FC931428

Overview
NameFC931428
Unique NameFC931428
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length718
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig10223 contig Ccv1_Contig10223:1..719. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC931428 vs. ExPASy Swiss-Prot
Match: KATG_SPHAL (Catalase-peroxidase OS=Sphingopyxis alaskensis GN=katG PE=3 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 6.431e-14
Identity = 62/186 (33.33%), Postives = 84/186 (45.16%), Query Frame = 3
Query:  174 PLMLRIAWHSAGTYDVKTKTGGP-FGTMRLAAEQAHSANNGLDIAVRLLEPFKEQFPT-ISYADLYQLAGLVGVEVTGGPDIPFHPGRDDKAEPPQ----------------------------EGRL-----------PDAKQGNDH--------LRQVFGAQMGLSDKDIVAL-SGGHTLGRCH 581
            P  +R+AWH+AGTY      GG   G  R A   +   N  LD A RLL P K+++   IS+ADL+ LAG V +E  GGP   F  GR D  EP +                            EG L           P+  QGN H        +++ F  +M ++D++ VAL +GGHT G+ H
Sbjct:   91 PFFIRMAWHAAGTYRTADGRGGANSGQQRFAPLDSWPDNGNLDKARRLLWPIKQKYGNKISWADLFILAGNVAIESMGGPVFGFGGGRVDVYEPERDIYWGSEDKWVNQGVQTRIDPAKGMETIEGPLAAIQMGLIYVNPEGPQGNPHDDEGMARDMKETF-KRMAMNDEETVALTAGGHTFGKAH 275          
BLAST of FC931428 vs. ExPASy Swiss-Prot
Match: KATG_MARMS (Catalase-peroxidase OS=Marinomonas sp. (strain MWYL1) GN=katG PE=3 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 9.598e-14
Identity = 58/180 (32.22%), Postives = 77/180 (42.78%), Query Frame = 3
Query:  174 PLMLRIAWHSAGTYDVKTKTGG-PFGTMRLAAEQAHSANNGLDIAVRLLEPFKEQF-PTISYADLYQLAGLVGVEVTGGPDIPFHPGRDDKAEPPQ-----------------------------------------EGRLPDAKQGNDHLRQVFGAQMGLSDKDIVAL-SGGHTLGRCH 581
            P  +R+AWHSAGTY      GG   GT R A   +   N  LD A RLL P K+++   IS+ADL  LAG   +E  G     F  GR D  +P +                                         EG+ PD       +R  FG +M ++D++ VAL +GGHT G+ H
Sbjct:   96 PFFIRMAWHSAGTYRTADGRGGATSGTQRFAPLNSWPDNVNLDKARRLLWPIKQKYGRKISWADLMILAGNCALESMGFKTFGFAGGRVDVWQPEEDIYWGTEKTWLDDERYTGDRELENPLAAVQMGLIYVNPEGPEGK-PDTLASARDIRDTFG-RMAMNDEETVALIAGGHTFGKAH 273          

HSP 2 Score: 30.0314 bits (66), Expect = 9.598e-14
Identity = 10/20 (50.00%), Postives = 14/20 (70.00%), Query Frame = 2
Query:  596 IEGPWTRHPLIFDNSYFTEL 655
            +EG WT+ P+ +DN YF  L
Sbjct:  314 LEGAWTKSPIAWDNGYFENL 333          
BLAST of FC931428 vs. ExPASy Swiss-Prot
Match: KATG_ENT38 (Catalase-peroxidase OS=Enterobacter sp. (strain 638) GN=katG PE=3 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 3.192e-13
Identity = 61/176 (34.66%), Postives = 79/176 (44.89%), Query Frame = 3
Query:  177 LMLRIAWHSAGTY-DVKTKTGGPFGTMRLAAEQAHSANNGLDIAVRLLEPFKEQF-PTISYADLYQLAGLVGVEVTGGPDIPFHPGRDDKAEPPQEGRLPDAKQGNDH--------------------------------------LRQVFGAQMGLSDKDIVAL-SGGHTLGRCH 581
            L +R+AWH AGTY  V  + G   G  R A   A   N  LD A RLL P K+++   IS+ADLY LAG V +E +G     F  GR+D  EP  +    D K    H                                      +R  FG  MG++D++ VAL +GGHTLG+ H
