FC931475

Overview
NameFC931475
Unique NameFC931475
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length713
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC931475 vs. ExPASy Swiss-Prot
Match: ADT1_BOVIN (ADP/ATP translocase 1 OS=Bos taurus GN=SLC25A4 PE=1 SV=3)

HSP 1 Score: 77.411 bits (189), Expect = 8.331e-14
Identity = 53/187 (28.34%), Postives = 80/187 (42.78%), Query Frame = 3
Query:   84 RTVTSPLDVIKIRFQVQLEPTTSWALLNGHISRPSKYTGMFQATKDIFREEGLWGFWRGNVPALLMVMPYSAIQFTVLHKLKTFAAGSSKAENHINLSAYL--SYVSGALAGCAATVGSYPFDLLRTILASQ----GEPKVYPTMRSAFVDIVSTRGFRGLYAGLSPTLVEIIPYAGLQFGTYDTFK 626
            +T  +P++ +K+  QVQ          +  IS   +Y G+      I +E+G   FWRGN+  ++   P  A+ F    K K    G    + H     Y   +  SG  AG  +    YP D  RT LA+        + +  + +    I  + G RGLY G + ++  II Y    FG YDT K
Sbjct:   23 KTAVAPIERVKLLLQVQHA--------SKQISAEKQYKGIIDCVVRIPKEQGFLSFWRGNLANVIRYFPTQALNFAFKDKYKQIFLGG--VDRHKQFWRYFAGNLASGGAAGATSLCFVYPLDFARTRLAADVGKGAAQREFTGLGNCITKIFKSDGLRGLYQGFNVSVQGIIIYRAAYFGVYDTAK 199          
BLAST of FC931475 vs. ExPASy Swiss-Prot
Match: ADT2_RAT (ADP/ATP translocase 2 OS=Rattus norvegicus GN=Slc25a5 PE=1 SV=3)

HSP 1 Score: 77.0258 bits (188), Expect = 1.088e-13
Identity = 51/185 (27.57%), Postives = 79/185 (42.70%), Query Frame = 3
Query:   84 RTVTSPLDVIKIRFQVQLEPTTSWALLNGHISRPSKYTGMFQATKDIFREEGLWGFWRGNVPALLMVMPYSAIQFTVLHKLKTFAAGSSKAENHINLSAYLSYVSGALAGCAATVGSYPFDLLRTILASQ----GEPKVYPTMRSAFVDIVSTRGFRGLYAGLSPTLVEIIPYAGLQFGTYDTFK 626
            +T  +P++ +K+  QVQ          +  I+   +Y G+      I +E+G+  FWRGN+  ++   P  A+ F    K K    G              +  SG  AG  +    YP D  RT LA+     G  + +  +    V I  + G +GLY G + ++  II Y    FG YDT K
Sbjct:   23 KTAVAPIERVKLLLQVQHA--------SKQITADKQYKGIIDCVVRIPKEQGVLSFWRGNLANVIRYFPTQALNFAFKDKYKQIFLGGVDKRTQFWRYFAGNLASGGAAGATSLCFVYPLDFARTRLAADVGKAGAEREFKGLGDCLVKIYKSDGIKGLYQGFNVSVQGIIIYRAAYFGIYDTAK 199          
BLAST of FC931475 vs. ExPASy Swiss-Prot
Match: ADT2_MOUSE (ADP/ATP translocase 2 OS=Mus musculus GN=Slc25a5 PE=1 SV=3)

