FC931438

Overview
NameFC931438
Unique NameFC931438
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length707
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC931438 vs. ExPASy Swiss-Prot
Match: C71AL_ARATH (Cytochrome P450 71A21 OS=Arabidopsis thaliana GN=CYP71A21 PE=2 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 1.975e-15
Identity = 47/184 (25.54%), Postives = 95/184 (51.63%), Query Frame = 1
Query:   61 MVSCVPWLLFSWILVVALNYFSRGFKSGSRRLPPGPTPYPVIGNLLELGDKPHKSLAKLAKIHGPIMSLKFGQVTTVVFSSAAMAKEILQNQDTSFCNRTIPDAIYAHGHHEFGMPWLPVATLWRNLRKICNSHAFSSRQLDANQHLRRKKIQDLLAYVQENCRAGTAIHIGQAAFDTTLNLIS 612
            M S    +L S I+ + + +F +  +      P  P   P+IGNL +LG  PH+SL  L+  +GP+M L  G+V  +V SSA +A++IL+  D  F +R          +    + + P    WR ++ +C     S++ + + +++R+++I  ++  +Q++  +   +++ +     T ++IS
Sbjct:    1 MESMTMIILQSLIIFITILFFKKQKRGKKSNTPRSPPRLPLIGNLHQLGHHPHRSLCSLSHRYGPLMLLHLGRVPVLVVSSADVARDILKTHDRVFASRPRSKLFEKLFYDGRDVAFAPYGEYWRQIKSVCVLRLLSNKMVTSFRNVRQEEISLMMEKIQKS--SSLQVNVSELLGSLTNDVIS 182          
BLAST of FC931438 vs. ExPASy Swiss-Prot
Match: C99A3_ORYSJ (Cytochrome P450 99A3 OS=Oryza sativa subsp. japonica GN=CYP99A3 PE=2 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 3.369e-15
Identity = 45/118 (38.14%), Postives = 70/118 (59.32%), Query Frame = 1
Query:  139 SGSRRLPPGPTPYPVIGNLLEL-GDKPHKSLAKLAKIHGPIMSLKFGQVTTVVFSSAAMAKEILQNQDTSFCNR--TIPDAIYAHGHHEFGMPWLPVATLWRNLRKICNSHAFSSRQL 483
            S  +R PPGP   P++G LL L   +P  +L  LA  +GP+M L+ GQV TVV SS A A+E+L+++D +F +R   +   I+ +G+ + G  + P    WR LRK+C     S++ +
Sbjct:   30 SSKKRRPPGPWNLPLVGGLLHLLRSQPQVALRDLAGKYGPVMFLRTGQVDTVVISSPAAAQEVLRDKDVTFASRPSLLVSEIFCYGNLDIG--FAPYGAYWRMLRKLCTVELLSTKMV 145          
BLAST of FC931438 vs. ExPASy Swiss-Prot
Match: C98A2_SOYBN (Cytochrome P450 98A2 OS=Glycine max GN=CYP98A2 PE=2 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 7.505e-15
Identity = 45/160 (28.12%), Postives = 81/160 (50.62%), Query Frame = 1
Query:  151 RLPPGPTPYPVIGNLLELGDKPHKSLAKLAKIHGPIMSLKFGQVTTVVFSSAAMAKEILQNQDTSFCNRTIPDAIYAHGHHEFGMPWLPVATLWRNLRKICNSHAFSSRQLDANQHLRRKKIQDLLAYVQENCRA----GTAI----HIGQAAFDTTLNL 606
            +LPPGP P+PV+GNL ++     +  A+ A+ +GPI+S+ FG    V+ S++ +AKE+L+  D    +R    +          + W      +  +RK+C    FS ++L+A + +R  ++  ++  V  +C +    G  I    H+G  AF+    L
Sbjct:   27 KLPPGPRPWPVVGNLYDIKPVRFRCFAEWAQSYGPIISVWFGSTLNVIVSNSELAKEVLKEHDQLLADRHRSRSAAKFSRDGKDLIWADYGPHYVKVRKVCTLELFSPKRLEALRPIREDEVTSMVDSVYNHCTSTENLGKGILLRKHLGVVAFNNITRL 186          
BLAST of FC931438 vs. ExPASy Swiss-Prot
Match: C80A1_BERST (Berbamunine synthase OS=Berberis stolonifera GN=CYP80A1 PE=1 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 7.505e-15
