FC931441

Overview
NameFC931441
Unique NameFC931441
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length741
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig13004 contig Ccv1_Contig13004:43..783. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC931441 vs. ExPASy Swiss-Prot
Match: MERA_PSEAE (Mercuric reductase OS=Pseudomonas aeruginosa GN=merA PE=1 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 7.608e-21
Identity = 63/181 (34.81%), Postives = 98/181 (54.14%), Query Frame = 1
Query:  211 AAIKAAQLGLKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHGVKFSSVEVDLPAMMAQKDKAVSNLTRG-IEGLFKKN-KVTYVKGYGEFISPSEVSVDTIEGGNTVVKGKNIIIATGSD--VKSLPGITIDEKRIVSSTGALALNEVPKKLVVIGAGYIGLEMGSVWA 741
            AA+KA + G + T IE RG +GGTC+NVGC+PSK ++ ++H+ H    S    G+  +   +D   ++AQ+   V  L     EG+   N  +T V G   F     ++V   EGG  VV     ++ATG+   V  +PG  + E    +ST ALA + +P++L VIG+  + LE+   +A
Sbjct:  113 AALKAVEQGAQVTLIE-RGTIGGTCVNVGCVPSKIMIRAAHIAHLRRESPFDGGIAATVPTIDRSKLLAQQQARVDELRHAKYEGILGGNPAITVVHGEARFKDDQSLTVRLNEGGERVVMFDRCLVATGASPAVPPIPG--LKESPYWTSTEALASDTIPERLAVIGSSVVALELAQAFA 290          
BLAST of FC931441 vs. ExPASy Swiss-Prot
Match: MERA_BACCE (Mercuric reductase OS=Bacillus cereus GN=merA PE=1 SV=1)

HSP 1 Score: 100.523 bits (249), Expect = 9.937e-21
Identity = 66/179 (36.87%), Postives = 102/179 (56.98%), Query Frame = 1
Query:  211 AAIKAAQLGLKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHGVKFSSVEVDLPAMMAQKDKAVSNL-TRGIEGLFKKNKVTYVKGYGEFISPSEVSVDTIEGGNTVVKGKNIIIATG--SDVKSLPGITIDEKRIVSSTGALALNEVPKKLVVIGAGYIGLEMGSVW 738
            +AI+A  L  K   IE RG +GGTC+NVGC+PSK LL +  + H A ++    G+  S+  VDL  ++ QK+  V+ +       L        +KG  +F++ + V V+    GN +   K  +IATG  S   ++PG  +DE   ++ST  L L +VP +L VIG+GYIG+E+G ++
Sbjct:  184 SAIEAVALNAKVAMIE-RGTVGGTCVNVGCVPSKTLLRAGEINHLAKNN-PFVGLHTSASNVDLAPLVKQKNDLVTEMRNEKYVNLIDDYGFELIKGESKFVNENTVEVN----GNQIT-AKRFLIATGASSTAPNIPG--LDEVDYLTSTSLLELKKVPNRLTVIGSGYIGMELGQLF 353          
BLAST of FC931441 vs. ExPASy Swiss-Prot
Match: DLDH_MYCGE (Dihydrolipoyl dehydrogenase OS=Mycoplasma genitalium GN=pdhD PE=3 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 1.695e-20
Identity = 68/182 (37.36%), Postives = 101/182 (55.49%), Query Frame = 1
Query:  211 AAIKAAQLGLKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHGVKFSS-VEVDLPAMMAQKDKAVSNLTRGIEGLFKKNKVTYVKGYGEFISPSEVSVDTIEGGNTVVKGKNIIIATGSDVK--SLPGITIDEKR--IVSSTGALALNEVPKKLVVIGAGYIGLEMGSVWA 741
            AA  A +  LKT  IEK+   GG CLNVGCIP+K LL  + +    +H+   +G+  +   ++D   ++ QK + V  L  G++ + K  KV  ++G    I  ++V V+     NT     NII+ATGS  +  +LPG    ++   I+ ST ALAL  VPKK VV+G G IG+E   ++A
Sbjct:   17 AAEYAGKHKLKTLVIEKQ-YFGGVCLNVGCIPTKTLLKRAKIIDYLVHA-KDYGITINGQAKLDWKQLLKQKQEVVDKLVAGVKTIIKGAKVESIEGEATVIDKNKVQVN-----NTTYTTNNIIVATGSRPRYLTLPGFEKAQQAGFIIDSTQALALEGVPKKFVVVGGGVIGVEFAFLFA 191          
