FC931475

Overview
NameFC931475
Unique NameFC931475
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length713
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC931475 vs. ExPASy Swiss-Prot
Match: S2539_MOUSE (Solute carrier family 25 member 39 OS=Mus musculus GN=Slc25a39 PE=2 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 3.740e-14
Identity = 51/170 (30.00%), Postives = 79/170 (46.47%), Query Frame = 3
Query:  183 PSKYTGMFQATKDIFREEGLWGFWRGNVPALLMVMPYSAIQFTVLHKLKTFAAGSSKAENHINLSAYLSYVSGALAGCAATVGSYPFDLLRTILASQGEPKVYPTMRSAFVDIVSTRGFRGLYAGLSPTLVEIIPYAGLQFGTYDTFKRWTMDWNRIRSSNTSSTGADII 692
            P+++TG   A   I R EG    W G    L+M +P +AI FT   +LK F  G S     +    Y   V+GALA         P +L+RT L  Q +   Y  + S+    V+  G+R L+ G  PT +  +P++ L +  Y+  K W    + +R  + +S G   +
Sbjct:  101 PTRFTGTLDAFVKIVRHEGTRTLWSGLPATLVMTVPATAIYFTAYDQLKAFLCGQS-----LTSDLYAPMVAGALARMGTVTVVSPLELVRTKL--QAQHVSYRELASSVQAAVTQGGWRSLWLGWGPTALRDVPFSALYWFNYELVKSWL---SGLRPKDQTSVGISFV 260          
BLAST of FC931475 vs. ExPASy Swiss-Prot
Match: ADT4_MACFA (ADP/ATP translocase 4 OS=Macaca fascicularis GN=SLC25A31 PE=2 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 3.740e-14
Identity = 52/185 (28.11%), Postives = 76/185 (41.08%), Query Frame = 3
Query:   84 RTVTSPLDVIKIRFQVQLEPTTSWALLNGHISRPSKYTGMFQATKDIFREEGLWGFWRGNVPALLMVMPYSAIQFTVLHKLKTFAAGSSKAENHINLSAYLSYVSGALAGCAATVGSYPFDLLRTIL----ASQGEPKVYPTMRSAFVDIVSTRGFRGLYAGLSPTLVEIIPYAGLQFGTYDTFK 626
            +T  +P++ +K+  QVQ          +  IS  ++Y GM      I RE+G + FWRGN+  ++   P  A+ F    K K         E         +  SG  AG  +    YP D  RT L        E + +  +    + I  + G  GLY G   ++  II Y    FG YDT K
Sbjct:   35 KTAVAPIERVKLLLQVQAS--------SKQISPEARYKGMVDCLVRIPREQGFFSFWRGNLANVIRYFPTQALNFAFKDKYKQLFMSGVNKEKQFWRWFLANLASGGAAGATSLCVVYPLDFARTRLGVDIGKGPEERQFKGLGDCIMKIAKSDGIAGLYQGFGVSVQGIIVYRASYFGAYDTVK 211          
BLAST of FC931475 vs. ExPASy Swiss-Prot
Match: ADT4_HUMAN (ADP/ATP translocase 4 OS=Homo sapiens GN=SLC25A31 PE=1 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 3.740e-14
Identity = 52/185 (28.11%), Postives = 76/185 (41.08%), Query Frame = 3
Query:   84 RTVTSPLDVIKIRFQVQLEPTTSWALLNGHISRPSKYTGMFQATKDIFREEGLWGFWRGNVPALLMVMPYSAIQFTVLHKLKTFAAGSSKAENHINLSAYLSYVSGALAGCAATVGSYPFDLLRTIL----ASQGEPKVYPTMRSAFVDIVSTRGFRGLYAGLSPTLVEIIPYAGLQFGTYDTFK 626
            +T  +P++ +K+  QVQ          +  IS  ++Y GM      I RE+G + FWRGN+  ++   P  A+ F    K K         E         +  SG  AG  +    YP D  RT L        E + +  +    + I  + G  GLY G   ++  II Y    FG YDT K
Sbjct:   35 KTAVAPIERVKLLLQVQAS--------SKQISPEARYKGMVDCLVRIPREQGFFSFWRGNLANVIRYFPTQALNFAFKDKYKQLFMSGVNKEKQFWRWFLANLASGGAAGATSLCVVYPLDFARTRLGVDIGKGPEERQFKGLGDCIMKIAKSDGIAGLYQGFGVSVQGIIVYRASYFGAYDTVK 211          
BLAST of FC931475 vs. ExPASy Swiss-Prot
Match: ADT3_BOVIN (ADP/ATP translocase 3 OS=Bos taurus GN=SLC25A6 PE=2 SV=3)

