FC931441

Overview
NameFC931441
Unique NameFC931441
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length741
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC931441 vs. ExPASy Swiss-Prot
Match: STHA_VIBC3 (Soluble pyridine nucleotide transhydrogenase OS=Vibrio cholerae serotype O1 (strain ATCC 39541 / Ogawa 395 / O395) GN=sthA PE=3 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 1.537e-13
Identity = 50/176 (28.41%), Postives = 77/176 (43.75%), Query Frame = 1
Query:  211 AAIKAAQLGLKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHGVKFSSVEVDLPAMMAQKDKAVSNLTRGIEGLFKKNKVTYVKGYGEFISPSEVSVDTIEGGNTVVKGKNIIIATGSDVKSLPGITIDEKRIVSSTGALALNEVPKKLVVIGAGYIGLEMGSVW 738
            AA+   + G     IEK  ++GG C + G IPSKAL H+     E  +S        SS+      +++     +   TR  +G + +N+ T + G   FI    V+V   +G          +IATGS       +     RI  S   L L   P+ +++ GAG IG E  S++
Sbjct:   21 AAMGLTKGGKNVAIIEKESSVGGGCTHWGTIPSKALRHAVSRIIE-FNSNPLFCKNNSSIHATFSTILSHAKSVIDKQTRLRQGFYDRNQCTLIFGAAHFIDAHTVAVKKADGSIDTYSADKFVIATGSRPYHPKDVDFGHPRIYDSDSILNLEHDPRHIIIYGAGVIGCEYASIF 195          
BLAST of FC931441 vs. ExPASy Swiss-Prot
Match: STHA_ERWCT (Soluble pyridine nucleotide transhydrogenase OS=Erwinia carotovora subsp. atroseptica GN=sthA PE=3 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 2.007e-13
Identity = 52/180 (28.89%), Postives = 85/180 (47.22%), Query Frame = 1
Query:  211 AAIKAAQLGLKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHE----AMHSFASHGVKFSSVEVDLPAMMAQKDKAVSNLTRGIEGLFKKNKVTYVKGYGEFISPSEVSVDTIEGGNTVVKGKNIIIATGSDVKSLPGITIDEKRIVSSTGALALNEVPKKLVVIGAGYIGLEMGSVW 738
            AA+  A+ G K   IE+   +GG C + G IPSKAL H+     E     ++S  S  ++ S  ++     +   D  +   TR  +G +++N+     G   FI    ++V   +  +  +   NIIIATGS       +  +  RI  S   L L+  P+ +++ GAG IG E  S++
Sbjct:   23 AAMGLAKHGAKIAVIERHYNVGGGCTHWGTIPSKALRHAVSRIIEFNQNPLYSDNSRIIRSSFSDI-----LRHADSVIGQQTRMRQGFYERNQCELFSGEASFIDAHTIAVHYPDNTHETLTAANIIIATGSRPYHPAEVDFNHPRIYDSDSILQLDHEPQHVIIYGAGVIGCEYASIF 197          
BLAST of FC931441 vs. ExPASy Swiss-Prot
Match: GSHR_PLAFK (Glutathione reductase OS=Plasmodium falciparum (isolate K1 / Thailand) GN=GR2 PE=1 SV=3)

HSP 1 Score: 76.2554 bits (186), Expect = 2.007e-13
Identity = 54/186 (29.03%), Postives = 97/186 (52.15%), Query Frame = 1
Query:  211 AAIKAAQLGLKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHG--VKFSSVEVDLPAMMAQKDKAVSNLTRGIEGLFKKNKVTYVKGYGEFISPSEVSVDTIEGGNT---------VVKGKNIIIATGSDVKSLPGITIDEKRIVSSTGALALNEVPKKLVVIGAGYIGLEMGSV 735
            AA +AA+   K   +EK   LGGTC+NVGC+P K + +++ + H+ + +   +G   KFS    +LP ++ ++DK +  L         K+KV   +G   F+S + + +   +  N          +++G+NI+IA G+     P   I+    +SS     + E  KK+ ++G+GYI +E+ +V
Sbjct:   17 AARRAARHNAKVALVEK-SRLGGTCVNVGCVPKKIMFNAASV-HDILENSRHYGFDTKFS---FNLPLLVERRDKYIQRLNNIYRQNLSKDKVDLYEGTASFLSENRILIKGTKDNNNKDNGPLNEEILEGRNILIAVGNKPVFPPVKGIE--NTISSDEFFNIKE-SKKIGIVGSGYIAVELINV 194          
