FC931441

Overview
NameFC931441
Unique NameFC931441
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length741
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC931441 vs. ExPASy Swiss-Prot
Match: GSHR_KLULA (Glutathione reductase OS=Kluyveromyces lactis GN=GLR1 PE=1 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 1.064e-14
Identity = 55/181 (30.39%), Postives = 85/181 (46.96%), Query Frame = 1
Query:  220 KAAQLGLKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAMHS-----FASHGVKFSSVEVDLPAMMAQKDKAVSNLTRGIEGLFKKNKVTYVKGYGEFISPSEVSVDTIEGGNTVVKGKNIIIATGSDV---KSLPGITIDEKRIVSSTGALALNEVPKKLVVIGAGYIGLEMGSVW 738
            +AA  G KT  IE + A+GGTC+N GC+P K + ++S +     H+     F    +   ++  + P    ++D  +  L    E    K  V YV G+  F    +V V   +         +I++ATG        +PG        VSS     L + PKK+VV+GAGYIG+E+  V+
Sbjct:   40 RAASYGAKTLLIEAK-AMGGTCVNKGCVPKKVMWYASDLATRIGHAHSYNLFEDLPLTKENLTFNWPEFKKKRDAYIHRLNGIYERNLTKEGVDYVYGWASFTVDGKVQVKKADNCTETYTADHILVATGGKPIYPAKIPGYDYG----VSSDEFFELEDQPKKVVVVGAGYIGVEIAGVF 215          
BLAST of FC931441 vs. ExPASy Swiss-Prot
Match: GSHR_CALJA (Glutathione reductase, mitochondrial OS=Callithrix jacchus GN=GSR PE=2 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 1.064e-14
Identity = 51/180 (28.33%), Postives = 91/180 (50.56%), Query Frame = 1
Query:  211 AAIKAAQLGLKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHGVKFSSVEVDLPAMMAQKDKAVSNLTRGIEGLFKKNKVTYVKGYGEFISPSEVSVDTIEGGNTVVKGKNIIIATGSDVKS-----LPGITIDEKRIVSSTGALALNEVPKKLVVIGAGYIGLEMGSV 735
            +A +AA+LG +   +E    LGGTC+NVGC+P K + +++ ++ E +H    +G      + +   +  ++D  VS L    +    K  +  + G+  F S ++    TIE         +I+IATG    S     +PG ++     ++S G   L E+P + V++GAGYI +E+  +
Sbjct:   79 SARRAAELGARAAVVESH-KLGGTCVNVGCVPKKVMWNTA-VHSEFLHDHGDYGFSSCEGKFNWRVIKEKRDTYVSRLNTIYQNNLTKAHIEIIHGHAVFTSDTK---PTIEVSGRKYTAPHILIATGGMPSSPHESQIPGASLG----ITSDGFFELEELPSRSVIVGAGYIAVEIAGI 249          
BLAST of FC931441 vs. ExPASy Swiss-Prot
Match: GSHRP_ARATH (Glutathione reductase, chloroplastic OS=Arabidopsis thaliana GN=EMB2360 PE=2 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 1.064e-14
Identity = 51/178 (28.65%), Postives = 83/178 (46.63%), Query Frame = 1
Query:  211 AAIKAAQLGLKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHGVKFSSVEVDLPAMMAQKDKAVSNLTRGIEGLFKKNKVTYVKGYGEFISPSEVSVDTIEGGNTVVKGKNIIIATGSD--VKSLPGITIDEKRIVSSTGALALNEVPKKLVVIGAGYIGLEMGSVW 738
            A+    +L   T   +  G +GGTC+  GC+P K L+++S   HE   S        +    D   ++A K+  +  LT   + +  K  V  ++G G+ I P  V VD       +   +NI+IA G    +  +PG    ++  + S  AL L   PKK+ ++G GYI LE   ++
Sbjct:  111 ASAAVCELPFSTISSDTAGGVGGTCVLRGCVPKKLLVYASKYSHEFEDSHGFGWKYETEPSHDWTTLIANKNAELQRLTGIYKNILSKANVKLIEGRGKVIDPHTVDVD-----GKIYTTRNILIAVGGRPFIPDIPG----KEFAIDSDAALDLPSKPKKIAIVGGGYIALEFAGIF 279          