BLAST of FC931441 vs. ExPASy Swiss-Prot
Match: MERA_SHIFL (Mercuric reductase OS=Shigella flexneri GN=merA PE=3 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 4.932e-20
Identity = 61/181 (33.70%), Postives = 97/181 (53.59%), Query Frame = 1
Query:  211 AAIKAAQLGLKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHGVKFSSVEVDLPAMMAQKDKAVSNLTRG-IEGLFKKN-KVTYVKGYGEFISPSEVSVDTIEGGNTVVKGKNIIIATGSD--VKSLPGITIDEKRIVSSTGALALNEVPKKLVVIGAGYIGLEMGSVWA 741
            AA+KA + G + T IE RG +GGTC+NVGC+PSK ++ ++H+ H    S    G+  ++  +   A++AQ+   V  L     EG+ + N  +T + G   F     + V   +GG  VV     +IATG+   V  +PG  + +    +ST AL    +PK+L VIG+  + LE+   +A
Sbjct:  112 AALKAVEQGARVTLIE-RGTIGGTCVNVGCVPSKIMIRAAHIAHLRRESPFDGGIAATTPTIQRTALLAQQQARVDELRHAKYEGILEGNPAITVLHGSARFKDNRNLIVQLNDGGERVVAFDRCLIATGASPAVPPIPG--LKDTPYWTSTEALVSETIPKRLAVIGSSVVALELAQAFA 289          
BLAST of FC931441 vs. ExPASy Swiss-Prot
Match: MERA_ALCSP (Mercuric reductase OS=Alcaligenes sp. GN=merA PE=3 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 8.412e-20
Identity = 60/181 (33.15%), Postives = 96/181 (53.04%), Query Frame = 1
Query:  211 AAIKAAQLGLKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHGVKFSSVEVDLPAMMAQKDKAVSNLTRG-IEGLFKKN-KVTYVKGYGEFISPSEVSVDTIEGGNTVVKGKNIIIATGSD--VKSLPGITIDEKRIVSSTGALALNEVPKKLVVIGAGYIGLEMGSVWA 741
            AA+KA + G   T IE RG +GGTC+NVGC+PSK ++ ++H+ H    S    G+  +   +D   ++AQ+   V  L     EG+   N  +T + G   F     ++V   +GG  VV     ++ATG+   V  +PG  + E    +ST AL  + +P++L VIG+  + LE+   +A
Sbjct:  111 AALKAVEQGANVTLIE-RGTIGGTCVNVGCVPSKIMIRAAHIAHLRRESPFDGGIAATVPAIDRSKLLAQQQARVDELRHAKYEGILDDNPAITVLHGEARFKDDQSLAVRLNDGGERVVAFDRCLVATGASPAVPPIPG--LKESPYWTSTEALVSDTIPERLAVIGSSVVALELAQAFA 288          
BLAST of FC931441 vs. ExPASy Swiss-Prot
Match: MERA_STRLI (Mercuric reductase OS=Streptomyces lividans GN=merA PE=2 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 1.435e-19
Identity = 61/179 (34.08%), Postives = 95/179 (53.07%), Query Frame = 1
Query:  211 AAIKAAQLGLKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHGVKFSSVEVDLPAMMAQKDKAVSNL-TRGIEGLFKKNKVTYVKGYGEFISPSEVSVDTIEGGNTVVKGKNIIIATGSDVKSLPGIT-IDEKRIVSSTGALALNEVPKKLVVIGAGYIGLEMGSVWA 741
            AAI A   G     +E RG  GGTC+NVGC+PSKALL ++   H A  +    G++ +   +D PA+++ KD  V  L       L  +     V G   F     + V   +GG   V+  + +IATGS   + P I  +D+   ++ST A+ L ++P+ L+++G GY+GLE   ++A
Sbjct:   22 AAIAARNKGRSVVMVE-RGTTGGTCVNVGCVPSKALLAAAEARHGAQAASRFPGIQATEPALDFPALISGKDTLVGQLRAEKYTDLAAEYGWQIVHGTATFADGPMLEVALNDGGTATVEAAHYLIATGS-APTAPHIDGLDQVDYLTSTTAMELQQLPEHLLILGGGYVGLEQAQLFA 198          
BLAST of FC931441 vs. ExPASy Swiss-Prot
