K+++   +S++DL  LAG +G+E  G P + F  GRDD+ EP +     EG+                            P+   GN         +RQ FG +MG+SD++ VAL +GGHT G+ H
Sbjct:   97 PFFIRLSWHAAGTYRMIDGRGGADGGMQRFAPLNSWPDNASLDKARRLLQPIKQKYGNNLSWSDLLVLAGTIGMEDMGFPIVGFAFGRDDEWEPEEVNWGPEGQWLTDRRHSGDRKLDKPFGATEMGLIYVNPEGPHGNPDPIAAAHDIRQAFG-RMGMSDEETVALIAGGHTFGKAH 273          
BLAST of FC931428 vs. ExPASy Swiss-Prot
Match: KATG_GEOTN (Catalase-peroxidase OS=Geobacillus thermodenitrificans (strain NG80-2) GN=katG PE=3 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 4.453e-15
Identity = 63/179 (35.20%), Postives = 84/179 (46.93%), Query Frame = 3
Query:  174 PLMLRIAWHSAGTYDVKTKTGGPF-GTMRLAAEQAHSANNGLDIAVRLLEPFKEQFPT-ISYADLYQLAGLVGVEVTGGPDIPFHPGRDDKAEPPQ------------------EGRL----------------------PDAKQGNDHLRQVFGAQMGLSDKDIVAL-SGGHTLGRCH 581
            PL +R+AWHSAGTY +    GG   GT R A   +   N  LD A RLL P K+++   IS+ADL+ LAG V +E  GG  I F  GR D   P +                  +G L                      PD K     +R+ F  +MG++D++ VAL +GGHT G+ H
Sbjct:   93 PLFIRMAWHSAGTYRIGDGRGGASTGTQRFAPLNSWPDNANLDKARRLLWPIKKKYGNKISWADLFILAGNVAIESMGGKTIGFGGGRVDVWHPEEDIYWGAEKEWLASERHSDDGELEHPLAASVMGLIYVNPEGPDGKPDPKAAARDIRETF-RRMGMNDEETVALIAGGHTFGKAH 270          
BLAST of FC931428 vs. ExPASy Swiss-Prot
Match: KATG_BACST (Catalase-peroxidase OS=Bacillus stearothermophilus GN=katG PE=1 SV=2)

HSP 1 Score: 80.1073 bits (196), Expect = 1.296e-14
Identity = 61/179 (34.08%), Postives = 82/179 (45.81%), Query Frame = 3
Query:  174 PLMLRIAWHSAGTYDVKTKTGGPF-GTMRLAAEQAHSANNGLDIAVRLLEPFKEQFPT-ISYADLYQLAGLVGVEVTGGPDIPFHPGRDDKAEPPQE----------------------------------------GRLPDAKQGNDHLRQVFGAQMGLSDKDIVAL-SGGHTLGRCH 581
            PL +R+AWHSAGTY +    GG   GT R A   +   N  LD A RLL P K+++   IS+ADL+ LAG V +E  GG  I F  GR D   P ++                                           PD K     +R+ F  +MG++D++ VAL +GGHT G+ H
Sbjct:   93 PLFIRMAWHSAGTYRIGDGRGGASTGTQRFAPLNSWPDNANLDKARRLLWPIKKKYGNKISWADLFILAGNVAIESMGGKTIGFGGGRVDVWHPEEDVYWGSEKEWLASERYSGDRELENPLAAVQMGLIYVNPEGPDGKPDPKAAARDIRETF-RRMGMNDEETVALIAGGHTFGKAH 270          
BLAST of FC931428 vs. ExPASy Swiss-Prot
Match: KATG_BACHD (Catalase-peroxidase OS=Bacillus halodurans GN=katG PE=3 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 1.296e-14
Identity = 63/192 (32.81%), Postives = 89/192 (46.35%), Query Frame = 3
Query:  174 PLMLRIAWHSAGTYDVKT-KTGGPFGTMRLAAEQAHSANNGLDIAVRLLEPFKEQFPT-ISYADLYQLAGLVGVEVTGGPDIPFHPGRDDKAEPPQE-----------------------------------------GRLPDAKQGNDHLRQVFGAQMGLSDKDIVAL-SGGHTLGRCHKERSGLRDH-GP 614