Sbjct:   99 LFIRMAWHGAGTYRSVDGRGGAGRGQQRFAPLNAWPDNVSLDKARRLLWPIKQKYGQKISWADLYILAGNVALENSGFRTFGFGAGREDVWEPDMDVNWGDEKAWLTHRDPESLAKRPLAATEMGLIYVNPEGPNASGEPLSAAAAIRATFG-NMGMNDEETVALIAGGHTLGKTH 273          
BLAST of FC931428 vs. ExPASy Swiss-Prot
Match: KATG2_LEGPL (Catalase-peroxidase 2 OS=Legionella pneumophila (strain Lens) GN=katG2 PE=3 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 3.192e-13
Identity = 59/186 (31.72%), Postives = 83/186 (44.62%), Query Frame = 3
Query:  165 NCAPLMLRIAWHSAGTYDVKTKTGGP-FGTMRLAAEQAHSANNGLDIAVRLLEPFKEQF-PTISYADLYQLAGLVGVEVTGGPDIPFHPGRDDKAE---------------------------------------PPQEGRLPDAKQGNDHLRQVFGAQMGLSDKDIVAL-SGGHTLGRCHKERSG 596
            N  PL +R++WH+AGTY +    GG   G  R A + +   N  LD A RLL P K+++   IS+ADL  LAG V +E  G   I F  GR+D  E                                       P     +PD     + +R+ FG +M ++D++ VAL +GGH  G+ H   SG
Sbjct:   97 NYGPLFIRMSWHAAGTYRIYDGRGGANGGFQRFAPQNSWPDNANLDKARRLLWPIKQKYGRKISWADLLVLAGNVAMESMGFKTIGFAGGREDAWEAININWGTEGKWLESKRQDKVGKLEKPLAATVMGLIYVNPEGPNGVPDPLAAAEKIRETFG-RMAMNDEETVALIAGGHAFGKTHGAASG 281          
BLAST of FC931428 vs. ExPASy Swiss-Prot
Match: KATG_SALRD (Catalase-peroxidase OS=Salinibacter ruber (strain DSM 13855) GN=katG PE=3 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 3.548e-13
Identity = 57/179 (31.84%), Postives = 80/179 (44.69%), Query Frame = 3
Query:  174 PLMLRIAWHSAGTYDVKTKTGGPFG-TMRLAAEQAHSANNGLDIAVRLLEPFKEQFPT-ISYADLYQLAGLVGVEVTGGPDIPFHPGRDDKAEPPQE------------GRL----------------------------PDAKQGNDHLRQVFGAQMGLSDKDIVAL-SGGHTLGRCH 581
            PL +R++WH+AGTY      GG  G   RLA   +   N  LD A RLL P K+++   IS+ADL  LAG V +E  G     F  GR+D  +P +             GR                             PD +     +R+ FG +M ++D++  AL +GGHT G+ H
Sbjct:   84 PLFIRMSWHAAGTYRTTDGRGGSSGGRQRLAPLNSWPDNANLDKARRLLWPVKQKYGRKISWADLLVLAGNVAMESMGFETFGFAGGREDDFKPDESIDWGPEDEMETWGRFNEEDELDNPLGATVMGLIYVNPEGPESTPDPEWSAQRIRKSFG-RMAMNDRETAALIAGGHTFGKVH 261          

HSP 2 Score: 25.409 bits (54), Expect = 3.548e-13
Identity = 12/24 (50.00%), Postives = 13/24 (54.17%), Query Frame = 2
Query:  596 IEGPWTRHPLIFDNSYFTELLTGE 667
            IEGPWT  P  +D  Y   LL  E
Sbjct:  302 IEGPWTDAPTEWDMGYLDFLLDYE 325          
BLAST of FC931428 vs. ExPASy Swiss-Prot
Match: KATG_COLP3 (Catalase-peroxidase OS=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) GN=katG PE=3 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 4.168e-13
Identity = 62/178 (34.83%), Postives = 83/178 (46.63%), Query Frame = 3
Query:  174 PLMLRIAWHSAGTYDVKTKTGGPF-GTMRLAAEQAHSANNGLDIAVRLLEPFKEQF-PTISYADLYQLAGLVGVEVTGGPDIPFHPGRDDKAEP-----------------PQEGRL----------------------PDAKQGNDHLRQVFGAQMGLSDKDIVA-LSGGHTLGRCH 581
            PLM+R+AWHSAG Y V    GG   G  R A   +   N  LD A RLL P K+++   IS+ADL  L+G V +E  G     F  GR D  EP                  ++G+L                      PD     + +R  FG +M ++D++IVA L+GGHTLG+ H
Sbjct:   99 PLMIRMAWHSAGVYRVHDGRGGASGGQQRFAPLNSWPDNVNLDKARRLLWPVKQKYGRKISWADLMVLSGNVALESMGFKTFGFAGGRTDDWEPDLVYWGPETAMLSDKRRDKKGKLKGPLAAVEMGLIYVNPEGPHGKPDPLLAANDIRMSFG-RMAMNDEEIVALLAGGHTLGKAH 275          