Match: MERA_ENTAG (Mercuric reductase OS=Enterobacter agglomerans GN=merA PE=3 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 2.448e-19
Identity = 62/181 (34.25%), Postives = 96/181 (53.04%), Query Frame = 1
Query:  211 AAIKAAQLGLKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHGVKFSSVEVDLPAMMAQKDKAVSNLTRG-IEGLFKKNK-VTYVKGYGEFISPSEVSVDTIEGGNTVVKGKNIIIATGSD--VKSLPGITIDEKRIVSSTGALALNEVPKKLVVIGAGYIGLEMGSVWA 741
            AA+KA + G + T IE RG +GGTC+NVGC+PSK ++  +H+ H    S    G+  +S  +    ++AQ+   V  L     EG+   N  +T + G   F     + V   EGG  VV     ++ATG+   V  +PG  + E    +ST ALA + +P++L VIG+  + LE+   +A
Sbjct:  113 AALKAVEQGAQVTLIE-RGTIGGTCVNVGCVPSKIMIRVAHIAHLRRESPFDGGMPPTSPTILRERLLAQQQARVEELRHAKYEGILDGNSAITVLHGEARFKDDQSLIVSLNEGGERVVMFDRCLVATGASPAVPPIPG--LKESPYWTSTEALASDTIPERLAVIGSSVVALELAQAFA 290          
BLAST of FC931441 vs. ExPASy Swiss-Prot
Match: MERA_STAES (Mercuric reductase OS=Staphylococcus epidermidis (strain ATCC 12228) GN=merA PE=3 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 3.197e-19
Identity = 64/179 (35.75%), Postives = 103/179 (57.54%), Query Frame = 1
Query:  211 AAIKAAQLGLKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHGVKFSSVEVDLPAMMAQKDKAVSNLTRG-IEGLFKKNKVTYVKGYGEFISPSEVSVDTIEGGNTVVKGKNIIIATGSD--VKSLPGITIDEKRIVSSTGALALNEVPKKLVVIGAGYIGLEMGSVW 738
            AAIKA + G K   +E RG +GGTC+N+GC+PSK +L +  +   A ++  + G++ S+   DL  +  QKD  VS + +     L ++     ++G   FI    + V+   G N  +  K+ +IATG+   V  +PG+  +E   ++ST AL L EVP++L VIG+GYI  E+G ++
Sbjct:  100 AAIKANENGAKVAMVE-RGTVGGTCVNIGCVPSKTMLRAGEINGLAQNNPFT-GLQTSTGAADLAQLTEQKDGLVSQMRQEKYIDLIEEYGFDLIRGEASFIDDKTIQVN---GQN--ITSKSFLIATGASPAVPEIPGM--NEVDYLTSTSALELKEVPQRLAVIGSGYIAAELGQMF 269          
BLAST of FC931441 vs. ExPASy Swiss-Prot
Match: MERA_STAAU (Mercuric reductase OS=Staphylococcus aureus GN=merA PE=3 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 3.197e-19
Identity = 64/179 (35.75%), Postives = 103/179 (57.54%), Query Frame = 1
Query:  211 AAIKAAQLGLKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHGVKFSSVEVDLPAMMAQKDKAVSNLTRG-IEGLFKKNKVTYVKGYGEFISPSEVSVDTIEGGNTVVKGKNIIIATGSD--VKSLPGITIDEKRIVSSTGALALNEVPKKLVVIGAGYIGLEMGSVW 738
            AAIKA + G K   +E RG +GGTC+N+GC+PSK +L +  +   A ++  + G++ S+   DL  +  QKD  VS + +     L ++     ++G   FI    + V+   G N  +  K+ +IATG+   V  +PG+  +E   ++ST AL L EVP++L VIG+GYI  E+G ++
Sbjct:  100 AAIKANENGAKVAMVE-RGTVGGTCVNIGCVPSKTMLRAGEINGLAQNNPFT-GLQTSTGAADLAQLTEQKDGLVSQMRQEKYIDLIEEYGFDLIRGEASFIDDKTIQVN---GQN--ITSKSFLIATGASPAVPEIPGM--NEVDYLTSTSALELKEVPQRLAVIGSGYIAAELGQMF 269          
BLAST of FC931441 vs. ExPASy Swiss-Prot
Match: MERA_SERMA (Mercuric reductase (Fragments) OS=Serratia marcescens GN=merA PE=3 SV=2)

HSP 1 Score: 94.7449 bits (234), Expect = 5.453e-19
Identity = 59/179 (32.96%), Postives = 93/179 (51.96%), Query Frame = 1
