FC931464

Overview
NameFC931464
Unique NameFC931464
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length702
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC931464 vs. ExPASy Swiss-Prot
Match: CAN_SCHPO (Carbonic anhydrase OS=Schizosaccharomyces pombe GN=SPBP8B7.05c PE=1 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 1.392e-13
Identity = 44/109 (40.37%), Postives = 62/109 (56.88%), Query Frame = 2
Query:  284 KNPDLYGALAKGQSPKFLVFACSDSRVCPSHILNFQPGEAFMVRNIANMVPPYDQKKYSGAGAAIEYAVLHLKVENIVVIGHSCCGGIKGLMSIPDNGTTASDFIEEWV 610
            K P  + A    Q+P+ L   CSDSRV  + ILN  PGE F+ RNIAN+VP  D      A A +EY+V  LKV++I+V GH  CGG+   +     G   ++ ++ W+
Sbjct:   58 KYPSFFTATKDIQTPQVLWIGCSDSRVPETTILNLLPGEVFVHRNIANVVPRSD----INALAVMEYSVTVLKVKHIIVCGHYGCGGVAAAL-----GPNLNNLLDHWL 157          
BLAST of FC931464 vs. ExPASy Swiss-Prot
Match: CAN_ECOLI (Carbonic anhydrase 2 OS=Escherichia coli (strain K12) GN=can PE=1 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 1.392e-13
Identity = 39/99 (39.39%), Postives = 59/99 (59.60%), Query Frame = 2
Query:  281 EKNPDLYGALAKGQSPKFLVFACSDSRVCPSHILNFQPGEAFMVRNIANMVPPYDQKKYSGAGAAIEYAVLHLKVENIVVIGHSCCGGIKGLMSIPDNG 577
            E++P  +  LA+ Q P+FL   CSDSRV    +   +PGE F+ RN+AN+V   D    S     ++YAV  L+VE+I++ GH  CGG++  +  P+ G
Sbjct:   20 EEDPGFFEKLAQAQKPRFLWIGCSDSRVPAERLTGLEPGELFVHRNVANLVIHTDLNCLS----VVQYAVDVLEVEHIIICGHYGCGGVQAAVENPELG 114          
BLAST of FC931464 vs. ExPASy Swiss-Prot
Match: CAN_HAEIN (Carbonic anhydrase 2 OS=Haemophilus influenzae GN=can PE=1 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 3.102e-13
Identity = 42/118 (35.59%), Postives = 64/118 (54.24%), Query Frame = 2
Query:  224 IDPVERMKTGFIQFKTEKYEKNPDLYGALAKGQSPKFLVFACSDSRVCPSHILNFQPGEAFMVRNIANMVPPYDQKKYSGAGAAIEYAVLHLKVENIVVIGHSCCGGIKGLMSIPDNG 577
            +D ++++      +     E+N   +  LA  Q+P +L   CSDSRV    + N +PGE F+ RN+AN V   D    S     ++YAV  LK+E+I++ GH+ CGGI   M+  D G
Sbjct:    1 MDKIKQLFANNYSWAQRMKEENSTYFKELADHQTPHYLWIGCSDSRVPAEKLTNLEPGELFVHRNVANQVIHTDFNCLS----VVQYAVDVLKIEHIIICGHTNCGGIHAAMADKDLG 114          
The following BLAST results are available for this feature:
BLAST of FC931464 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 23
Match NameE-valueIdentityDescription
CAN_SCHPO1.392e-1340.37Carbonic anhydrase OS=Schizosaccharomyces pombe GN... [more]
CAN_ECOLI1.392e-1339.39Carbonic anhydrase 2 OS=Escherichia coli (strain K... [more]
CAN_HAEIN3.102e-1335.59Carbonic anhydrase 2 OS=Haemophilus influenzae GN=... [more]

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Properties
Property NameValue
Genbank descriptionC34105D07EF PostHarvP1 Citrus clementina cDNA clone C34105D07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931464 ID=FC931464; Name=FC931464; organism=Citrus clementina; type=EST; length=702bp
GAACTCTTCAATACTGGTCCGAGATCGTGAAAAGAAGCGAGCAAGTTGAA
GTCGGCAGAATCCCGGAGAAATTGAAAAGAGAGAAGACATGGCAAACGAC
GCGTACGAGGATGCCATTGCAGGACTGACCAAGCTCCTCAGCGAGAAAAG
CGACCTCGAAGGAGTCGCCGCTGCGAAAATCAAGCAGATAACGGCCGATT
TAGAAGCGGCCGGTTCGAGGGACATTGACCCGGTGGAGAGGATGAAAACC
GGGTTCATTCAATTTAAGACAGAGAAATACGAGAAGAATCCTGATTTGTA
CGGTGCACTGGCCAAAGGCCAAAGCCCCAAGTTTCTGGTATTTGCATGCT
CAGACTCTCGAGTATGTCCATCCCATATCCTCAATTTTCAACCAGGAGAG
GCGTTTATGGTTCGAAACATTGCCAATATGGTCCCTCCATATGACCAGAA
AAAATACTCTGGAGCAGGTGCAGCCATTGAATATGCGGTGCTACATCTGA
AGGTGGAGAATATTGTAGTCATTGGACACAGTTGCTGTGGTGGTATAAAG
GGGCTCATGTCTATCCCTGATAATGGGACCACTGCGAGTGATTTCATAGA
AGAGTGGGTCNAAATCTGTTCATCTGCCAAGTCCAAGGTGAAAAAAGAAA
TGCATGATTTGAGTTTTGAGGAGCAATGCNAGAACTGTGAAAAGAGGCTG
TG
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