FC931475

Overview
NameFC931475
Unique NameFC931475
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length713
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC931475 vs. ExPASy Swiss-Prot
Match: ADT4_MOUSE (ADP/ATP translocase 4 OS=Mus musculus GN=Slc25a31 PE=2 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 2.424e-13
Identity = 51/185 (27.57%), Postives = 75/185 (40.54%), Query Frame = 3
Query:   84 RTVTSPLDVIKIRFQVQLEPTTSWALLNGHISRPSKYTGMFQATKDIFREEGLWGFWRGNVPALLMVMPYSAIQFTVLHKLKTFAAGSSKAENHINLSAYLSYVSGALAGCAATVGSYPFDLLRTIL----ASQGEPKVYPTMRSAFVDIVSTRGFRGLYAGLSPTLVEIIPYAGLQFGTYDTFK 626
            +T  +P++ +K+  QVQ          +  IS  ++Y GM      I RE+G   +WRGN+  ++   P  A+ F    K K         E         +  SG  AG  +    YP D  RT L        E + +  +    + I  + G  GLY G   ++  II Y    FG YDT K
Sbjct:   36 KTAVAPIERVKLLLQVQAS--------SKQISPEARYKGMLDCLVRIPREQGFLSYWRGNLANVIRYFPTQALNFAFKDKYKELFMSGVNKEKQFWRWFLANLASGGAAGATSLCVVYPLDFARTRLGVDIGKGPEQRQFTGLGDCIMKIAKSDGLIGLYQGFGVSVQGIIVYRASYFGAYDTVK 212          
BLAST of FC931475 vs. ExPASy Swiss-Prot
Match: ADT2_PONAB (ADP/ATP translocase 2 OS=Pongo abelii GN=SLC25A5 PE=2 SV=3)

HSP 1 Score: 75.8702 bits (185), Expect = 2.424e-13
Identity = 51/185 (27.57%), Postives = 79/185 (42.70%), Query Frame = 3
Query:   84 RTVTSPLDVIKIRFQVQLEPTTSWALLNGHISRPSKYTGMFQATKDIFREEGLWGFWRGNVPALLMVMPYSAIQFTVLHKLKTFAAGSSKAENHINLSAYLSYVSGALAGCAATVGSYPFDLLRTILASQ----GEPKVYPTMRSAFVDIVSTRGFRGLYAGLSPTLVEIIPYAGLQFGTYDTFK 626
            +T  +P++ +K+  QVQ          +  I+   +Y G+      I +E+G+  FWRGN+  ++   P  A+ F    K K    G              +  SG  AG  +    YP D  RT LA+     G  + +  +    V I  + G +GLY G + ++  II Y    FG YDT K
Sbjct:   23 KTAVAPIERVKLLLQVQHA--------SKQITADKQYKGIIDCVVRIPKEQGVLSFWRGNLANVIRHFPTQALNFAFKDKYKQIFLGGVDKRTQFWRYFAGNLASGGAAGATSLCFVYPLDFARTRLAADVGKAGAEREFRGLGDCLVKIYKSDGIKGLYQGFNVSVQGIIIYRAAYFGIYDTAK 199          
BLAST of FC931475 vs. ExPASy Swiss-Prot
Match: UCPB_DICDI (Mitochondrial substrate carrier family protein ucpB OS=Dictyostelium discoideum GN=ucpB PE=3 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 3.166e-13
Identity = 49/184 (26.63%), Postives = 85/184 (46.20%), Query Frame = 3
Query:   90 VTSPLDVIKIRFQVQLEPTTSWALLNGHISRPSKYTGMFQATKDIFREEGLWGFWRGNVPALLMVMPYSAIQFTVLHKLKTFAAGSSKAENHINLSAYLSYVSGALAGCAATVGSYPFDLLRTILASQGEPKVYPTMRSAFVDIVSTRGFRGLYAGLSPTLVEIIPYAGLQFGTYDTFKRWTMD 641
            V++P+DV+K RFQ+  E   S +L            G+   T  I + EG+   ++G  P+LL    YS ++      +K +   S+   N ++        SGAL+G      + P DL++  + +  +   Y ++ SAF +I++  G +GL+ G+ PT          Q  +YD  K   +D