BLAST of FC931441 vs. ExPASy Swiss-Prot
Match: GSHR_PLAF7 (Glutathione reductase OS=Plasmodium falciparum (isolate 3D7) GN=GR3 PE=2 SV=3)

HSP 1 Score: 76.2554 bits (186), Expect = 2.007e-13
Identity = 54/186 (29.03%), Postives = 97/186 (52.15%), Query Frame = 1
Query:  211 AAIKAAQLGLKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHG--VKFSSVEVDLPAMMAQKDKAVSNLTRGIEGLFKKNKVTYVKGYGEFISPSEVSVDTIEGGNT---------VVKGKNIIIATGSDVKSLPGITIDEKRIVSSTGALALNEVPKKLVVIGAGYIGLEMGSV 735
            AA +AA+   K   +EK   LGGTC+NVGC+P K + +++ + H+ + +   +G   KFS    +LP ++ ++DK +  L         K+KV   +G   F+S + + +   +  N          +++G+NI+IA G+     P   I+    +SS     + E  KK+ ++G+GYI +E+ +V
Sbjct:   17 AARRAARHNAKVALVEK-SRLGGTCVNVGCVPKKIMFNAASV-HDILENSRHYGFDTKFS---FNLPLLVERRDKYIQRLNNIYRQNLSKDKVDLYEGTASFLSENRILIKGTKDNNNKDNGPLNEEILEGRNILIAVGNKPVFPPVKGIE--NTISSDEFFNIKE-SKKIGIVGSGYIAVELINV 194          
BLAST of FC931441 vs. ExPASy Swiss-Prot
Match: STHA_PSEU5 (Soluble pyridine nucleotide transhydrogenase OS=Pseudomonas stutzeri (strain A1501) GN=sthA PE=3 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 4.471e-13
Identity = 51/181 (28.18%), Postives = 80/181 (44.20%), Query Frame = 1
Query:  211 AAIKAAQLGLKTTCIEKRGALGGTCLNVGCIPSKALLHSSH--MYHEAMHSFASHGVK--FSSVEVDLPAMMAQKDKAVSNLTRGIEGLFKKNKVTYVKGYGEFISPSEVSVDTIEGGNTVVKGKNIIIATGSDVKSLPGITIDEKRIVSSTGALALNEVPKKLVVIGAGYIGLEMGSVWA 741
            AA+ A + G K   ++ R  +GG C ++G IPSKAL HS    M +     F   G    FS      P ++   +K +S         + +N++    G   F     V V  + G    +     +IATGS       I  +  RI  S   L L+  P+++++ GAG IG E  S+++
Sbjct:   20 AAMNAVKAGRKVAVVDNRPLVGGNCTHLGTIPSKALRHSVRQIMQYNTNPLFRQIGEPRWFS-----FPDVLKSAEKVISKQVTSRTSYYARNRIDTFFGTASFSDEQSVEVVCLNGMVEKLVANQFVIATGSRPYRPADIDFNHPRIYDSDTILTLSHTPRRMIIYGAGVIGCEYASIFS 195          
BLAST of FC931441 vs. ExPASy Swiss-Prot
Match: TRXR1_DROME (Thioredoxin reductase 1, mitochondrial OS=Drosophila melanogaster GN=Trxr-1 PE=1 SV=2)

HSP 1 Score: 74.3294 bits (181), Expect = 7.626e-13
Identity = 46/161 (28.57%), Postives = 80/161 (49.69%), Query Frame = 1
Query:  244 TTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHGVKF-SSVEVDLPAMMAQKDKAVSNLTRGIEGLFKKNKVTYVKGYGEFISPSEVSVDTIEGGNTVVKGKNIIIATGSDVKSLPGITIDEKRIVSSTGALALNEVPKKLVVIGAGYIGLE 723
            T  +  +  +GGTC+NVGCIP K L+H + +  EA+H  A++G      ++ D   ++      + ++        +  KV Y+ G G F+  S   +  ++ G   +  +  +IA G   +  P I    +  ++S    +L+  P K +V+GAGYIGLE
Sbjct:  149 TPTLGTKWGVGGTCVNVGCIPKK-LMHQASLLGEAVHEAAAYGWNVDEKIKPDWHKLVQSVQNHIKSVNWVTRVDLRDKKVEYINGLGSFVD-SHTLLAKLKSGERTITAQTFVIAVGGRPR-YPDIPGAVEYGITSDDLFSLDREPGKTLVVGAGYIGLE 306          
BLAST of FC931441 vs. ExPASy Swiss-Prot