HSP 1 Score: 77.7962 bits (190), Expect = 6.379e-14
Identity = 52/185 (28.11%), Postives = 79/185 (42.70%), Query Frame = 3
Query:   84 RTVTSPLDVIKIRFQVQLEPTTSWALLNGHISRPSKYTGMFQATKDIFREEGLWGFWRGNVPALLMVMPYSAIQFTVLHKLKTFAAGSSKAENHINLSAYLSYVSGALAGCAATVGSYPFDLLRTILASQ----GEPKVYPTMRSAFVDIVSTRGFRGLYAGLSPTLVEIIPYAGLQFGTYDTFK 626
            +T  +P++ +K+  QVQ          +  I+   +Y G+      I +E+G+  FWRGN+  ++   P  A+ F    K K    G              +  SG  AG  +    YP D  RT LA+     G  + +  +    V I  + G RGLY G + ++  II Y    FG YDT K
Sbjct:   23 KTAVAPIERVKLLLQVQHA--------SKQIAADKQYKGIVDCIVRIPKEQGVLSFWRGNLANVIRYFPTQALNFAFKDKYKQIFLGGVDKRTQFWRYFAGNLASGGAAGATSLCFVYPLDFARTRLAADVGKSGSEREFRGLGDCLVKITKSDGIRGLYQGFNVSVQGIIIYRAAYFGIYDTAK 199          
BLAST of FC931475 vs. ExPASy Swiss-Prot
Match: ADT2_BOVIN (ADP/ATP translocase 2 OS=Bos taurus GN=SLC25A5 PE=2 SV=3)

HSP 1 Score: 77.7962 bits (190), Expect = 6.379e-14
Identity = 52/185 (28.11%), Postives = 79/185 (42.70%), Query Frame = 3
Query:   84 RTVTSPLDVIKIRFQVQLEPTTSWALLNGHISRPSKYTGMFQATKDIFREEGLWGFWRGNVPALLMVMPYSAIQFTVLHKLKTFAAGSSKAENHINLSAYLSYVSGALAGCAATVGSYPFDLLRTILASQ----GEPKVYPTMRSAFVDIVSTRGFRGLYAGLSPTLVEIIPYAGLQFGTYDTFK 626
            +T  +P++ +K+  QVQ          +  I+   +Y G+      I +E+G+  FWRGN+  ++   P  A+ F    K K    G              +  SG  AG  +    YP D  RT LA+     G  + +  +    V I  + G RGLY G + ++  II Y    FG YDT K
Sbjct:   23 KTAVAPIERVKLLLQVQHA--------SKQITADKQYKGIIDCVVRIPKEQGVLSFWRGNLANVIRYFPTQALNFAFKDKYKQIFLGGVDKRTQFWRYFAGNLASGGAAGATSLCFVYPLDFARTRLAADVGKAGAEREFRGLGDCLVKIYKSDGIRGLYQGFNVSVQGIIIYRAAYFGIYDTAK 199          
BLAST of FC931475 vs. ExPASy Swiss-Prot
Match: ADT2_ANOGA (ADP,ATP carrier protein 2 OS=Anopheles gambiae GN=AGAP002358 PE=3 SV=2)

HSP 1 Score: 77.7962 bits (190), Expect = 6.379e-14
Identity = 52/183 (28.42%), Postives = 76/183 (41.53%), Query Frame = 3
Query:   84 RTVTSPLDVIKIRFQVQLEPTTSWALLNGHISRPSKYTGMFQATKDIFREEGLWGFWRGNVPALLMVMPYSAIQFTVLHKLKTFAAGSSKAENHINLSAYLSYVSGALAGCAATVGSYPFDLLRTILASQ----GEPKVYPTMRSAFVDIVSTRGFRGLYAGLSPTLVEIIPYAGLQFGTYDT 620
            +T  +P++ +K+  QVQ         ++  I+   +Y GM      I RE+G   FWRGN+  ++   P  A+ F    K K    G              +  SG +AG  +    YP D  RT LA+      E + +  +      I  T G  GLY G   ++  II Y    FG YDT
Sbjct:   25 KTAVAPIERVKLLLQVQH--------ISKQIAEADRYKGMVDCFVRIPREQGFSAFWRGNLANVIRYFPTQALNFAFKDKYKQVFLGGVDKNTQFTRYFIGNLASGGMAGATSLCFVYPLDFARTRLAADVGKGAEAREFKGLGDCISKIFKTDGLVGLYRGFGVSVQGIIIYRAAYFGFYDT 199          
BLAST of FC931475 vs. ExPASy Swiss-Prot
Match: ADT1_HUMAN (ADP/ATP translocase 1 OS=Homo sapiens GN=SLC25A4 PE=1 SV=4)