Sbjct:   24 VSNPVDVLKTRFQIHGEGIDSKSL------------GLVNGTIKIIKNEGISAMYKGLTPSLLREATYSTLRMGGYDVIKNYFIDSNGKTNLLS-----KVTSGALSGALGACITSPTDLIKVRMQASSKGVKYDSISSAFKEIIAKEGIKGLWKGVGPTTQRAALLTASQIPSYDHIKHMILD 190          
BLAST of FC931475 vs. ExPASy Swiss-Prot
Match: ADT3_PIG (ADP/ATP translocase 3 OS=Sus scrofa GN=SLC25A6 PE=2 SV=3)

HSP 1 Score: 75.485 bits (184), Expect = 3.166e-13
Identity = 52/187 (27.81%), Postives = 80/187 (42.78%), Query Frame = 3
Query:   84 RTVTSPLDVIKIRFQVQLEPTTSWALLNGHISRPSKYTGMFQATKDIFREEGLWGFWRGNVPALLMVMPYSAIQFTVLHKLKTFAAGSSKAENHINLSAYL--SYVSGALAGCAATVGSYPFDLLRTILAS----QGEPKVYPTMRSAFVDIVSTRGFRGLYAGLSPTLVEIIPYAGLQFGTYDTFK 626
            +T  +P++ +K+  QVQ          +  I+   +Y G+      I +E+G+  FWRGN+  ++   P  A+ F    K K    G    + H     Y   +  SG  AG  +    YP D  RT LA+        + +  +    V I  + G RGLY G + ++  II Y    FG Y T K
Sbjct:   23 KTAVAPIERVKLLLQVQHA--------SKQIAADKQYKGIVDCIVRIPKEQGVLSFWRGNLANVIRYFPTQALNFAFKDKYKQIFLGG--VDKHTQFWRYFAGNLASGGAAGATSLCFVYPLDFARTRLAADVGKSATEREFKGLGDCLVKITKSDGIRGLYQGFNVSVQGIIIYRAAYFGVYGTAK 199          
BLAST of FC931475 vs. ExPASy Swiss-Prot
Match: ADT4_BOVIN (ADP/ATP translocase 4 OS=Bos taurus GN=SLC25A31 PE=2 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 5.400e-13
Identity = 50/185 (27.03%), Postives = 76/185 (41.08%), Query Frame = 3
Query:   84 RTVTSPLDVIKIRFQVQLEPTTSWALLNGHISRPSKYTGMFQATKDIFREEGLWGFWRGNVPALLMVMPYSAIQFTVLHKLKTFAAGSSKAENHINLSAYLSYVSGALAGCAATVGSYPFDLLRTILASQ----GEPKVYPTMRSAFVDIVSTRGFRGLYAGLSPTLVEIIPYAGLQFGTYDTFK 626
            +T  +P++ +K+  QVQ          +  IS  ++Y G+      I RE+G   +WRGN+  ++   P  A+ F    K K         E         +  SG  AG  +    YP D  RT L +      E + +  +    + I  + G  GLY G   ++  II Y    FG YDT K
Sbjct:   39 KTTVAPIERVKLLLQVQAS--------SKQISPEAQYKGIVDCLVRIPREQGFLSYWRGNLANVIRYFPTQALNFAFKDKYKQLFMSGVNKEKQFWRWFLANLASGGAAGATSLCVVYPLDFARTRLGADIGKGPEERQFKGLGDCIMKIAKSDGIVGLYQGFGVSVQGIIVYRASYFGAYDTVK 215          
BLAST of FC931475 vs. ExPASy Swiss-Prot
Match: S2540_RAT (Solute carrier family 25 member 40 OS=Rattus norvegicus GN=Slc25a40 PE=2 SV=2)

HSP 1 Score: 74.3294 bits (181), Expect = 7.053e-13
Identity = 56/199 (28.14%), Postives = 88/199 (44.22%), Query Frame = 3
Query:   90 VTSPLDVIKIRFQVQLEPTTS---WALLNG---HI------------SRPSKYTGMFQATKDIFREEGLWGFWRGNVPALLMVMPYSAIQFTVLHKLKTFAAGSSKAENHINLSAYLSYVSGALAGCAATVGSYPFDLLRTILASQGEPKVYPTMRSAFVDIVSTRGFRGLYAGLSPTLVEIIPYAGLQFGTYDTFKRW 632