Identity = 51/187 (27.27%), Postives = 91/187 (48.66%), Query Frame = 1
Query:   88 FSWILVVALNYFSRGFKSGSRRLPPGPTPYPVIGNLLELGDKPHKS----LAKLAKIHGPIMSLKFGQVTTVVFSSAAMAKEILQNQDTSFCNRTIPDAIYAHGHHEFGMPWLPVATLWRNLRKICNSHAFSSRQLDANQHLRRKKIQDLLAYVQENCRAGTAIHIGQAAFDTTLNLISNTIFSIDL 636
            F  I +VAL YF   FK     LPP P  +P++G+L +L  K        ++ +A+ +GP++ LKFG  +++  S+   A E+LQ  D     R          H ++ + W    + W+  RKI ++  FS + L A +  R +   +L+ ++    + G  + +    F   LN++ + +FS D+
Sbjct:    7 FVSISLVALLYFLL-FKPKHTNLPPSPPAWPIVGHLPDLISKNSPPFLDYMSNIAQKYGPLIHLKFGLHSSIFASTKEAAMEVLQTNDKVLSGRQPLPCFRIKPHIDYSILWSDSNSYWKKGRKILHTEIFSQKMLQAQEKNRERVAGNLVNFIM--TKVGDVVELRSWLFGCALNVLGHVVFSKDV 190          
BLAST of FC931438 vs. ExPASy Swiss-Prot
Match: C71DC_CATRO (Tabersonine 16-hydroxylase (Fragment) OS=Catharanthus roseus GN=CYP71D12 PE=1 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 7.505e-15
Identity = 53/169 (31.36%), Postives = 86/169 (50.89%), Query Frame = 1
Query:   82 LLFSWILVVALNYFSRGFK-SGSRRLPPGPTPYPVIGNLLEL-GDKPHKSLAKLAKIHGPIMSLKFGQVTTVVFSSAAMAKEILQNQDTSFCNRTIPDAIYAHGHHEFG-MPWLPVATLWRNLRKICNSHAFSSRQLDANQHLRRKKIQDLLAYVQENCRAGTAIHIGQ 579
            LLF +IL      F +  + S    LPPGP   P++GN  +L G   H  L  LAK +GP+M LK G+V+T+V SS  +A+EI +  D  F +R      +    ++F  M   P    WR LRKI      S + + + + +R +++ + +  +    + GT I++ +
Sbjct:    1 LLFCFILSKTTKKFGQNSQYSNHDELPPGPPQIPILGNAHQLSGGHTHHILRDLAKKYGPLMHLKIGEVSTIVASSPQIAEEIFRTHDILFADRPSNLESFKIVSYDFSDMVVSPYGNYWRQLRKISMMELLSQKSVQSFRSIREEEVLNFIKSI--GSKEGTRINLSK 167          
BLAST of FC931438 vs. ExPASy Swiss-Prot
Match: C71AI_ARATH (Cytochrome P450 71A18 OS=Arabidopsis thaliana GN=CYP71A18 PE=2 SV=2)

HSP 1 Score: 80.8777 bits (198), Expect = 7.505e-15
Identity = 49/186 (26.34%), Postives = 96/186 (51.61%), Query Frame = 1
Query:   55 MDMVSCVPWLLFSWILVVALNYFSRGFKSGSRRLPPGPTPYPVIGNLLELGDKPHKSLAKLAKIHGPIMSLKFGQVTTVVFSSAAMAKEILQNQDTSFCNRTIPDAIYAHGHHEFGMPWLPVATLWRNLRKICNSHAFSSRQLDANQHLRRKKIQDLLAYVQENCRAGTAIHIGQAAFDTTLNLIS 612
            M+M   V   L + + ++ L  F +   +    LPP P   PVIGNL +L   PH+SL  L+  +GP+M L FG+V  +V SS+  A EIL+  D  F NR    A++   +    + + P    WR ++ +C  +  +++ + + + +R +++  ++  +++   + +A ++ +     T ++ S
Sbjct:    1 MEMTLMVSLCLTTLLTLLLLKKFLKR-TAKKVNLPPSPWRIPVIGNLHQLSLHPHRSLHSLSLRYGPLMLLHFGRVPILVVSSSEAAHEILKTHDLKFANRPKSKAVHGLMNGGRDVVFGPYGEYWRQMKSVCILNLLTNKMVASFEKVREEEVNAMMEKLEKASCSSSAENLSELFVTLTSDVTS 185          
BLAST of FC931438 vs. ExPASy Swiss-Prot
Match: C71AE_ARATH (Cytochrome P450 71A14 OS=Arabidopsis thaliana GN=CYP71A14 PE=2 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 7.505e-15
Identity = 47/189 (24.87%), Postives = 97/189 (51.32%), Query Frame = 1