HSP 1 Score: 77.0258 bits (188), Expect = 1.088e-13
Identity = 51/185 (27.57%), Postives = 79/185 (42.70%), Query Frame = 3
Query:   84 RTVTSPLDVIKIRFQVQLEPTTSWALLNGHISRPSKYTGMFQATKDIFREEGLWGFWRGNVPALLMVMPYSAIQFTVLHKLKTFAAGSSKAENHINLSAYLSYVSGALAGCAATVGSYPFDLLRTILASQ----GEPKVYPTMRSAFVDIVSTRGFRGLYAGLSPTLVEIIPYAGLQFGTYDTFK 626
            +T  +P++ +K+  QVQ          +  I+   +Y G+      I +E+G+  FWRGN+  ++   P  A+ F    K K    G              +  SG  AG  +    YP D  RT LA+     G  + +  +    V I  + G +GLY G + ++  II Y    FG YDT K
Sbjct:   23 KTAVAPIERVKLLLQVQHA--------SKQITADKQYKGIIDCVVRIPKEQGVLSFWRGNLANVIRYFPTQALNFAFKDKYKQIFLGGVDKRTQFWRYFAGNLASGGAAGATSLCFVYPLDFARTRLAADVGKAGAEREFKGLGDCLVKIYKSDGIKGLYQGFNVSVQGIIIYRAAYFGIYDTAK 199          
BLAST of FC931475 vs. ExPASy Swiss-Prot
Match: ADT1_YEAST (ADP,ATP carrier protein 1 OS=Saccharomyces cerevisiae GN=AAC1 PE=1 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 1.088e-13
Identity = 54/187 (28.88%), Postives = 86/187 (45.99%), Query Frame = 3
Query:   84 RTVTSPLDVIKIRFQVQLEPTTSWALLNGHISRPSKYTGMFQATKDIFREEGLWGFWRGNVPALLMVMPYSAIQFTVLHKLKTFAAGSSKAENHINLSAYLSYVSGALAGCAATVGSYPFDLLRTILASQGEPKVYPTMR--SAFVDI----VSTRGFRGLYAGLSPTLVEIIPYAGLQFGTYDTFK 626
            +T  +P++ +K+  Q Q E     +L        ++Y G+    K     EG+  FWRGN   +L   P  A+ F    K+K+  +   + + +    A  +  SG  AG  + +  Y  D  RT LA+        + R  +  +D+    + T G  GLY G  P+++ II Y GL FG YD+FK
Sbjct:   28 KTGAAPIERVKLLMQNQEEMLKQGSL-------DTRYKGILDCFKRTATHEGIVSFWRGNTANVLRYFPTQALNFAFKDKIKSLLSYDRERDGYAKWFAG-NLFSGGAAGGLSLLFVYSLDYARTRLAADARGSKSTSQRQFNGLLDVYKKTLKTDGLLGLYRGFVPSVLGIIVYRGLYFGLYDSFK 206          
BLAST of FC931475 vs. ExPASy Swiss-Prot
Match: ADT1_RAT (ADP/ATP translocase 1 OS=Rattus norvegicus GN=Slc25a4 PE=1 SV=3)

HSP 1 Score: 77.0258 bits (188), Expect = 1.088e-13
Identity = 53/187 (28.34%), Postives = 79/187 (42.25%), Query Frame = 3
Query:   84 RTVTSPLDVIKIRFQVQLEPTTSWALLNGHISRPSKYTGMFQATKDIFREEGLWGFWRGNVPALLMVMPYSAIQFTVLHKLKTFAAGSSKAENHINLSAYL--SYVSGALAGCAATVGSYPFDLLRTILASQ----GEPKVYPTMRSAFVDIVSTRGFRGLYAGLSPTLVEIIPYAGLQFGTYDTFK 626
            +T  +P++ +K+  QVQ          +  IS   +Y G+      I +E+G   FWRGN+  ++   P  A+ F    K K    G    + H     Y   +  SG  AG  +    YP D  RT LA+        + +  +      I  + G +GLY G S ++  II Y    FG YDT K
Sbjct:   23 KTAVAPIERVKLLLQVQHA--------SKQISAEKQYKGIIDCVVRIPKEQGFLSFWRGNLANVIRYFPTQALNFAFKDKYKQIFLGG--VDRHKQFWRYFAGNLASGGAAGATSLCFVYPLDFARTRLAADVGKGSSQREFNGLGDCLTKIFKSDGLKGLYQGFSVSVQGIIIYRAAYFGVYDTAK 199          
BLAST of FC931475 vs. ExPASy Swiss-Prot
Match: ADT1_MOUSE (ADP/ATP translocase 1 OS=Mus musculus GN=Slc25a4 PE=1 SV=4)