            + +PLDV+KIR Q Q  P      +   NG   HI             +P  + G   A   I R EG+   W G  P L+M +P + I FT   +L TF   +   EN       +  V+G +A   A     P +L+RT +  Q +   Y  +       VS  G+  L+ G +PT++  +P++ + +  Y+  +RW
Sbjct:   33 MVTPLDVVKIRLQAQNNPFPKGKCFLYSNGLMDHICICEEESKKAWYKKPGNFHGTLDAFLKIVRNEGIKSLWSGLPPTLVMAVPATVIYFTCYEQLSTFLK-TKLGENETR----IPIVAGIVARFGAVTMISPLELIRTKM--QSKTFSYKELYQIVSMKVSEDGWISLWKGWAPTILRDVPFSAMYWYNYENLRRW 224          

HSP 2 Score: 70.8626 bits (172), Expect = 7.798e-12
Identity = 52/196 (26.53%), Postives = 89/196 (45.41%), Query Frame = 3
Query:   87 TVTSPLDVIKIRFQVQLEPTTSWALLNGHISRPSKYTGMFQATKDIFREEGLWGFWRGNVPALLMVMPYSAIQFTVLHKLKTFAAGSSKAENHINLSAYLSYVSGALAGCAATVGSYPFDLLRTILASQ---------GEPKVYPTMRSAFVDIVSTRGFRGLYAGLSPTLVEIIPYAGLQFGTYDTFKRWTMDWN 647
            T+ SPL++I+ + Q                S+   Y  ++Q       E+G    W+G  P +L  +P+SA+ +     L+ +    S       +   +++ +GAL+G  A V + PFD+++T   +Q          EP    T  S   +IV+ RGF GL+ GL P LV+I+P   +   +Y+  K +    N
Sbjct:  158 TMISPLELIRTKMQ----------------SKTFSYKELYQIVSMKVSEDGWISLWKGWAPTILRDVPFSAMYWYNYENLRRWLCEKSDLYESTFM---INFTAGALSGSFAAVATLPFDVVKTQKQTQLWTHEYCKFPEPLDMSTW-SIMKNIVADRGFSGLFTGLIPRLVKIVPACAIMISSYELGKGFFQQQN 333          
BLAST of FC931475 vs. ExPASy Swiss-Prot
Match: MCFE_DICDI (Mitochondrial substrate carrier family protein E OS=Dictyostelium discoideum GN=mcfE PE=3 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.203e-12
Identity = 55/178 (30.90%), Postives = 82/178 (46.07%), Query Frame = 3
Query:   99 PLDVIKIRFQVQLEPTTSWALLNGHISRPSKYTGMFQATKDIFREEGLWGFWRGNVPALLMVMPYSAIQFTVLHKLKTFAAGSSKAENHINLSAYLSYVSGALAGCAATVGSYPFDLLRTILASQ--GEPKVYPTMRSAFVDIVSTRGFRGLYAGLSPTLVEIIPYAGLQFGTYDTFK 626
            P+D+IK R QVQ    T+   LN +    + Y G F A K I +EEG+ G +RG +PAL    P+  I F+V  K K+  +     E    L       SG  AG  A   + P D+++T +  Q   E ++Y  M  +F  I+   G +    G+   +  I P   L   +Y+  K
Sbjct:  126 PMDIIKQRLQVQ----TNTQKLNPN---QTYYKGSFHAGKIILQEEGIRGLYRGFMPALATYGPFVGIYFSVYEKCKSTISSLLSKEKDQYLPIPYQLGSGFFAGAFAAAVTCPLDVIKTRIQVQRSTEKQIYKGMWDSFKTILKEEGPKAFVKGMGARIWWIAPGNALTIASYEQLK 296          
BLAST of FC931475 vs. ExPASy Swiss-Prot
Match: CMC3_CAEEL (Probable calcium-binding mitochondrial carrier F17E5.2 OS=Caenorhabditis elegans GN=F17E5.2 PE=2 SV=4)

HSP 1 Score: 73.559 bits (179), Expect = 1.203e-12
Identity = 51/186 (27.42%), Postives = 88/186 (47.31%), Query Frame = 3
Query:   84 RTVTSPLDVIKIRFQVQLEPTTSWALLNGHISRPSKYTGMFQATKDIFREEGLWGFWRGNVPALLMVMPYSAIQFTVLHKLKTFAAGSSKAENHINLSAYLSYVSGALAGCAATVGSYPFDLLRTILASQG-EPK--VYP-TMRSAFVDIVSTRGFRGLYAGLSPTLVEIIPYAGLQFGTYDTFKR 629