Query:   55 MDMVSCVPWLLFSWILVVALNYFSRGFKSGSRRLPPGPTPYPVIGNLLELGDKPHKSLAKLAKIHGPIMSLKFGQVTTVVFSSAAMAKEILQNQDTSFCNR---TIPDAIYAHGHHEFGMPWLPVATLWRNLRKICNSHAFSSRQLDANQHLRRKKIQDLLAYVQENCRAGTAIHIGQAAFDTTLNLIS 612
            M+M+  +   L + + ++ L  F     +    LPP P   PVIGNL +L   PH+SL  L+  +GP+M L FG+V  +V SS+ +A ++++  D    NR    + + I+  G     M + P    WR ++ +C  +  + +++ + + +R ++I +++  V++     + +++ +     T ++ S
Sbjct:    1 MEMI-IISLCLATILALLLLKQFLNRTYTAKVNLPPSPWRVPVIGNLHQLSLHPHRSLRSLSHRYGPLMLLHFGRVPVLVVSSSDVAHDLMKTHDLKVANRPQLKVVEKIFNGGRE---MVFSPYGEYWRQIKSVCIVNLLNKKKVQSFEKVREEEISEMMERVEKASSDSSPLNLSELLLTLTSDVTS 185          
BLAST of FC931438 vs. ExPASy Swiss-Prot
Match: C71DD_MENPI (Cytochrome P450 71D13 OS=Mentha piperita GN=CYP71D13 PE=1 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 9.802e-15
Identity = 48/164 (29.27%), Postives = 84/164 (51.22%), Query Frame = 1
Query:  154 LPPGPTPYPVIGNL-LELGDKPHKSLAKLAKIHGPIMSLKFGQVTTVVFSSAAMAKEILQNQDTSFCNRTIPDAIYAHGHHEFGMPWLPVATLWRNLRKICNSHAFSSRQLDANQHLRRKKIQDLLAYVQENCRAGTAIHIGQAAFDTTLNLISNTIFSIDLAD 642
            LPPGP   P+IG+L L  G  P  +LA +AK +GP+  ++ G+V +VV SS    KE ++  D +  +R          +    + + P +  WR +RKIC S   S+R + +   +R+ ++  LL +++ +  AG A+ + +     T ++I    F   + D
Sbjct:   35 LPPGPPKLPLIGHLHLLWGKLPQHALASVAKQYGPVAHVQLGEVFSVVLSSREATKEAMKLVDPACADRFESIGTKIMWYDNDDIIFSPYSVHWRQMRKICVSELLSARNVRSFGFIRQDEVSRLLGHLRSSAAAGEAVDLTERIATLTCSIICRAAFGSVIRD 198          
BLAST of FC931438 vs. ExPASy Swiss-Prot
Match: C99A2_ORYSJ (Cytochrome P450 99A2 OS=Oryza sativa subsp. japonica GN=CYP99A2 PE=2 SV=2)

HSP 1 Score: 79.7221 bits (195), Expect = 1.672e-14
Identity = 55/180 (30.56%), Postives = 90/180 (50.00%), Query Frame = 1
Query:   46 RLKMDMVSCVPWLLFSWILVVALNYFSRGFKSGSRRLPPGPTPYPVIGNLLEL-GDKPHKSLAKLAKIHGPIMSLKFGQVTTVVFSSAAMAKEILQNQDTSFCNR--TIPDAIYAHGHHEFGMPWLPVATLWRNLRKICNSHAFSSRQLDANQHLRRKKIQDLLAYVQENCRAGTAIHIG 576
            R  M++ S     L S + +  L        S  +R PPGP   P++G LL L    P  +L +LA  +GP+M L+ GQ+ TVV SS A A+E+L+++D  F +R   +   I+ + + + G  + P    WR LRK+C     S++ +     +R  +   L+     N +A ++ H G
Sbjct:   23 RFIMEINSAATLTLVSLLTLPILLALLTRKSSSKKRRPPGPWNLPLVGGLLHLLRSHPQVALRELASKYGPVMFLRMGQIDTVVVSSPAAAQEVLRDKDVMFASRPSLLVSEIFCYDNLDVG--FAPYGAYWRMLRKLCTVELLSTKVVRQLAPVRNDETLTLV----RNIKAASSGHGG 196          
BLAST of FC931438 vs. ExPASy Swiss-Prot
Match: C98A1_SORBI (Cytochrome P450 98A1 OS=Sorghum bicolor GN=CYP98A1 PE=2 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 2.184e-14
Identity = 61/210 (29.05%), Postives = 98/210 (46.67%), Query Frame = 1
Query:   82 LLFSWILVVALNYFSRGFKSGSR--RLPPGPTPYPVIGNLLELGDKPHKSLAKLAKIHGPIMSLKFGQVTTVVFSSAAMAKEILQNQDTSFCNRTIPDAIYAHGHHEFGMPWLPVATLWRNLRKICNSHAFSSRQLDANQHLRRKKIQDLLAYVQENCRAGTA-----------IHIGQAAFDTTLNLISNTIFSIDLADPTSKTAREFK 672