            P  +R++WH+AGTY +   + GG  G  R A   +   N  LD A RLL P K+++   IS+ADL  LAG V +E  GGP I F  GR+D   P ++                                            PD  +    +R+ FG +MG++D++ VAL +GGHT G+ H   +G  DH GP
Sbjct:   91 PFFIRMSWHAAGTYRIGDGRGGGGTGNQRFAPLNSWPDNGNLDKARRLLWPIKQKYGNKISWADLLVLAGNVAIEDMGGPVIGFGAGREDIWHPEEDIYWGSEKEWLTGDKRYSGDRELENPLAAVEMGLIYVNPEGPDGKPDPIKAAHDIRETFG-RMGMNDEETVALIAGGHTFGKAH--GAGNPDHVGP 279          
BLAST of FC931428 vs. ExPASy Swiss-Prot
Match: KATG_SYMTH (Catalase-peroxidase OS=Symbiobacterium thermophilum GN=katG PE=3 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 2.210e-14
Identity = 61/179 (34.08%), Postives = 84/179 (46.93%), Query Frame = 3
Query:  174 PLMLRIAWHSAGTYDVKTKTGG-PFGTMRLAAEQAHSANNGLDIAVRLLEPFKEQF-PTISYADLYQLAGLVGVEVTGGPDIPFHPGRDDKAEPPQE----------------------------------------GRLPDAKQGNDHLRQVFGAQMGLSDKDIVAL-SGGHTLGRCH 581
            PL++R+AWHSAGTY ++   GG   G  R A   +   N  LD A RLL P K+++   IS+ADL  LAG V +E  G   I F  GR D  EP ++                                        GR PD  +    +R+ F  +MG++D++ VAL +GGHT G+ H
Sbjct:   81 PLIIRMAWHSAGTYRIQDGRGGAESGAQRFAPLNSWPDNINLDKARRLLWPIKQKYGRRISWADLMILAGNVALESMGLKTIGFAGGRADVWEPEEDIYWGSEQQWLGRDRFGEEGKLEDPLAASEMGLIYVNPEGPGREPDPLKAAQQIRETF-KRMGMNDEETVALIAGGHTFGKTH 258          
BLAST of FC931428 vs. ExPASy Swiss-Prot
Match: KATG_GEOKA (Catalase-peroxidase OS=Geobacillus kaustophilus GN=katG PE=3 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 2.887e-14
Identity = 60/179 (33.52%), Postives = 82/179 (45.81%), Query Frame = 3
Query:  174 PLMLRIAWHSAGTYDVKT-KTGGPFGTMRLAAEQAHSANNGLDIAVRLLEPFKEQFPT-ISYADLYQLAGLVGVEVTGGPDIPFHPGRDDKAEPPQE----------------------------------------GRLPDAKQGNDHLRQVFGAQMGLSDKDIVAL-SGGHTLGRCH 581
            PL +R+AWHSAGTY +   + GG  GT R A   +   N  LD A RLL P K+++   IS+ADL  LAG V +E  GG  I F  GR+D   P ++                                           PD       +R+ F  +MG++D++ VAL +GGHT G+ H
Sbjct:   93 PLFIRMAWHSAGTYRIGDGRGGGSTGTQRFAPLNSWPDNANLDKARRLLWPIKKKYGNKISWADLMILAGNVAIESMGGKTIGFGGGREDVWHPEEDIYWGAEKEWLASERYSGDRELENPLAAVQMGLIYVNPEGPDGKPDPVAAARDIRETF-RRMGMNDEETVALIAGGHTFGKAH 270          
BLAST of FC931428 vs. ExPASy Swiss-Prot
Match: KATG_DESAA (Catalase-peroxidase OS=Desulfatibacillum alkenivorans (strain AK-01) GN=katG PE=3 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 4.924e-14
Identity = 63/184 (34.24%), Postives = 86/184 (46.74%), Query Frame = 3
Query:  174 PLMLRIAWHSAGTYDVKTKTGGP-FGTMRLAAEQAHSANNGLDIAVRLLEPFKEQF-PTISYADLYQLAGLVGVEVTGGPDIPFHPGRDDKAEPPQE-----------------------------------GRL---PDAKQGN-------DHLRQVFGAQMGLSDKDIVAL-SGGHTLGRCH 581