Match: STHA_SALG2 (Soluble pyridine nucleotide transhydrogenase OS=Salmonella gallinarum (strain 287/91 / NCTC 13346) GN=sthA PE=3 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 7.626e-13
Identity = 47/178 (26.40%), Postives = 84/178 (47.19%), Query Frame = 1
Query:  211 AAIKAAQLGLKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAMHS--FASHGVKFSSVEVDLPAMMAQKDKAVSNLTRGIEGLFKKNKVTYVKGYGEFISPSEVSVDTIEGGNTVVKGKNIIIATGSDVKSLPGITIDEKRIVSSTGALALNEVPKKLVVIGAGYIGLEMGSVW 738
            AA+   + G +   IE+   +GG C + G IPSKAL H+     E  H+  ++ H     S   D+   +   D  ++  TR  +G +++N    ++G   FI    ++++  +G    +  +  +IA GS       +     RI  S   L+L+  P+ +++ GAG IG E  S++
Sbjct:   21 AAMGLVKQGARVAVIERYHNVGGGCTHWGTIPSKALRHAVSRIIEFNHNPLYSDHSRLLRSSFADI---LNHADNVINQQTRMRQGFYERNHCEILQGNAHFIDEHTLALECHDGTVETLTAEKFVIACGSRPYHPNDVDFSHPRIYDSDSILSLHHEPRHVIIYGAGVIGCEYASIF 195          
BLAST of FC931441 vs. ExPASy Swiss-Prot
Match: STHA_COLP3 (Soluble pyridine nucleotide transhydrogenase OS=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) GN=sthA PE=3 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 7.626e-13
Identity = 48/176 (27.27%), Postives = 79/176 (44.89%), Query Frame = 1
Query:  211 AAIKAAQLGLKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHGVKFSSVEVDLPAMMAQKDKAVSNLTRGIEGLFKKNKVTYVKGYGEFISPSEVSVDTIEGGNTVVKGKNIIIATGSDVKSLPGITIDEKRIVSSTGALALNEVPKKLVVIGAGYIGLEMGSVW 738
            AA+  A+   K   IE+   +GG C + G IPSKAL  S     E  +S           ++    +++     +        G + +N+V +++G   FI    +S+   +G    +  K I+IATGS       I  D  R+  S   L+L   P+ +++ GAG IG E  S++
Sbjct:   21 AAMNLAKRQKKVAIIERYHQVGGGCTHWGTIPSKALRQSVSRLIE-YNSNPLFNQNEQVKQLTFQDILSHASAVIQKQVSLRSGFYNRNRVEHIQGQASFIDAHTISISHPDGSVEKISAKQIMIATGSRPYRPDDIDFDHPRVYDSDSILSLKHAPQHVIIYGAGVIGSEYASIF 195          
BLAST of FC931441 vs. ExPASy Swiss-Prot
Match: GSHR_DEBHA (Glutathione reductase OS=Debaryomyces hansenii GN=GLR1 PE=3 SV=3)

HSP 1 Score: 74.3294 bits (181), Expect = 7.626e-13
Identity = 51/197 (25.89%), Postives = 89/197 (45.18%), Query Frame = 1
Query:  211 AAIKAAQLGLKTTCIEKR-GALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHGVKFSSVEV-----DLPAMMAQKDKAVSNLTRGIEGLFKKNKVTYVKGYGEFISPS---------EVSVDTIEGGNTVVKGKNIIIATGSDVKSLPGITIDEKRI------VSSTGALALNEVPKKLVVIGAGYIGLEMGSVW 738
            +A +AA  G K   IE +   +GGTC+NVGC+P K + ++  +  E  H   S+G+  +  +V     D      ++D  V  L    E   K   V Y+ G+  F + +         +  +  +E G    K + ++ A    + +  G  I+   +       +S G   L + PK + V+GAGYIG+E+  ++
Sbjct:   24 SARRAASYGAKVLLIESKFNKMGGTCVNVGCVPKKVMWYAGDL-AEKRHHLKSYGLSTTDDKVKYGDFDWSTFKDKRDAYVKRLNGIYERNLKNEGVDYIYGFAHFANSNGDVEVTLTGDQELSFLEEGKEFKKDEKLVFAGSKTLIATGGYAINPPNVEGHELGTTSDGFFELQKQPKSVAVVGAGYIGVELSGIF 219          
BLAST of FC931441 vs. ExPASy Swiss-Prot
Match: STHA_VIBPA (Soluble pyridine nucleotide transhydrogenase OS=Vibrio parahaemolyticus GN=sthA PE=3 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 9.960e-13