            LL S  L V L   S    +  R  RLPPGP P+PV+GNL ++     +   + A+ +GP++S+ FG   TVV S++ +AKE+L+  D    +R    +      +   + W      +  +RK+CN   F+ ++L+A   LR  +  ++ A V+   RA TA            H+   AF+    L     F ++      +  REFK
Sbjct:    5 LLLSVALAVVLIPLSLALLNRLRLGRLPPGPRPWPVLGNLRQIKPIRCRCFQEWAERYGPVISVWFGSGLTVVVSTSELAKEVLKENDQQLADRPRNRSTQRFSRNGQDLIWADYGPHYIKVRKLCNLELFTPKRLEA---LRPIREDEVTAMVESVYRAATAPGNEGKPMVVRNHLSMVAFNNITRLAFGKRF-MNANGDIDEQGREFK 210          
The following BLAST results are available for this feature:
BLAST of FC931438 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 112
Match NameE-valueIdentityDescription
C71AL_ARATH1.975e-1525.54Cytochrome P450 71A21 OS=Arabidopsis thaliana GN=C... [more]
C99A3_ORYSJ3.369e-1538.14Cytochrome P450 99A3 OS=Oryza sativa subsp. japoni... [more]
C98A2_SOYBN7.505e-1528.13Cytochrome P450 98A2 OS=Glycine max GN=CYP98A2 PE=... [more]
C80A1_BERST7.505e-1527.27Berbamunine synthase OS=Berberis stolonifera GN=CY... [more]
C71DC_CATRO7.505e-1531.36Tabersonine 16-hydroxylase (Fragment) OS=Catharant... [more]
C71AI_ARATH7.505e-1526.34Cytochrome P450 71A18 OS=Arabidopsis thaliana GN=C... [more]
C71AE_ARATH7.505e-1524.87Cytochrome P450 71A14 OS=Arabidopsis thaliana GN=C... [more]
C71DD_MENPI9.802e-1529.27Cytochrome P450 71D13 OS=Mentha piperita GN=CYP71D... [more]
C99A2_ORYSJ1.672e-1430.56Cytochrome P450 99A2 OS=Oryza sativa subsp. japoni... [more]
C98A1_SORBI2.184e-1429.05Cytochrome P450 98A1 OS=Sorghum bicolor GN=CYP98A1... [more]

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Properties
Property NameValue
Genbank descriptionC34105B03EF PostHarvP1 Citrus clementina cDNA clone C34105B03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931438 ID=FC931438; Name=FC931438; organism=Citrus clementina; type=EST; length=707bp
GACACCTGAATTTGGTGTTTACAGAGCTTCAAACAAAAGAGAGCGAGATT
AAAGATGGATATGGTAAGCTGCGTACCATGGCTTCTATTCTCGTGGATTT
TGGTCGTCGCTTTAAATTACTTTTCAAGAGGATTCAAATCTGGATCCAGA
AGGCTTCCACCGGGACCGACGCCTTATCCGGTGATCGGAAACCTCCTGGA
ACTCGGCGACAAACCTCACAAGTCACTTGCTAAACTTGCCAAGATTCATG
GCCCCATAATGAGTCTAAAATTTGGCCAGGTGACCACAGTTGTCTTTTCT
TCTGCAGCCATGGCCAAAGAAATCCTTCAAAATCAAGACACATCTTTCTG
TAATCGAACAATCCCAGACGCAATCTACGCCCACGGCCATCATGAATTCG
GGATGCCCTGGCTGCCTGTGGCGACACTGTGGAGAAATCTTCGAAAAATA
TGCAACTCACATGCTTTCTCTAGTCGCCAACTCGATGCCAATCAGCACCT
TCGGCGTAAGAAAATCCAAGATCTTCTAGCTTATGTCCAAGAAAATTGCC
GTGCAGGTACAGCAATACATATTGGCCAAGCTGCTTTCGACACTACGCTT
AATTTGATATCCAACACAATTTTTTCTATTGACTTGGCTGATCCCACATC
AAAAACTGCGCGAGAGTTTAAGCAACAAATTGGGGTATGATGGAAGAGCT
GGNAAGC
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