            +T   P++V+K R  ++           G + +     GMF     ++ +EG+  F++G +P LL ++PY+ I  TV   LK+             + A L+   G  +     + SYP  L+RT L ++   PK    P TM   F  I+ T GF GLY G++P  +++IP   + +  Y+  ++
Sbjct:  355 QTAIYPMEVMKTRLALRR---------TGQLDK-----GMFHFAHKMYTKEGIKCFYKGYLPNLLGIIPYAGIDLTVYESLKSMYTKYYTEHTEPGVLALLA--CGTCSSTCGQLASYPLALVRTRLQARAISPKNSTQPDTMVGQFKHILQTEGFTGLYRGITPNFMKVIPAVSISYVVYEKVRK 524          

HSP 2 Score: 68.5514 bits (166), Expect = 3.870e-11
Identity = 47/181 (25.97%), Postives = 80/181 (44.20%), Query Frame = 3
Query:   84 RTVTSPLDVIKIRFQVQLEPTTSWALLNGHISRPSKYTGMFQATKDIFREEGLWGFWRGNVPALLMVMPYSAIQFTVLHKLKTFAAGSSKAENHINLSAYLSYVSGALAGCAATVGSYPFDLLRTILASQGEPKVYPTMRSAFVDIVSTRGFRGLYAGLSPTLVEIIPYAGLQFGTYDTFK 626
            RT T+P D IK+  QV    T                 G+      +  E G+  FWRGN   ++ + P SA++F    ++K +     + +    LS     ++G+ AG  +    YP ++++T LA +   ++   M      + +  G +  Y G  P L+ IIPYAG+    Y++ K
Sbjct:  259 RTCTAPFDRIKVYLQVNSTKTNK--------------LGVVSCVHLLHAEGGIKSFWRGNGINVIKIAPESAMKFMCYDQIKRW---MQEYKGGAELSTIERLLAGSSAGAISQTAIYPMEVMKTRLALRRTGQLDKGMFHFAHKMYTKEGIKCFYKGYLPNLLGIIPYAGIDLTVYESLK 422          
BLAST of FC931475 vs. ExPASy Swiss-Prot
Match: ADT_NEUCR (ADP,ATP carrier protein OS=Neurospora crassa GN=acp PE=3 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.203e-12
Identity = 50/187 (26.74%), Postives = 82/187 (43.85%), Query Frame = 3
Query:   84 RTVTSPLDVIKIRFQVQLEPTTSWALLNGHISRPSKYTGMFQATKDIFREEGLWGFWRGNVPALLMVMPYSAIQFTVLHKLKTFAAGSSKAENHINLSAYLSYVSGALAGCAATVGSYPFDLLRTILAS------QGEPKVYPTMRSAFVDIVSTRGFRGLYAGLSPTLVEIIPYAGLQFGTYDTFK 626
            +T  +P++ IK+  Q Q E   +     G + R  +Y G+    K    +EG+   WRGN   ++   P  A+ F    K K         + +    A  +  SG  AG  + +  Y  D  RT LA+      +G  + +  +   +   +++ G  GLY G  P++  I+ Y GL FG YD+ K
Sbjct:   28 KTAAAPIERIKLLVQNQDEMIRA-----GRLDR--RYNGIIDCFKRTTADEGVMALWRGNTANVIRYFPTQALNFAFRDKFKKMFGYKKDVDGYWKWMAG-NLASGGAAGATSLLFVYSLDYARTRLANDAKSAKKGGERQFNGLVDVYRKTIASDGIAGLYRGFGPSVAGIVVYRGLYFGLYDSIK 206          
BLAST of FC931475 vs. ExPASy Swiss-Prot
Match: S2539_BOVIN (Solute carrier family 25 member 39 OS=Bos taurus GN=SLC25A39 PE=2 SV=2)

HSP 1 Score: 73.1738 bits (178), Expect = 1.571e-12
Identity = 61/241 (25.31%), Postives = 97/241 (40.25%), Query Frame = 3
Query:   96 SPLDVIKIRFQVQ--------LEPTTSWAL------------------LNGHISR----------------PSKYTGMFQATKDIFREEGLWGFWRGNVPALLMVMPYSAIQFTVLHKLKTFAAGSSKAENHINLSAYLSYVSGALAGCAATVGSYPFDLLRTILASQGEPKVYPTMRSAFVDIVSTRGFRGLYAGLSPTLVEIIPYAGLQFGTYDTFKRWTMDWNRIRSSNTSSTGADII 692