HSP 1 Score: 77.7962 bits (190), Expect = 6.379e-14
Identity = 53/187 (28.34%), Postives = 80/187 (42.78%), Query Frame = 3
Query:   84 RTVTSPLDVIKIRFQVQLEPTTSWALLNGHISRPSKYTGMFQATKDIFREEGLWGFWRGNVPALLMVMPYSAIQFTVLHKLKTFAAGSSKAENHINLSAYL--SYVSGALAGCAATVGSYPFDLLRTILASQ----GEPKVYPTMRSAFVDIVSTRGFRGLYAGLSPTLVEIIPYAGLQFGTYDTFK 626
            +T  +P++ +K+  QVQ          +  IS   +Y G+      I +E+G   FWRGN+  ++   P  A+ F    K K    G    + H     Y   +  SG  AG  +    YP D  RT LA+        + +  +    + I  + G RGLY G + ++  II Y    FG YDT K
Sbjct:   23 KTAVAPIERVKLLLQVQHA--------SKQISAEKQYKGIIDCVVRIPKEQGFLSFWRGNLANVIRYFPTQALNFAFKDKYKQLFLGG--VDRHKQFWRYFAGNLASGGAAGATSLCFVYPLDFARTRLAADVGKGAAQREFHGLGDCIIKIFKSDGLRGLYQGFNVSVQGIIIYRAAYFGVYDTAK 199          
BLAST of FC931475 vs. ExPASy Swiss-Prot
Match: S2539_HUMAN (Solute carrier family 25 member 39 OS=Homo sapiens GN=SLC25A39 PE=2 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 8.331e-14
Identity = 50/170 (29.41%), Postives = 78/170 (45.88%), Query Frame = 3
Query:  183 PSKYTGMFQATKDIFREEGLWGFWRGNVPALLMVMPYSAIQFTVLHKLKTFAAGSSKAENHINLSAYLSYVSGALAGCAATVGSYPFDLLRTILASQGEPKVYPTMRSAFVDIVSTRGFRGLYAGLSPTLVEIIPYAGLQFGTYDTFKRWTMDWNRIRSSNTSSTGADII 692
            P+++TG   A   I R EG    W G    L+M +P +AI FT   +LK F  G +     +    Y   V+GALA         P +L+RT L  Q +   Y  + +     V+  G+R L+ G  PT +  +P++ L +  Y+  K W    N +R  + +S G   +
Sbjct:  101 PTRFTGTMDAFVKIVRHEGTRTLWSGLPATLVMTVPATAIYFTAYDQLKAFLCGRA-----LTSDLYAPMVAGALARLGTVTVISPLELMRTKL--QAQHVSYRELGACVRTAVAQGGWRSLWLGWGPTALRDVPFSALYWFNYELVKSWL---NGLRPKDQTSVGMSFV 260          
BLAST of FC931475 vs. ExPASy Swiss-Prot
Match: ADT_DICDI (Mitochondrial substrate carrier family protein ancA OS=Dictyostelium discoideum GN=ancA PE=1 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 8.331e-14
Identity = 58/228 (25.44%), Postives = 93/228 (40.79%), Query Frame = 3
Query:    6 MEEQEPGQWKRMVIDXXXXXXXXXXXRTVTSPLDVIKIRFQVQLEPTTSWALLNGHISRPSKYTGMFQATKDIFREEGLWGFWRGNVPALLMVMPYSAIQFTVLHKLKTFAAGSSKAENHINLSAYLSYVSGALAGCAATVGSYPFDLLRTILASQ---GEPKVYPTMRSAFVDIVSTRGFRGLYAGLSPTLVEIIPYAGLQFGTYDTFKRWTMDWNRIRSSNTSSTG 680
            M  Q+       V D           +T+ +P++ +K+  QVQ   T         I+   +Y G+      + +E+G+   WRGN+  ++   P  A+ F    K K F    +  EN        + +SG  AG  + +  YP D  RT LA+    G  + +  + +    I    G  GLY G   ++  I  Y    FG YDT K   +  N  ++S  +S G
Sbjct:    1 MSNQKKNDVSSFVKDSLIGGTAGGVSKTIVAPIERVKLLLQVQSAST--------QIAADKQYKGIVDCFVRVSKEQGVISLWRGNLANVIRYFPTQALNFAFKDKYKKFFVRHTAKENPTKFFIG-NLLSGGAAGATSLLFVYPLDFARTRLAADVGTGSARQFTGLGNCISSIYKRDGLIGLYRGFGVSVGGIFVYRAAFFGGYDTAKGILLGENNKKASFWASWG 219          
BLAST of FC931475 vs. ExPASy Swiss-Prot
Match: ADT1_RABIT (ADP/ATP translocase 1 OS=Oryctolagus cuniculus GN=SLC25A4 PE=2 SV=3)