Identity = 48/176 (27.27%), Postives = 78/176 (44.32%), Query Frame = 1
Query:  211 AAIKAAQLGLKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHGVKFSSVEVDLPAMMAQKDKAVSNLTRGIEGLFKKNKVTYVKGYGEFISPSEVSVDTIEGGNTVVKGKNIIIATGSDVKSLPGITIDEKRIVSSTGALALNEVPKKLVVIGAGYIGLEMGSVW 738
            AA+   + GL    +EK  ++GG C + G IPSKAL H+     E  +S        +S+      ++      +   TR  +G + +N  T + G   FI    ++V   +G          +IATGS       +    +RI  S   L+L   P+ +++ GAG IG E  S++
Sbjct:   21 AAMGLTKAGLNVAIVEKESSVGGGCTHWGTIPSKALRHAVSRIIE-FNSNPLFCRNNTSLHATFSDILGHAKTVIDKQTRLRQGFYDRNDCTLLFGTARFIDTHSIAVMQNDGTEETYSADKFVIATGSRPYRPSDVDFLHERIYDSDSILSLKHDPRHIIIYGAGVIGCEYASIF 195          
The following BLAST results are available for this feature:
BLAST of FC931441 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 214
Match NameE-valueIdentityDescription
STHA_VIBC31.537e-1328.41Soluble pyridine nucleotide transhydrogenase OS=Vi... [more]
STHA_ERWCT2.007e-1328.89Soluble pyridine nucleotide transhydrogenase OS=Er... [more]
GSHR_PLAFK2.007e-1329.03Glutathione reductase OS=Plasmodium falciparum (is... [more]
GSHR_PLAF72.007e-1329.03Glutathione reductase OS=Plasmodium falciparum (is... [more]
STHA_PSEU54.471e-1328.18Soluble pyridine nucleotide transhydrogenase OS=Ps... [more]
TRXR1_DROME7.626e-1328.57Thioredoxin reductase 1, mitochondrial OS=Drosophi... [more]
STHA_SALG27.626e-1326.40Soluble pyridine nucleotide transhydrogenase OS=Sa... [more]
STHA_COLP37.626e-1327.27Soluble pyridine nucleotide transhydrogenase OS=Co... [more]
GSHR_DEBHA7.626e-1325.89Glutathione reductase OS=Debaryomyces hansenii GN=... [more]
STHA_VIBPA9.960e-1327.27Soluble pyridine nucleotide transhydrogenase OS=Vi... [more]

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Properties
Property NameValue
Genbank descriptionC34105B06EF PostHarvP1 Citrus clementina cDNA clone C34105B06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931441 ID=FC931441; Name=FC931441; organism=Citrus clementina; type=EST; length=741bp
GAATTCAATCGATTGATTGGAGAAAAAGTTGATTGAAAAATGGTGATGGC
AAGTCTTGCAAGAAGAAAGGCGTACGTGCTGTCAAGGAATCTCTCGAACT
CGTCGAATGGTAATGTTTTCAAGTACAGTTTCTCGCTTACAAGGGGCTTC
GCTTCGGCATCTGATGAGAACGACGTCGTCGTCATCGGAGGTGGACCTGG
TGGTTACGTGGCCGCCATCAAGGCCGCCCAGCTTGGTCTCAAGACCACGT
GCATCGAGAAGCGTGGGGCCCTCGGCGGCACGTGCCTTAACGTCGGATGC
ATCCCCTCTAAGGCACTTCTTCATTCTTCCCACATGTACCATGAAGCCAT
GCATTCTTTTGCCAGCCATGGTGTAAAGTTTTCTTCTGTTGAAGTTGATT
TGCCTGCTATGATGGCCCAAAAAGATAAAGCTGTGTCTAATCTTACAAGA
GGTATTGAAGGTCTATTCAAGAAGAACAAGGTAACCTATGTGAAAGGATA
TGGCGAGTTTATCTCCCCATCTGAGGTCTCTGTGGACACCATTGAAGGTG
GAAACACTGTCGTGAAAGGCAAGAATATCATAATTGCTACTGGTTCTGAC
GTTAAGTCTCTACCTGGGATCACCATTGATGAAAAGAGAATTGTGTCATC
CACTGGAGCTTTAGCATTGAATGAAGTTCCTAAGAAACTCGTGGTCATTG
GGGCAGGCTACATTGGGCTGGAGATGGGCTCAGTTTGGGCC
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