FC931462

Overview
NameFC931462
Unique NameFC931462
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length694
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC931462 vs. ExPASy Swiss-Prot
Match: AQP2_HUMAN (Aquaporin-2 OS=Homo sapiens GN=AQP2 PE=1 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 3.728e-11
Identity = 43/107 (40.19%), Postives = 60/107 (56.07%), Query Frame = 1
Query:  292 ELSSWSFYRAGIAEFVATFLFLYITVLTVMGVSKSKSKCPTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAVFYMIMQCLGAICGAAVV 612
            EL S +F RA  AEF+AT LF++  + + +   ++        +  IA AFG  I  LV     ISG HINPAVT    +   +S+ RA FY+  Q LGA+ GAA++
Sbjct:    3 ELRSIAFSRAVFAEFLATLLFVFFGLGSALNWPQALPS-----VLQIAMAFGLGIGTLVQALGHISGAHINPAVTVACLVGCHVSVLRAAFYVAAQLLGAVAGAALL 104          
BLAST of FC931462 vs. ExPASy Swiss-Prot
Match: BIB_DROME (Neurogenic protein big brain OS=Drosophila melanogaster GN=bib PE=1 SV=2)

HSP 1 Score: 68.1662 bits (165), Expect = 4.869e-11
Identity = 41/116 (35.34%), Postives = 60/116 (51.72%), Query Frame = 1
Query:  292 ELSSWSFYRAGIAEFVATFLFLYITVLTVMGVSKSKSKCPTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAVFYMIMQCLGAICGAAVVKGFQKSQYE 639
            E+ +  F+R+ I+E +A+F++++I      GV    S      +   A A G  +  L  C   ISG HINPAVT  L + R +S  RA  Y+  QC G I GAA++ G     Y+
Sbjct:   58 EIRTLEFWRSIISECLASFMYVFIVCGAAAGVGVGASVSSV--LLATALASGLAMATLTQCFLHISGAHINPAVTLALCVVRSISPIRAAMYITAQCGGGIAGAALLYGVTVPGYQ 171          
BLAST of FC931462 vs. ExPASy Swiss-Prot
Match: AQP_DROME (Aquaporin OS=Drosophila melanogaster GN=Drip PE=1 SV=2)

HSP 1 Score: 68.1662 bits (165), Expect = 4.869e-11
Identity = 38/101 (37.62%), Postives = 58/101 (57.43%), Query Frame = 1
Query:  313 YRAGIAEFVATFLFLYITVLTVMGVSKSKSKCPTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAVFYMIMQCLGAICGAAVVK 615
            +R  + E V TF  +++ V    G + S S      +  IA+ FG  +  +      +SG HINPAVT G  +  ++S+ +A FY+I+QC+GAI GAAV+K
Sbjct:   23 WRMLLGELVGTFFLIFVGV----GSTTSGS------VPQIAFTFGLTVATIAQGLGHLSGCHINPAVTLGFLIVGEISILKAAFYIIVQCVGAIAGAAVIK 113          
BLAST of FC931462 vs. ExPASy Swiss-Prot
Match: TIPA_PHAVU (Probable aquaporin TIP-type alpha OS=Phaseolus vulgaris PE=1 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 6.359e-11
Identity = 37/102 (36.27%), Postives = 60/102 (58.82%), Query Frame = 1
Query:  316 RAGIAEFVATFLFLYITVLTVMGVSK--SKSKCPTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAVFYMIMQCLGAICGAAVVK 615
            RA +AEF +TF+F++    + + + K    S      +  +A A    +FA V  +  +SGGH+NPAV+FG  +  ++S+ RAV+Y I Q LG+I  A V++
Sbjct:   21 RASLAEFASTFIFVFAGEGSGLALVKIYQDSAFSAGELLALALAHAFALFAAVSASMHVSGGHVNPAVSFGALIGGRISVIRAVYYWIAQLLGSIVAALVLR 122          
BLAST of FC931462 vs. ExPASy Swiss-Prot
Match: TIP22_ARATH (Probable aquaporin TIP2-2 OS=Arabidopsis thaliana GN=TIP2-2 PE=1 SV=2)

HSP 1 Score: 67.781 bits (164), Expect = 6.359e-11
Identity = 38/104 (36.54%), Postives = 59/104 (56.73%), Query Frame = 1
Query:  289 GELSSWSFYRAGIAEFVATFLFLYITVLTVMGVSK--SKSKCPTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAVFYMIMQCLGAI 594
            G+  S +  +A ++EF+AT LF++  V + +  +K  S +     G+  +A A    +F  V   A ISGGH+NPAVT GL +   +++    FY I QCLG+I
Sbjct:   10 GDSFSVASLKAYLSEFIATLLFVFAGVGSALAFAKLTSDAALDPAGLVAVAVAHAFALFVGVSIAANISGGHLNPAVTLGLAVGGNITVITGFFYWIAQCLGSI 113          
The following BLAST results are available for this feature:
BLAST of FC931462 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 95
Match NameE-valueIdentityDescription
AQP2_HUMAN3.728e-1140.19Aquaporin-2 OS=Homo sapiens GN=AQP2 PE=1 SV=1[more]
BIB_DROME4.869e-1135.34Neurogenic protein big brain OS=Drosophila melanog... [more]
AQP_DROME4.869e-1137.62Aquaporin OS=Drosophila melanogaster GN=Drip PE=1 ... [more]
TIPA_PHAVU6.359e-1136.27Probable aquaporin TIP-type alpha OS=Phaseolus vul... [more]
TIP22_ARATH6.359e-1136.54Probable aquaporin TIP2-2 OS=Arabidopsis thaliana ... [more]

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Properties
Property NameValue
Genbank descriptionC34105D04EF PostHarvP1 Citrus clementina cDNA clone C34105D04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931462 ID=FC931462; Name=FC931462; organism=Citrus clementina; type=EST; length=694bp
GACCAAAAGCTTCACTACCCTTTGTCCCAAACTCACGTTACAAATACCCC
CCGGCTCCCTCACTCTTAAATCGTGAGCCCGTTGTGCCATTTATTGATTC
AATTCACTCCCAAGAAACTTGAACCTATCTTGTCTATTAATTTTCACAAG
AACATAATGGAGGGCAAAGAAGAGGATGTAAGAGTGGGAGCAAATAGGTA
TCGAGAGAGTCAACCTATTGGAACCGCGGCTCAGACTCAGGATGTGAAGG
ATTACACGGAGCCACCTCCGGCGCCGCTCTTTGAGCCCGGCGAATTATCG
TCGTGGTCCTTTTACAGGGCTGGCATTGCGGAGTTTGTGGCCACGTTCTT
GTTTCTTTACATCACTGTTCTAACAGTGATGGGCGTGTCCAAATCCAAAA
GCAAATGTCCCACTGTGGGAATCCAGGGCATCGCTTGGGCTTTTGGCGGC
ATGATCTTCGCTCTAGTCTACTGCACTGCTGGCATTTCAGGGGGTCACAT
TAACCCAGCGGTGACATTCGGGCTGTTCTTGGCCCGAAAGCTGTCGCTTA
CCAGGGCAGTTTTTTACATGATAATGCAGTGTTTAGGGGCCATATGCGGT
GCCGCCGTTGTAAAGGGCTTTCAGAAAAGCCAATATGAAATGCTAGGCGG
CGGTGCCCACATGCTCAGCAAGGCTACAGCAAGGGAGATGGCCT
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