FC931468
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC931468 vs. ExPASy Swiss-Prot
Match: EI3F1_DROPE (Eukaryotic translation initiation factor 3 subunit F-1 OS=Drosophila persimilis GN=eIF3-S5-1 PE=3 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 4.028e-16 Identity = 52/171 (30.41%), Postives = 92/171 (53.80%), Query Frame = 2 Query: 101 VIVHPLVLLSIVDNYNRVAKDTRKRVVGVLLGSSFKGTVDVSNSYAVPFEEDDKDPGIWFLDHNYHESMYSMFKRINAKEHVVGWYSTGPKLRENDLDIHQLFHNYVPNPVLVIIDVQPKELGIPTKAYYDVEEVKENATQKSQKVFVHVPSEIAAHEVEEIGVEHLLRDV 613 V VHP+VL +VD + R ++ RV+G LLGS KG V+V+N + VP +E D + +Y MY + +++N+ E VVGW++TG + + IH+ + NPV + +D + + ++Y ++ K+ +F +P E+ ++E E G++ L + V Sbjct: 8 VRVHPVVLFQVVDAFERRNAESH-RVIGTLLGSVEKGVVEVTNCFCVPHKEHDDQVEA---ELSYALDMYDLNRKVNSNEAVVGWWATGNDVTNHSSVIHEYYARECNNPVHLTVDTSLQGGRMGLRSYVCIQLGVPGG--KTGCMFTPIPVELTSYEPETFGLKLLQKTV 172
BLAST of FC931468 vs. ExPASy Swiss-Prot
Match: EIF3F_USTMA (Eukaryotic translation initiation factor 3 subunit F OS=Ustilago maydis GN=UM00175 PE=3 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 6.871e-16 Identity = 67/220 (30.45%), Postives = 111/220 (50.45%), Query Frame = 2 Query: 83 SRPIEKVIVHPLVLLSIVDNYNRVAKDTRKRVVGVLLGSSFKGTVDVSNSYAVPFEEDDKDPGIWFLDHNYHESMYSMFKRINAKEHVVGWYSTGPKLRENDLDIHQLF------HNYVPNPVLVIID-VQPKELGIPTKAYYDVEEVKENATQKSQK-VFVHVPSEIAAHEVEEIGVEHLLRDVKDTTISTLANE-VTGKLTAXKGLDARLREIRGYLD 715 SR + V VHP+ L SI+D+Y R D + RV+G LLG+ + +++ N +AVP ED ++ + +D YH SMY + +++ E +VGWY+T P+L I + H V + ID +P LGI K+Y AT K++ VF+ +P+ + H E +++S LA++ ++ LT L L++++ LD Sbjct: 26 SRSVTGVHVHPVALFSILDHYLR-RNDGQHRVIGTLLGTRTESEIEIKNCFAVPHLEDAEEGQVQ-VDMEYHRSMYELCQKVRPDEVIVGWYATSPELNTYSALIQDFYSRETAPHQAVHLTMDTTIDGSKPSGLGI--KSYI---SSPLGATPKAENCVFLPLPTNL-LHSTPE-----------HSSLSLLASQNISSPLTDLDALAVSLKQVQSQLD 226
BLAST of FC931468 vs. ExPASy Swiss-Prot
Match: EIF3F_BOMMO (Eukaryotic translation initiation factor 3 subunit F OS=Bombyx mori GN=eIF3-S5 PE=2 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 1.531e-15 Identity = 59/209 (28.23%), Postives = 102/209 (48.80%), Query Frame = 2 Query: 101 VIVHPLVLLSIVDNYNRVAKDTRKRVVGVLLGSSFKGTVDVSNSYAVPFEEDDKDPGIWFLDHNYHESMYSMFKRINAKEHVVGWYSTGPKLRENDLDIHQLFHNYVPNPVLVIIDVQPKELGIPTKAYYDVEEVKENATQKSQKVFVHVPSEIAAHEVEEIGVEHLLRDV----KDTTISTLANEVTGKLTAXKGLDARLREIRGYLD 715 V VHP+VL IVD Y R D+ RV+G L