HSP 1 Score: 77.0258 bits (188), Expect = 1.088e-13
Identity = 53/187 (28.34%), Postives = 79/187 (42.25%), Query Frame = 3
Query:   84 RTVTSPLDVIKIRFQVQLEPTTSWALLNGHISRPSKYTGMFQATKDIFREEGLWGFWRGNVPALLMVMPYSAIQFTVLHKLKTFAAGSSKAENHINLSAYL--SYVSGALAGCAATVGSYPFDLLRTILASQ----GEPKVYPTMRSAFVDIVSTRGFRGLYAGLSPTLVEIIPYAGLQFGTYDTFK 626
            +T  +P++ +K+  QVQ          +  IS   +Y G+      I +E+G   FWRGN+  ++   P  A+ F    K K    G    + H     Y   +  SG  AG  +    YP D  RT LA+        + +  +      I  + G +GLY G S ++  II Y    FG YDT K
Sbjct:   23 KTAVAPIERVKLLLQVQHA--------SKQISAEKQYKGIIDCVVRIPKEQGFLSFWRGNLANVIRYFPTQALNFAFKDKYKQIFLGG--VDRHKQFWRYFAGNLASGGAAGATSLCFVYPLDFARTRLAADVGKGSSQREFNGLGDCLTKIFKSDGLKGLYQGFSVSVQGIIIYRAAYFGVYDTAK 199          
BLAST of FC931475 vs. ExPASy Swiss-Prot
Match: S2541_MOUSE (Solute carrier family 25 member 41 OS=Mus musculus GN=Slc25a41 PE=2 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 1.421e-13
Identity = 46/183 (25.14%), Postives = 88/183 (48.09%), Query Frame = 3
Query:   84 RTVTSPLDVIKIRFQVQLEPTTSWALLNGHISRPSKYTGMFQATKDIFREEGLWGFWRGNVPALLMVMPYSAIQFTVLHKLKTFAAGSSKAENHINLSAYLSYVSGALAGCAATVGSYPFDLLRTILASQGEPK-VYPTMRSAFVDIVSTRGFRGLYAGLSPTLVEIIPYAGLQFGTYDTFKR 629
            +T+ +P++V+K R  ++                  +Y G+    + I   +G    +RG +P +L ++PY+     V   L+          +  + S  +S  S  L+     + SYP  L+RT + +Q   +   PTM+  F  I+S +G+ GLY G++PTL++++P  G+ +  Y+  K+
Sbjct:  138 QTLINPMEVLKTRLTLRFT---------------GQYKGLLDCARQILERDGTRALYRGYLPNMLGIIPYACTDLAVYELLQCL--WQKLGRDMKDPSGLVSLSSVTLSTTCGQMASYPLTLVRTRMQAQDTVEGSNPTMQGVFKRILSQQGWPGLYRGMTPTLLKVLPAGGISYLVYEAMKK 303          
BLAST of FC931475 vs. ExPASy Swiss-Prot
Match: ADT2_HUMAN (ADP/ATP translocase 2 OS=Homo sapiens GN=SLC25A5 PE=1 SV=6)

HSP 1 Score: 76.6406 bits (187), Expect = 1.421e-13
Identity = 51/185 (27.57%), Postives = 79/185 (42.70%), Query Frame = 3
Query:   84 RTVTSPLDVIKIRFQVQLEPTTSWALLNGHISRPSKYTGMFQATKDIFREEGLWGFWRGNVPALLMVMPYSAIQFTVLHKLKTFAAGSSKAENHINLSAYLSYVSGALAGCAATVGSYPFDLLRTILASQ----GEPKVYPTMRSAFVDIVSTRGFRGLYAGLSPTLVEIIPYAGLQFGTYDTFK 626
            +T  +P++ +K+  QVQ          +  I+   +Y G+      I +E+G+  FWRGN+  ++   P  A+ F    K K    G              +  SG  AG  +    YP D  RT LA+     G  + +  +    V I  + G +GLY G + ++  II Y    FG YDT K
Sbjct:   23 KTAVAPIERVKLLLQVQHA--------SKQITADKQYKGIIDCVVRIPKEQGVLSFWRGNLANVIRYFPTQALNFAFKDKYKQIFLGGVDKRTQFWRYFAGNLASGGAAGATSLCFVYPLDFARTRLAADVGKAGAEREFRGLGDCLVKIYKSDGIKGLYQGFNVSVQGIIIYRAAYFGIYDTAK 199          
BLAST of FC931475 vs. ExPASy Swiss-Prot
Match: YBT5_SCHPO (Uncharacterized mitochondrial carrier C12D12.05c OS=Schizosaccharomyces pombe GN=SPBC12D12.05c PE=2 SV=2)