BLAST of FC931441 vs. ExPASy Swiss-Prot
Match: TYTR_TRYBB (Trypanothione reductase OS=Trypanosoma brucei brucei GN=TPR PE=1 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 1.390e-14
Identity = 51/166 (30.72%), Postives = 93/166 (56.02%), Query Frame = 1
Query:  268 ALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHGVKF--SSVEVDLPAMMAQKDKAVSNLTRGIEGLFKKNK-VTYVKGYGEFISPSEVSVDTIEGGNTVVKGK----NIIIATGS--DVKSLPGITIDEKRIVSSTGALALNEVPKKLVVIGAGYIGLEMGSVW 738
            ALGGTC+NVGC+P K L+ +   Y + +   A  G +F  SSV+ +   ++A K++AV ++ +  EG+F   + + +  G+G   S + V V       + VK +    +I++ATGS   + ++PG+    +  +SS  A  L E P++++ +G G+I +E   ++
Sbjct:   47 ALGGTCVNVGCVPKK-LMVTGAQYMDHLRESAGFGWEFDGSSVKANWKKLIAAKNEAVLDINKSYEGMFNDTEGLDFFLGWGSLESKNVVVVRETADPKSAVKERLQADHILLATGSWPQMPAIPGV----EHCISSNEAFYLPEPPRRVLTVGGGFISVEFAGIF 207          
BLAST of FC931441 vs. ExPASy Swiss-Prot
Match: STHA_YERE8 (Soluble pyridine nucleotide transhydrogenase OS=Yersinia enterocolitica serotype O:8 / biotype 1B (strain 8081) GN=sthA PE=3 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 1.390e-14
Identity = 51/178 (28.65%), Postives = 86/178 (48.31%), Query Frame = 1
Query:  211 AAIKAAQLGLKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAMHS--FASHGVKFSSVEVDLPAMMAQKDKAVSNLTRGIEGLFKKNKVTYVKGYGEFISPSEVSVDTIEGGNTVVKGKNIIIATGSDVKSLPGITIDEKRIVSSTGALALNEVPKKLVVIGAGYIGLEMGSVW 738
            AA+   + G +   IE+   +GG C + G IPSKAL H+     E   +  ++ +    SS   D+   +   D+ ++  TR  +G + +N      G   FI  + ++V   +G N  ++  NI+IATGS       +    +RI  S   L L+  P+ +++ GAG IG E  S++
Sbjct:   21 AAMGLVKQGARVAVIERYNNVGGGCTHWGTIPSKALRHAVSRIIEFNQNPLYSDNARTISSSFSDI---LNHADRVINQQTRMRQGFYDRNHCQMFSGDASFIDANTINVRYADGTNDTLRADNIVIATGSRPYRPANVDFTHERIYDSDTILQLSHEPQHVIIYGAGVIGCEYASIF 195          
BLAST of FC931441 vs. ExPASy Swiss-Prot
Match: MERA_SHEPU (Mercuric reductase OS=Shewanella putrefaciens GN=merA PE=3 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 1.390e-14
Identity = 56/182 (30.77%), Postives = 93/182 (51.10%), Query Frame = 1
Query:  214 AIKAAQLGLKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHGVKFSSVEVDLP----AMMAQKDKAVSNLTRG--IEGLFKKN-KVTYVKGYGEFISPSEVSVDTIEGGNTVVKGKNIIIATGSDVKSLPGITIDEKRIVSSTGALALNEVPKKLVVIGAGYIGLEMGSVW 738
            AIKAA+ G K T IE    +GG C+NVGC+PSK L+ ++ +  +  ++       F+ +E   P    A++ Q+  A     R    + + + N  ++ +KG+ +F + + + V   +G    V    I+IATGS     P   + E    +ST AL   E+P+ LVVIG+  + LE+   +
Sbjct:  110 AIKAAEGGAKVTLIEGADVIGGCCVNVGCVPSKILIRAAQLAQQQRNN------PFTGLENHAPQLSRALLTQQQTARVEELRAAKYQNILETNPALSLLKGWAQFKNANTLIVRKNDGTEQAVHADKILIATGSTPTIPPIDGLTETPYWTSTEALFAQELPQHLVVIGSSVVALEIAQAY 285          
BLAST of FC931441 vs. ExPASy Swiss-Prot