            PL +R+AWHSAGTY +    GG   G+ RLA   +   N  LD A RLL P K+++   IS+ADL  LAG   +E  G P   F  GR+D  EP Q+                                   G +   P+   GN         +R+ F A+M ++D++ VAL +GGHT G+CH
Sbjct:   89 PLFIRMAWHSAGTYRMGDGRGGAGSGSQRLAPLNSWPDNVNLDKARRLLWPIKQKYGKRISWADLMVLAGNCAIESMGLPTFGFAGGREDVWEPEQDVYWGSEEEWLATSDKPKSRYSGERDLENPLAAVQMGLIYVNPEGPDGNPDPIASGKDVRETF-ARMAMNDEETVALVAGGHTFGKCH 271          
The following BLAST results are available for this feature:
BLAST of FC931428 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 80
Match NameE-valueIdentityDescription
CCPR_YEAST9.565e-2638.60Cytochrome c peroxidase, mitochondrial OS=Saccharo... [more]
APX6_ARATH1.522e-1933.33Putative L-ascorbate peroxidase 6 OS=Arabidopsis t... [more]
KATG_ERYLH6.269e-1733.70Catalase-peroxidase OS=Erythrobacter litoralis (st... [more]
KATG_SACD28.973e-1634.83Catalase-peroxidase OS=Saccharophagus degradans (s... [more]
KATG_GEOTN4.453e-1535.20Catalase-peroxidase OS=Geobacillus thermodenitrifi... [more]
KATG_BACST1.296e-1434.08Catalase-peroxidase OS=Bacillus stearothermophilus... [more]
KATG_BACHD1.296e-1432.81Catalase-peroxidase OS=Bacillus halodurans GN=katG... [more]
KATG_SYMTH2.210e-1434.08Catalase-peroxidase OS=Symbiobacterium thermophilu... [more]
KATG_GEOKA2.887e-1433.52Catalase-peroxidase OS=Geobacillus kaustophilus GN... [more]
KATG_DESAA4.924e-1434.24Catalase-peroxidase OS=Desulfatibacillum alkenivor... [more]

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Properties
Property NameValue
Genbank descriptionC34105A05EF PostHarvP1 Citrus clementina cDNA clone C34105A05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931428 ID=FC931428; Name=FC931428; organism=Citrus clementina; type=EST; length=718bp
GGTGCTCTGCTCGTGCCACTCTCGTTTGTTAAGGATTTGCGTCTCTCTTT
CTCATTTCATTCAGCGTTGAAAAGATGACGAAGAATTACCCCACTGTTAG
CGAGGATTACAAGAAGGCCGTGGAGAAATGCAAGAGGAAGCTCAGAGGCT
TCATCGCTGAGAAGAACTGCGCTCCACTCATGCTCCGTATCGCGTGGCAC
TCAGCTGGTACATATGATGTGAAGACCAAGACCGGAGGTCCATTCGGAAC
CATGAGGCTCGCTGCTGAGCAGGCACACTCAGCCAACAACGGCCTCGATA
TTGCCGTTAGGCTTTTGGAGCCGTTCAAGGAGCAGTTCCCTACCATCTCC
TACGCTGACCTTTATCAGCTTGCTGGTCTTGTTGGCGTTGAGGTTACCGG
TGGGCCCGATATCCCCTTCCACCCTGGAAGAGATGACAAGGCTGAGCCAC
CTCAAGAAGGCCGGCTTCCTGATGCTAAACAGGGTAATGATCACTTGAGG
CAAGTCTTTGGTGCTCAGATGGGCCTCAGCGACAAGGATATTGTTGCTCT
CTCTGGTGGCCACACCCTGGGAAGGTGCCACAAGGAGAGGTCTGGATTGA
GGGACCATGGACCCGNCACCCTCTCATTTTTGACAATTCCTACTTCACGG
AGCTCTTGACTGGTGAGAAAGGATGGTCTTCTGCATTGCCATCCGACAAG
GCCCTTCTGGATGACCCT
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