G+S KG V+V+N + VP +E + NY +Y + +R+N+ E +VGW++TG ++ + IH+ + PV V +D + +AY V N Q +F V + +E E +G++ + V + ++ +++ ++A L++ L + Y D Sbjct: 7 VKVHPVVLFQIVDAYERRNADSH-RVIGTLWGTSDKGVVEVTNCFCVPHKEHADQVEA---ELNYAMDVYELNRRVNSSESIVGWWATGNEVTNHSSVIHEYYSRECREPVHVTLDTSLAGGRMGLRAYVCVPLGVPNGKQGC--MFTPVDVTLTCYEPEIVGLQVCQKTVSGGGRGSSGVAAGSDLAQVMSAASSLESLLEQALQYAD 209
BLAST of FC931468 vs. ExPASy Swiss-Prot
Match: CSN6B_ARATH (COP9 signalosome complex subunit 6b OS=Arabidopsis thaliana GN=CSN6B PE=1 SV=2) HSP 1 Score: 80.8777 bits (198), Expect = 7.596e-15 Identity = 62/223 (27.80%), Postives = 105/223 (47.09%), Query Frame = 2 Query: 107 VHPLVLLSIVDNYNRVAKDTRK----------------------RVVGVLLGSSFKGTVDVSNSYAVPFEEDDKDPGIWFLDHNYHESMYSMFKRINAKEHVVGWYSTGPKLRENDLDIHQLFHNYVPNPVLVIID--VQPKELGIPTKAYYDVEEVKENATQKSQKVFVHVPSEIAAHEVEEIGVEHL--LRDVKDTTIST-LANEVTGKLTAXKGLDARLR 694 +HPLV+L+I D++ RV RV G ++G TV++ NS+ + F DP + LD ++ E ++K++ +V+GWYSTG E+D+ IH+ + +PV V+++ + + +P Y V + Q +FVH I E E I V+H+ L+ + +T LA +TG +A K L++R+R Sbjct: 13 LHPLVMLNISDHFTRVKTQLNPPAASCATGNGSNNADAMLLQNPRVYGCVIGLQRGRTVEIFNSFELIF-----DPALDTLDRSFLEKKQELYKKVFPDFYVLGWYSTGSDATESDMHIHKALMDINESPVYVLLNPAINHAQKDLPVTIYESEFHVIDGI---PQSIFVHTSYTIETVEAERISVDHVAHLKPSDGGSAATQLAAHLTGIHSAIKMLNSRIR 227
BLAST of FC931468 vs. ExPASy Swiss-Prot
Match: EIF3F_DICDI (Eukaryotic translation initiation factor 3 subunit F OS=Dictyostelium discoideum GN=eif3f PE=3 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 2.210e-14 Identity = 55/211 (26.07%), Postives = 101/211 (47.87%), Query Frame = 2 Query: 101 VIVHPLVLLSIVDNYNR--VAKDTRKRVVGVLLGSSFKGTVDVSNSYAVPFEEDDKDPGIWFLDHNYHESMYSMFKRINAKEHVVGWYSTGPKLRENDLDIHQLFHNYVPN--PVLVIID--VQPKELGIPTKAYYDVEEVKENATQKSQKVFVHVPSEIAAHEVEEIGVEHLLRDVKDTTISTLANEVTGKLTAXKGLDARLREIRGYLD 715 V VHP+V+ +I+D+Y R V +D RV+G LLG + G +++ N + V E ++ ++ Y M + + + +E ++GWY+TG + EN + I+ + + + N P+ + +D + +GI Y + N F +P EI E E G+E + + D ++L +E+ + LD L I Y++ Sbjct: 15 VKVHPVVIFNILDHYIRRNVGQD---RVIGTLLGFNNDGVLEIRNCFPVVHSETEQIA----VEMEYQRKMLDLHLKSSPREPIIGWYATGNDINENSVHINNFYRDEMGNSTPIHLTVDTGLTNDTMGIHA---YMAHNLSLNPESSLGSYFSQLPLEILTFEAENAGLESIAQTKYDQQSTSLLSELESLQGSLTKLDEMLESITSYIE 215
BLAST of FC931468 vs. ExPASy Swiss-Prot