BLAST of FC931428 vs. ExPASy Swiss-Prot
Match: KATG_SYNPW (Catalase-peroxidase OS=Synechococcus sp. (strain WH7803) GN=katG PE=3 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 5.985e-13
Identity = 58/178 (32.58%), Postives = 79/178 (44.38%), Query Frame = 3
Query:  177 LMLRIAWHSAGTYDVKTKTGGP-FGTMRLAAEQAHSANNGLDIAVRLLEPFKEQF-PTISYADLYQLAGLVGVEVTGGPDIPFHPGRDDKAEPPQE------------------GRL----------------------PDAKQGNDHLRQVFGAQMGLSDKDIVAL-SGGHTLGRCH 581
            L +R+AWHSAGTY      GG   G  R A   +   N  LD A RLL P K ++   IS+ADL  L+G V +E  G     F  GR+D  +P ++                  G L                      PD       +R+ F A+MG++ ++ VAL +GGHT G+CH
Sbjct:   89 LFIRLAWHSAGTYRTGDGRGGAGHGNQRFAPLNSWPDNTNLDKARRLLWPIKRKYGNAISWADLIILSGNVALESMGFRTFGFAGGREDIWQPEEDVFWGKETGWLKDERRNDKGELNQPLAAVEMGLIYVNPEGPHGEPDPVASGRDVRETF-ARMGMTVEETVALVAGGHTFGKCH 265          

HSP 2 Score: 24.6386 bits (52), Expect = 5.985e-13
Identity = 10/24 (41.67%), Postives = 13/24 (54.17%), Query Frame = 2
Query:  596 IEGPWTRHPLIFDNSYFTELLTGE 667
            IEG W  +P  +D  YF  + T E
Sbjct:  306 IEGAWKPNPTRWDQGYFQMMFTYE 329          
BLAST of FC931428 vs. ExPASy Swiss-Prot
Match: KATG_RHOBA (Catalase-peroxidase OS=Rhodopirellula baltica GN=katG PE=3 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 7.110e-13
Identity = 60/179 (33.52%), Postives = 81/179 (45.25%), Query Frame = 3
Query:  174 PLMLRIAWHSAGTYDVKTKTGGPF-GTMRLAAEQAHSANNGLDIAVRLLEPFKEQFPT-ISYADLYQLAGLVGVEVTGGPDIPFHPGRDDKAEP-------PQEGRLPDAKQGNDH---------------------------------LRQVFGAQMGLSDKDIVAL-SGGHTLGRCH 581
            PL +R+AWHSAGTY V    GG   GT R A   +   N  LD A RLL P K+++ + IS+ADL  L G   +E  G     F  GR+D  EP       P+   L D +   D                                  +R+ FG +M ++D++ VAL +GGHT G+ H
Sbjct:  200 PLFIRMAWHSAGTYRVSDGRGGASDGTQRFAPLNSWPDNANLDKARRLLWPIKQKYGSKISWADLMVLTGNCALEDMGFETFGFAGGREDVWEPQKDVYWGPETEWLGDKRYSGDRDLQNPLAAVQMGLIYVNPEGPNGKPDPIAAAKDIRETFG-RMAMNDEETVALIAGGHTFGKAH 377          
BLAST of FC931428 vs. ExPASy Swiss-Prot
Match: KATG_ACIBC (Catalase-peroxidase OS=Acinetobacter baumannii (strain ACICU) GN=katG PE=3 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 7.110e-13
Identity = 62/189 (32.80%), Postives = 84/189 (44.44%), Query Frame = 3
Query:  165 NCAPLMLRIAWHSAGTYDVKTKTGGPF-GTMRLAAEQAHSANNGLDIAVRLLEPFKEQF-PTISYADLYQLAGLVGVEVTGGPDIPFHPGRDDKAEPPQEGRLPDAKQGNDH--------------------------------------LRQVFGAQMGLSDKDIVAL-SGGHTLGRCHKERSGLRDH 608
            N   L +R+AWH+AGTY +    GG   G  R A   +   N  LD A RLL P K+++   IS+ADL+ LAG + +E +G     F  GR+D  EP  +    D K+   H                                      +R  FG  M + D++IVAL +GGHTLG+ H   S   DH
Sbjct:   88 NYTGLFIRLAWHAAGTYRMGDGRGGAGRGQQRFAPLNSWPDNASLDKARRLLWPVKQKYGQKISWADLFILAGNIALESSGFRTFGFGAGREDVWEPDNDVNWGDEKEWLAHRNSEALAGSNLAATEMGLIYVNPEGPQASGDPRSAAPFIRATFG-NMAMDDEEIVALIAGGHTLGKTHGAASA--DH 273          
BLAST of FC931428 vs. ExPASy Swiss-Prot