Match: GSHR_YARLI (Glutathione reductase OS=Yarrowia lipolytica GN=GLR1 PE=3 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 1.390e-14
Identity = 61/185 (32.97%), Postives = 89/185 (48.11%), Query Frame = 1
Query:  211 AAIKAAQLGLKTTCIEKRGALGGTCLNVGCIPSKALLHSS----HMYHEAMHSFASHGVKFSSVEVDLPAMMAQKDKAVSNLTRGIEGLFKKNKVTYVKGYGEFISPSE-----VSVDTIEGGNTVVKGKNIIIATGSDVKSLPGITIDEKRIVSSTGALALNEVPKKLVVIGAGYIGLEMGSVW 738
            +A +AA  G KT  IE + ALGGTC+NVGC+P K + ++S     +     + F     K++    D     A++D  V  L    E   +K  V YV G+             V V + +G   +   K I+IATG   + LP +   E  I  S G  AL   PK++ V+G GYIG+E+  V+
Sbjct:   21 SARRAASYGAKTLLIEGK-ALGGTCVNVGCVPKKVMWNASDLAGRIRQAKEYGFPDVDPKYAD-NFDWSGFKAKRDAYVKRLNGIYERNLQKEGVEYVFGWATLYKQEGQEFPLVHVKSDDGNTKLYSAKKIMIATGGKPR-LPDVPGAEYGI-DSDGFFALETQPKRVAVVGGGYIGVELAGVF 201          
BLAST of FC931441 vs. ExPASy Swiss-Prot
Match: STHA_PSEMY (Soluble pyridine nucleotide transhydrogenase OS=Pseudomonas mendocina (strain ymp) GN=sthA PE=3 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 1.815e-14
Identity = 54/181 (29.83%), Postives = 82/181 (45.30%), Query Frame = 1
Query:  211 AAIKAAQLGLKTTCIEKRGALGGTCLNVGCIPSKALLHSSH--MYHEAMHSFASHGVK--FSSVEVDLPAMMAQKDKAVSNLTRGIEGLFKKNKVTYVKGYGEFISPSEVSVDTIEGGNTVVKGKNIIIATGSDVKSLPGITIDEKRIVSSTGALALNEVPKKLVVIGAGYIGLEMGSVWA 741
            AA+ AA+ G K   ++ R  +GG C ++G IPSKAL HS    M       F   G    FS      P ++   +K ++       G + +N++    G   F     V V  + G    +  K I+IATGS       +     RI  S   L+L   P++L++ GAG IG E  S+++
Sbjct:   20 AAMNAAKAGRKVAVVDNRPLVGGNCTHLGTIPSKALRHSVRQIMQFNTNPMFRQIGEPRWFS-----FPDVLKSAEKVIAKQVTSRTGYYARNRIDTYFGTASFADEQTVEVVCLNGVVEKLVAKQIVIATGSRPYRPADVDFRHPRIYDSDTILSLGHTPRRLIIYGAGVIGCEYASIFS 195          
BLAST of FC931441 vs. ExPASy Swiss-Prot
Match: GSHR_MOUSE (Glutathione reductase, mitochondrial OS=Mus musculus GN=Gsr PE=2 SV=3)

HSP 1 Score: 79.7221 bits (195), Expect = 1.815e-14
Identity = 49/180 (27.22%), Postives = 90/180 (50.00%), Query Frame = 1
Query:  211 AAIKAAQLGLKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHGVKFSSVEVDLPAMMAQKDKAVSNLTRGIEGLFKKNKVTYVKGYGEFISPSEVSVDTIEGGNTVVKGKNIIIATGS-----DVKSLPGITIDEKRIVSSTGALALNEVPKKLVVIGAGYIGLEMGSV 735
            +A +AA+LG +   +E    LGGTC+NVGC+P K + +++ ++ E MH    +G +    +     +  ++D  VS L    +    K+ +  + GY  F   ++    T+E         +I+IATG          +PG ++     ++S G   L ++P + V++GAGYI +E+  +
Sbjct:   57 SARRAAELGARAAVVESH-KLGGTCVNVGCVPKKVMWNTA-VHSEFMHDHVDYGFQSCEGKFSWHVIKQKRDAYVSRLNTIYQNNLTKSHIEIIHGYATF---ADGPRPTVEVNGKKFTAPHILIATGGVPTVPHESQIPGASLG----ITSDGFFQLEDLPSRSVIVGAGYIAVEIAGI 227          
BLAST of FC931441 vs. ExPASy Swiss-Prot
Match: TYTR_TRYCR (Trypanothione reductase OS=Trypanosoma cruzi GN=TPR PE=1 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 2.371e-14