Match: CSN6A_ARATH (COP9 signalosome complex subunit 6a OS=Arabidopsis thaliana GN=CSN6A PE=1 SV=2) HSP 1 Score: 77.411 bits (189), Expect = 8.399e-14 Identity = 59/223 (26.46%), Postives = 103/223 (46.19%), Query Frame = 2 Query: 107 VHPLVLLSIVDNYNRVAKDTRK----------------------RVVGVLLGSSFKGTVDVSNSYAVPFEEDDKDPGIWFLDHNYHESMYSMFKRINAKEHVVGWYSTGPKLRENDLDIHQLFHNYVPNPVLVIID--VQPKELGIPTKAYYDVEEVKENATQKSQKVFVHVPSEIAAHEVEEIGVEHL--LRDVKDTTIST-LANEVTGKLTAXKGLDARLR 694 +HPLV+++I D+Y RV RV G ++G TV++ NS+ + + DP LD ++ E ++K++ +++GWYSTG E+D+ IH+ + +PV V+++ + + +P Y V + Q +F H I E E I V+H+ L+ + +T LA +TG +A K L++R+R Sbjct: 13 LHPLVIVNISDHYTRVKTQLNPPASICASGHGSNNGEAMFQQNPRVYGCVIGVQRGRTVEIFNSFELLY-----DPSTQTLDRSFLEKKQELYKKVFPDFYILGWYSTGSDAEESDMHIHKALMDINESPVYVLLNPAINHTQKDLPVTIYESELHVIDGI---PQLIFAHTSYTIETVEAERISVDHVAHLKPSDGGSAATQLAAHLTGIHSAIKMLNSRIR 227
BLAST of FC931468 vs. ExPASy Swiss-Prot
Match: CSN6_XENLA (COP9 signalosome complex subunit 6 OS=Xenopus laevis GN=cops6 PE=2 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 1.097e-13 Identity = 52/208 (25.00%), Postives = 103/208 (49.52%), Query Frame = 2 Query: 101 VIVHPLVLLSIVDNYNRVAKDTRK--RVVGVLLGSSFKGTVDVSNSYAVPFEEDDKDPGIWFLDHNYHESMYSMFKRINAKEHVVGWYSTGPKLRENDLDIHQLFHNYVPNPVLVIIDVQPKELGIPTKAYYDVEEVKENATQKSQKVFVHVPSEIAAHEVEEIGVEHLLRDVKDTT--ISTLANEVTGKLTAXKGLDARLREIRGYL 712 V +HPLV+L+I D++ R+ + +V+G L+G ++V NS+ + + +D+ I + Y+ + FK++ +GWY+TG +D+ +H+ + +P+ + ++ K +P Y E V + ++ + + +A E E IGV+H+ R + ST+A + + +A K L +R+R I Y+ Sbjct: 32 VALHPLVILNISDHWIRMRSQEGRPMQVIGALIGKQEGRNIEVMNSFELLSQINDEKITI---NKEYYYTKEEQFKQVFKDMEFLGWYTTGGTPDPSDIHVHKQVCEIIESPLFLKLNPMTKHTDLPVSVY---ESVIDIVNGEATMLLAELSYTLATEEAERIGVDHVARMTATGSGENSTVAEHLIAQHSAIKMLHSRVRLILEYV 233
BLAST of FC931468 vs. ExPASy Swiss-Prot
Match: CSN6_DICDI (COP9 signalosome complex subunit 6 OS=Dictyostelium discoideum GN=csn6 PE=1 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 1.871e-13 Identity = 62/232 (26.72%), Postives = 110/232 (47.41%), Query Frame = 2 Query: 35 TQRDSNMDVIKTQQISSRPIEKVIVHPLVLLSIVDNYNRVAKDTRK----RVVGVLLGSSFKGTVDVSNSYAVPFEEDDKDPGIWFLDHNYHESMYSMFKRINAKEHVVGWYSTGPKLRENDLDIHQLFHNYVPNPVLVIIDV-QPKELGIPTKAYYDVEEVKENATQKSQKVFVHVPSEIAAHEVEEIGVEHLLR-DVKDTTISTLANEVTGKLTAXKGLDARLREIRGYL 712 T D+N V++ SS +V +HPLVL++I D++ R + RV+GV+LG V++ NS+ + + DK LD Y Y +++ ++GWYSTG ++ ++D+ +H+ + +P+ +++D PK +P Y E + +FV P +I E E IGV H+ + + S L + + A L+ R++ + YL Sbjct: 8 TTTDANKLVLEKSANSSGL--EVDLHPLVLINISDHFTRTKVQSNYQDNCRVIGVILGVQNGRNVEICNSFEMVYATVDKQ---LVLDIEYLRKKY---EQLFPLYDLLGWYSTGSQVSKDDILLHKQISEHNESPLYLMLDTDSPKSKDLPVIIY---ESELHIVNDEPTTIFVKTPYKIQTGEAERIGVNHIAKVTPSGSEGSGLTSHLFTMHNAISMLNIRVKALSDYL 228