Match: KATG_ACIBY (Catalase-peroxidase OS=Acinetobacter baumannii (strain AYE) GN=katG PE=3 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 9.286e-13
Identity = 59/180 (32.78%), Postives = 81/180 (45.00%), Query Frame = 3
Query:  165 NCAPLMLRIAWHSAGTYDVKTKTGGPF-GTMRLAAEQAHSANNGLDIAVRLLEPFKEQF-PTISYADLYQLAGLVGVEVTGGPDIPFHPGRDDKAEPPQEGRLPDAKQGNDH--------------------------------------LRQVFGAQMGLSDKDIVAL-SGGHTLGRCH 581
            N   L +R+AWH+AGTY +    GG   G  R A   +   N  LD A RLL P K+++   IS+ADL+ LAG + +E +G     F  GR+D  EP  +    D K+   H                                      +R  FG  M + D++IVAL +GGHTLG+ H
Sbjct:   88 NYTGLFIRLAWHAAGTYRMGDGRGGAGRGQQRFAPLNSWPDNASLDKARRLLWPVKQKYGQKISWADLFILAGNIALESSGFRTFGFGAGREDVWEPDNDVNWGDEKEWLAHRNSEALAGSNLAATEMGLIYVNPEGPQASGDPRSAAPFIRATFG-NMAMDDEEIVALIAGGHTLGKTH 266          
The following BLAST results are available for this feature:
BLAST of FC931428 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 80
Match NameE-valueIdentityDescription
KATG_SPHAL6.431e-1433.33Catalase-peroxidase OS=Sphingopyxis alaskensis GN=... [more]
KATG_MARMS9.598e-1432.22Catalase-peroxidase OS=Marinomonas sp. (strain MWY... [more]
KATG_ENT383.192e-1334.66Catalase-peroxidase OS=Enterobacter sp. (strain 63... [more]
KATG2_LEGPL3.192e-1331.72Catalase-peroxidase 2 OS=Legionella pneumophila (s... [more]
KATG_SALRD3.548e-1331.84Catalase-peroxidase OS=Salinibacter ruber (strain ... [more]
KATG_COLP34.168e-1334.83Catalase-peroxidase OS=Colwellia psychrerythraea (... [more]
KATG_SYNPW5.985e-1332.58Catalase-peroxidase OS=Synechococcus sp. (strain W... [more]
KATG_RHOBA7.110e-1333.52Catalase-peroxidase OS=Rhodopirellula baltica GN=k... [more]
KATG_ACIBC7.110e-1332.80Catalase-peroxidase OS=Acinetobacter baumannii (st... [more]
KATG_ACIBY9.286e-1332.78Catalase-peroxidase OS=Acinetobacter baumannii (st... [more]

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Properties
Property NameValue
Genbank descriptionC34105A05EF PostHarvP1 Citrus clementina cDNA clone C34105A05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931428 ID=FC931428; Name=FC931428; organism=Citrus clementina; type=EST; length=718bp
GGTGCTCTGCTCGTGCCACTCTCGTTTGTTAAGGATTTGCGTCTCTCTTT
CTCATTTCATTCAGCGTTGAAAAGATGACGAAGAATTACCCCACTGTTAG
CGAGGATTACAAGAAGGCCGTGGAGAAATGCAAGAGGAAGCTCAGAGGCT
TCATCGCTGAGAAGAACTGCGCTCCACTCATGCTCCGTATCGCGTGGCAC
TCAGCTGGTACATATGATGTGAAGACCAAGACCGGAGGTCCATTCGGAAC
CATGAGGCTCGCTGCTGAGCAGGCACACTCAGCCAACAACGGCCTCGATA
TTGCCGTTAGGCTTTTGGAGCCGTTCAAGGAGCAGTTCCCTACCATCTCC
TACGCTGACCTTTATCAGCTTGCTGGTCTTGTTGGCGTTGAGGTTACCGG
TGGGCCCGATATCCCCTTCCACCCTGGAAGAGATGACAAGGCTGAGCCAC
CTCAAGAAGGCCGGCTTCCTGATGCTAAACAGGGTAATGATCACTTGAGG
CAAGTCTTTGGTGCTCAGATGGGCCTCAGCGACAAGGATATTGTTGCTCT
CTCTGGTGGCCACACCCTGGGAAGGTGCCACAAGGAGAGGTCTGGATTGA
GGGACCATGGACCCGNCACCCTCTCATTTTTGACAATTCCTACTTCACGG
AGCTCTTGACTGGTGAGAAAGGATGGTCTTCTGCATTGCCATCCGACAAG
GCCCTTCTGGATGACCCT
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