            +PLDV+K+R Q Q        + P+  W+L                   NG +                  P+++TG   A   I R EG    W G    L+M +P +A  FT   +LK F  G +     +    Y   V+GALA         P +L+RT L  Q +   Y  + +     V+  G+R L+ G  PT +  +P++ L +  Y+  K W    + +R  + +S G   +
Sbjct:   30 TPLDVVKVRLQSQRPSVASELMPPSRLWSLSYAKLPSSLRSTGKCLLYCNGVLEPLYLCPNGARCATWFQDPTRFTGTMDAFVKIVRHEGTRTLWSGLPATLVMTVPATAAYFTAYDQLKAFLCGRA-----LTSDLYAPMVAGALARLGTVTVISPLELVRTKL--QAQHLSYRELGTCVRAAVAQGGWRSLWLGWGPTALRDVPFSALYWFNYELVKSWL---SGLRPKDQTSVGISFV 260          
The following BLAST results are available for this feature:
BLAST of FC931475 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 143
Match NameE-valueIdentityDescription
ADT4_MOUSE2.424e-1327.57ADP/ATP translocase 4 OS=Mus musculus GN=Slc25a31 ... [more]
ADT2_PONAB2.424e-1327.57ADP/ATP translocase 2 OS=Pongo abelii GN=SLC25A5 P... [more]
UCPB_DICDI3.166e-1326.63Mitochondrial substrate carrier family protein ucp... [more]
ADT3_PIG3.166e-1327.81ADP/ATP translocase 3 OS=Sus scrofa GN=SLC25A6 PE=... [more]
ADT4_BOVIN5.400e-1327.03ADP/ATP translocase 4 OS=Bos taurus GN=SLC25A31 PE... [more]
S2540_RAT7.053e-1328.14Solute carrier family 25 member 40 OS=Rattus norve... [more]
MCFE_DICDI1.203e-1230.90Mitochondrial substrate carrier family protein E O... [more]
CMC3_CAEEL1.203e-1227.42Probable calcium-binding mitochondrial carrier F17... [more]
ADT_NEUCR1.203e-1226.74ADP,ATP carrier protein OS=Neurospora crassa GN=ac... [more]
S2539_BOVIN1.571e-1225.31Solute carrier family 25 member 39 OS=Bos taurus G... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionC34105E06EF PostHarvP1 Citrus clementina cDNA clone C34105E06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931475 ID=FC931475; Name=FC931475; organism=Citrus clementina; type=EST; length=713bp
GGTTGATGGAGGAGCAGGAGCCGGGGCAATGGAAACGAATGGTGATCGAT
GCGTCTGCAGGCGCGATTGCCGGTGGAATCTCACGTACTGTAACTTCGCC
TCTTGATGTTATTAAGATCCGTTTCCAGGTTCAATTGGAGCCCACGACTT
CATGGGCGTTGCTAAATGGACATATATCCAGGCCATCAAAATATACTGGC
ATGTTCCAAGCAACGAAGGATATATTTAGAGAGGAAGGTTTATGGGGTTT
CTGGCGTGGCAATGTGCCAGCCTTACTTATGGTTATGCCATACAGTGCCA
TACAATTTACAGTGTTACACAAATTGAAAACATTCGCTGCTGGTTCTTCC
AAGGCAGAAAATCATATTAATTTAAGCGCTTACTTGTCTTATGTCAGTGG
GGCATTAGCTGGGTGTGCAGCTACTGTTGGATCATATCCATTTGATCTTT
TACGAACCATATTAGCGTCACAAGGAGAACCTAAGGTGTATCCCACAATG
AGGTCTGCATTTGTTGATATTGTCAGCACCCGAGGCTTTAGAGGACTGTA
TGCTGGGCTGTCACCTACACTGGTTGAGATTATTCCTTATGCTGGCCTGC
AATTCGGCACATATGATACATTCAAGCGCTGGACCATGGACTGGAACCGG
ATAAGATCTTCTAATACAAGCTCAACTGGTGCAGACATAATCTTTCAGTT
TTCAGCTTTTGTC
back to top