BLAST of FC931468 vs. ExPASy Swiss-Prot
Match: CSN6_XENTR (COP9 signalosome complex subunit 6 OS=Xenopus tropicalis GN=cops6 PE=2 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 3.192e-13 Identity = 51/208 (24.52%), Postives = 103/208 (49.52%), Query Frame = 2 Query: 101 VIVHPLVLLSIVDNYNRVAKDTRK--RVVGVLLGSSFKGTVDVSNSYAVPFEEDDKDPGIWFLDHNYHESMYSMFKRINAKEHVVGWYSTGPKLRENDLDIHQLFHNYVPNPVLVIIDVQPKELGIPTKAYYDVEEVKENATQKSQKVFVHVPSEIAAHEVEEIGVEHLLRDVKDTT--ISTLANEVTGKLTAXKGLDARLREIRGYL 712 V +HPLV+L+I D++ R+ + +V+G L+G ++V NS+ + + +++ I + Y+ + FK++ +GWY+TG +D+ +H+ + +P+ + ++ K +P Y E V + ++ + + +A E E IGV+H+ R + ST+A + + +A K L +R+R I Y+ Sbjct: 33 VALHPLVILNISDHWIRMRSQEGRPVQVIGALIGKQEGRNIEVMNSFELLSQINEEKITI---NKEYYYTKEEQFKQVFKDMEFLGWYTTGGTPDPSDIHVHKQVCEIIESPLFLKLNPMTKHTDLPVSVY---ESVIDIVNGEATMLLAELSYTLATEEAERIGVDHVARMTATGSGENSTVAEHLIAQHSAIKMLHSRVRLILEYV 234
BLAST of FC931468 vs. ExPASy Swiss-Prot
Match: CSN6_PONAB (COP9 signalosome complex subunit 6 OS=Pongo abelii GN=COPS6 PE=2 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 3.192e-13 Identity = 50/208 (24.04%), Postives = 103/208 (49.52%), Query Frame = 2 Query: 101 VIVHPLVLLSIVDNYNRVAKDTRK--RVVGVLLGSSFKGTVDVSNSYAVPFEEDDKDPGIWFLDHNYHESMYSMFKRINAKEHVVGWYSTGPKLRENDLDIHQLFHNYVPNPVLVIIDVQPKELGIPTKAYYDVEEVKENATQKSQKVFVHVPSEIAAHEVEEIGVEHLLRDVKDTT--ISTLANEVTGKLTAXKGLDARLREIRGYL 712 V +HPLV+L+I D++ R+ + +V+G L+G ++V NS+ + ++ +D Y+ + FK++ + +GWY+TG +D+ +H+ + +P+ + ++ K +P + E V + ++ +F + +A E E IGV+H+ R + ST+A + + +A K L +R++ I Y+ Sbjct: 42 VALHPLVILNISDHWIRMRSQEGRPVQVIGALIGKQEGRNIEVMNSFELLSHTVEEKI---IIDKEYYYTKEEQFKQVFKELEFLGWYTTGGPPDPSDIHVHKQVCEIIESPLFLKLNPMTKHTDLPVSVF---ESVIDIINGEATMLFAELTYTLATEEAERIGVDHVARMTATGSGENSTVAEHLIAQHSAIKMLHSRVKLILEYV 243 The following BLAST results are available for this feature:
BLAST of FC931468 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 46
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Sequences
The
following sequences are available for this feature:
EST sequence >FC931468 ID=FC931468; Name=FC931468; organism=Citrus clementina; type=EST; length=717bpback to top |