HSP 1 Score: 77.411 bits (189), Expect = 8.331e-14
Identity = 53/187 (28.34%), Postives = 80/187 (42.78%), Query Frame = 3
Query:   84 RTVTSPLDVIKIRFQVQLEPTTSWALLNGHISRPSKYTGMFQATKDIFREEGLWGFWRGNVPALLMVMPYSAIQFTVLHKLKTFAAGSSKAENHINLSAYL--SYVSGALAGCAATVGSYPFDLLRTILASQ----GEPKVYPTMRSAFVDIVSTRGFRGLYAGLSPTLVEIIPYAGLQFGTYDTFK 626
            +T  +P++ +K+  QVQ          +  IS   +Y G+      I +E+G   FWRGN+  ++   P  A+ F    K K    G    + H     Y   +  SG  AG  +    YP D  RT LA+        + +  + +    I  + G RGLY G + ++  II Y    FG YDT K
Sbjct:   23 KTAVAPIERVKLLLQVQHA--------SKQISAEKQYKGIIDCVVRIPKEQGFLSFWRGNLANVIRYFPTQALNFAFKDKYKQIFLGG--VDRHKQFWRYFAGNLASGGAAGATSLCFVYPLDFARTRLAADVGKGAAQREFSGLGNCLTKIFKSDGLRGLYQGFNVSVQGIIIYRAAYFGVYDTAK 199          
The following BLAST results are available for this feature:
BLAST of FC931475 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 143
Match NameE-valueIdentityDescription
S2539_MOUSE3.740e-1430.00Solute carrier family 25 member 39 OS=Mus musculus... [more]
ADT4_MACFA3.740e-1428.11ADP/ATP translocase 4 OS=Macaca fascicularis GN=SL... [more]
ADT4_HUMAN3.740e-1428.11ADP/ATP translocase 4 OS=Homo sapiens GN=SLC25A31 ... [more]
ADT3_BOVIN6.379e-1428.11ADP/ATP translocase 3 OS=Bos taurus GN=SLC25A6 PE=... [more]
ADT2_BOVIN6.379e-1428.11ADP/ATP translocase 2 OS=Bos taurus GN=SLC25A5 PE=... [more]
ADT2_ANOGA6.379e-1428.42ADP,ATP carrier protein 2 OS=Anopheles gambiae GN=... [more]
ADT1_HUMAN6.379e-1428.34ADP/ATP translocase 1 OS=Homo sapiens GN=SLC25A4 P... [more]
S2539_HUMAN8.331e-1429.41Solute carrier family 25 member 39 OS=Homo sapiens... [more]
ADT_DICDI8.331e-1425.44Mitochondrial substrate carrier family protein anc... [more]
ADT1_RABIT8.331e-1428.34ADP/ATP translocase 1 OS=Oryctolagus cuniculus GN=... [more]

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Properties
Property NameValue
Genbank descriptionC34105E06EF PostHarvP1 Citrus clementina cDNA clone C34105E06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931475 ID=FC931475; Name=FC931475; organism=Citrus clementina; type=EST; length=713bp
GGTTGATGGAGGAGCAGGAGCCGGGGCAATGGAAACGAATGGTGATCGAT
GCGTCTGCAGGCGCGATTGCCGGTGGAATCTCACGTACTGTAACTTCGCC
TCTTGATGTTATTAAGATCCGTTTCCAGGTTCAATTGGAGCCCACGACTT
CATGGGCGTTGCTAAATGGACATATATCCAGGCCATCAAAATATACTGGC
ATGTTCCAAGCAACGAAGGATATATTTAGAGAGGAAGGTTTATGGGGTTT
CTGGCGTGGCAATGTGCCAGCCTTACTTATGGTTATGCCATACAGTGCCA
TACAATTTACAGTGTTACACAAATTGAAAACATTCGCTGCTGGTTCTTCC
AAGGCAGAAAATCATATTAATTTAAGCGCTTACTTGTCTTATGTCAGTGG
GGCATTAGCTGGGTGTGCAGCTACTGTTGGATCATATCCATTTGATCTTT
TACGAACCATATTAGCGTCACAAGGAGAACCTAAGGTGTATCCCACAATG
AGGTCTGCATTTGTTGATATTGTCAGCACCCGAGGCTTTAGAGGACTGTA
TGCTGGGCTGTCACCTACACTGGTTGAGATTATTCCTTATGCTGGCCTGC
AATTCGGCACATATGATACATTCAAGCGCTGGACCATGGACTGGAACCGG
ATAAGATCTTCTAATACAAGCTCAACTGGTGCAGACATAATCTTTCAGTT
TTCAGCTTTTGTC
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