Identity = 51/166 (30.72%), Postives = 93/166 (56.02%), Query Frame = 1
Query:  268 ALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHGVKF--SSVEVDLPAMMAQKDKAVSNLTRGIEGLFKKNK-VTYVKGYGEFISPSEVSVDTIEGGNTVVKGK----NIIIATGS--DVKSLPGITIDEKRIVSSTGALALNEVPKKLVVIGAGYIGLEMGSVW 738
            ALGGTC+NVGC+P K L+ +   Y E +   A  G +F  +++  +   ++A KD+AV N+ +  E +F+  + + +  G+G   S + V+V       + VK +    NI++A+GS   + ++PGI    +  +SS  A  L E P++++ +G G+I +E   ++
Sbjct:   48 ALGGTCVNVGCVPKK-LMVTGAQYMEHLRESAGFGWEFDRTTLRAEWKKLIAVKDEAVLNINKSYEEMFRDTEGLEFFLGWGSLESKNVVNVRESADPASAVKERLETENILLASGSWPHMPNIPGI----EHCISSNEAFYLPEPPRRVLTVGGGFISVEFAGIF 208          
The following BLAST results are available for this feature:
BLAST of FC931441 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 214
Match NameE-valueIdentityDescription
GSHR_KLULA1.064e-1430.39Glutathione reductase OS=Kluyveromyces lactis GN=G... [more]
GSHR_CALJA1.064e-1428.33Glutathione reductase, mitochondrial OS=Callithrix... [more]
GSHRP_ARATH1.064e-1428.65Glutathione reductase, chloroplastic OS=Arabidopsi... [more]
TYTR_TRYBB1.390e-1430.72Trypanothione reductase OS=Trypanosoma brucei bruc... [more]
STHA_YERE81.390e-1428.65Soluble pyridine nucleotide transhydrogenase OS=Ye... [more]
MERA_SHEPU1.390e-1430.77Mercuric reductase OS=Shewanella putrefaciens GN=m... [more]
GSHR_YARLI1.390e-1432.97Glutathione reductase OS=Yarrowia lipolytica GN=GL... [more]
STHA_PSEMY1.815e-1429.83Soluble pyridine nucleotide transhydrogenase OS=Ps... [more]
GSHR_MOUSE1.815e-1427.22Glutathione reductase, mitochondrial OS=Mus muscul... [more]
TYTR_TRYCR2.371e-1430.72Trypanothione reductase OS=Trypanosoma cruzi GN=TP... [more]

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Properties
Property NameValue
Genbank descriptionC34105B06EF PostHarvP1 Citrus clementina cDNA clone C34105B06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931441 ID=FC931441; Name=FC931441; organism=Citrus clementina; type=EST; length=741bp
GAATTCAATCGATTGATTGGAGAAAAAGTTGATTGAAAAATGGTGATGGC
AAGTCTTGCAAGAAGAAAGGCGTACGTGCTGTCAAGGAATCTCTCGAACT
CGTCGAATGGTAATGTTTTCAAGTACAGTTTCTCGCTTACAAGGGGCTTC
GCTTCGGCATCTGATGAGAACGACGTCGTCGTCATCGGAGGTGGACCTGG
TGGTTACGTGGCCGCCATCAAGGCCGCCCAGCTTGGTCTCAAGACCACGT
GCATCGAGAAGCGTGGGGCCCTCGGCGGCACGTGCCTTAACGTCGGATGC
ATCCCCTCTAAGGCACTTCTTCATTCTTCCCACATGTACCATGAAGCCAT
GCATTCTTTTGCCAGCCATGGTGTAAAGTTTTCTTCTGTTGAAGTTGATT
TGCCTGCTATGATGGCCCAAAAAGATAAAGCTGTGTCTAATCTTACAAGA
GGTATTGAAGGTCTATTCAAGAAGAACAAGGTAACCTATGTGAAAGGATA
TGGCGAGTTTATCTCCCCATCTGAGGTCTCTGTGGACACCATTGAAGGTG
GAAACACTGTCGTGAAAGGCAAGAATATCATAATTGCTACTGGTTCTGAC
GTTAAGTCTCTACCTGGGATCACCATTGATGAAAAGAGAATTGTGTCATC
CACTGGAGCTTTAGCATTGAATGAAGTTCCTAAGAAACTCGTGGTCATTG
GGGCAGGCTACATTGGGCTGGAGATGGGCTCAGTTTGGGCC
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