Query:  211 AAIKAAQLGLKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHGVKFSSVEVDLPAMMAQKDKAVSNLTRG-IEGLFKKNK-VTYVKGYGEFISPSEVSVDTIEGGNTVVKGKNIIIATGSDVKSLPGITIDEKRIVSSTGALALNEVPKKLVVIGAGYIGLEMGSVWA 741
            AA+KA + G + T IE RG +GGTC+NVGC+PSK ++ ++H+ H    S    G+  +   +    ++AQ+   V  L     EG+   N  +T   G   F    ++SV   EGG  VV     ++ATG+     P   + E    +ST AL  + +P++L VIG+  + LE+   +A
Sbjct:  113 AALKAVEQGAQVTLIE-RGTIGGTCVNVGCVPSKIMIRAAHIAHLRRESPFDGGMPPTPPTILRERLLAQQQARVEELRHAKYEGILDGNSAITVRHGEARFKDDRDLSVSLNEGGERVVMFDRCLVATGASPAMPPIPGLKESPYWTSTEALVSDTIPERLAVIGSSVVALELAQAFA 290          
The following BLAST results are available for this feature:
BLAST of FC931441 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 214
Match NameE-valueIdentityDescription
MERA_PSEAE7.608e-2134.81Mercuric reductase OS=Pseudomonas aeruginosa GN=me... [more]
MERA_BACCE9.937e-2136.87Mercuric reductase OS=Bacillus cereus GN=merA PE=1... [more]
DLDH_MYCGE1.695e-2037.36Dihydrolipoyl dehydrogenase OS=Mycoplasma genitali... [more]
MERA_SHIFL4.932e-2033.70Mercuric reductase OS=Shigella flexneri GN=merA PE... [more]
MERA_ALCSP8.412e-2033.15Mercuric reductase OS=Alcaligenes sp. GN=merA PE=3... [more]
MERA_STRLI1.435e-1934.08Mercuric reductase OS=Streptomyces lividans GN=mer... [more]
MERA_ENTAG2.448e-1934.25Mercuric reductase OS=Enterobacter agglomerans GN=... [more]
MERA_STAES3.197e-1935.75Mercuric reductase OS=Staphylococcus epidermidis (... [more]
MERA_STAAU3.197e-1935.75Mercuric reductase OS=Staphylococcus aureus GN=mer... [more]
MERA_SERMA5.453e-1932.96Mercuric reductase (Fragments) OS=Serratia marcesc... [more]

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Properties
Property NameValue
Genbank descriptionC34105B06EF PostHarvP1 Citrus clementina cDNA clone C34105B06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931441 ID=FC931441; Name=FC931441; organism=Citrus clementina; type=EST; length=741bp
GAATTCAATCGATTGATTGGAGAAAAAGTTGATTGAAAAATGGTGATGGC
AAGTCTTGCAAGAAGAAAGGCGTACGTGCTGTCAAGGAATCTCTCGAACT
CGTCGAATGGTAATGTTTTCAAGTACAGTTTCTCGCTTACAAGGGGCTTC
GCTTCGGCATCTGATGAGAACGACGTCGTCGTCATCGGAGGTGGACCTGG
TGGTTACGTGGCCGCCATCAAGGCCGCCCAGCTTGGTCTCAAGACCACGT
GCATCGAGAAGCGTGGGGCCCTCGGCGGCACGTGCCTTAACGTCGGATGC
ATCCCCTCTAAGGCACTTCTTCATTCTTCCCACATGTACCATGAAGCCAT
GCATTCTTTTGCCAGCCATGGTGTAAAGTTTTCTTCTGTTGAAGTTGATT
TGCCTGCTATGATGGCCCAAAAAGATAAAGCTGTGTCTAATCTTACAAGA
GGTATTGAAGGTCTATTCAAGAAGAACAAGGTAACCTATGTGAAAGGATA
TGGCGAGTTTATCTCCCCATCTGAGGTCTCTGTGGACACCATTGAAGGTG
GAAACACTGTCGTGAAAGGCAAGAATATCATAATTGCTACTGGTTCTGAC
GTTAAGTCTCTACCTGGGATCACCATTGATGAAAAGAGAATTGTGTCATC
CACTGGAGCTTTAGCATTGAATGAAGTTCCTAAGAAACTCGTGGTCATTG
GGGCAGGCTACATTGGGCTGGAGATGGGCTCAGTTTGGGCC
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