HSP 1 Score: 76.2554 bits (186), Expect = 1.856e-13
Identity = 43/147 (29.25%), Postives = 71/147 (48.30%), Query Frame = 3
Query:  216 KDIFREEGLWGFWRGNVPALLMVMPYSAIQFTVLHKLKTFAAGSSKAENHIN-----LSAYLSYVSGALAGCAATVGSYPFDLLRTILASQG---EPKVYPTMRSAFVDIVSTRGFRGLYAGLSPTLVEIIPYAGLQFGTYDTFKRW 632
            K++++  G+ G++RG +  +L + PYSA        LK    G   + ++++     L   L    GAL+G       +P +++RT L +QG    P  Y      F       GFRGLY GLSP L+++ P   + +  Y+  K+W
Sbjct:  276 KELYKSVGIRGYYRGVLVGILGMFPYSATDLGTFEGLKRTWIGILASRDNVDPQDVKLPNGLVMAFGALSGSTGATIVFPLNVIRTRLQTQGTSAHPATYDGFIDCFYKTTKNEGFRGLYKGLSPNLLKVAPSVAISYLVYENCKKW 422          

HSP 2 Score: 73.9442 bits (180), Expect = 9.211e-13
Identity = 59/209 (28.23%), Postives = 99/209 (47.37%), Query Frame = 3
Query:   84 RTVTSPLDVIKIRFQVQLEPTTSWALLNGHISRPSK---YTGMFQATKDIFREEGLWGFWRGNVPALLMVMPYSAIQFTVLHKLKTFAAGSSKAENHINLSAYLSYVSGALAGCAATVGSYPFDLLRTIL----ASQGEPKVYPTMRSAFVDIVSTRGFRGLYAGLSPTLVEIIPYAGLQFGTYDTFKRWTMDWNRIRSSNTSSTGADI 689
            RT T+PLD +K+             L++   S+PS    +  +   TK ++   G+  F+ GN   +L VMP S+I+F     +K     SS +ENH   S   SY++G +AG  A +  YP D L+  +     S+G+      + +A  ++  + G RG Y G+   ++ + PY+    GT++  KR    W  I +S  +    D+
Sbjct:  142 RTCTAPLDRLKVM------------LISDTGSKPSPKYPFATLLHTTKVLWNRNGIRSFFVGNGINVLKVMPESSIKFGTYEAMKRVLGISSSSENH---SPLYSYLAGGMAGSVAQMFIYPVDTLKFRIQCSDLSRGQHGKSIILSNA-KELYKSVGIRGYYRGVLVGILGMFPYSATDLGTFEGLKR---TWIGILASRDNVDPQDV 331          
BLAST of FC931475 vs. ExPASy Swiss-Prot
Match: S2540_DANRE (Solute carrier family 25 member 40 OS=Danio rerio GN=slc25a40 PE=2 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 2.424e-13
Identity = 57/199 (28.64%), Postives = 88/199 (44.22%), Query Frame = 3
Query:   90 VTSPLDVIKIRFQVQLEPTTS---WALLNG---HI------------SRPSKYTGMFQATKDIFREEGLWGFWRGNVPALLMVMPYSAIQFTVLHKLKTFAAGSSKAENHINLSAYLSYVSGALAGCAATVGSYPFDLLRTILASQGEPKVYPTMRSAFVDIVSTRGFRGLYAGLSPTLVEIIPYAGLQFGTYDTFKRW 632
            + +PLDV+KIR Q Q  P      +   NG   HI              P  ++G   A   I R EG+   W G  P L+M +P + I FT   +L  FA    K  +  +L+      +GA+A   +     P +L+RT +  Q E + Y  M +     +   G R L+ G  PTL+  +P++ + +  Y+  K W
Sbjct:   33 LVTPLDVVKIRLQAQKNPFPKGKCFVYCNGLMDHICVCENGNTKVWYKAPGHFSGTLDAFLKIIRMEGIRSLWSGLPPTLIMAVPATVIYFTCYDQL--FALLKLKMGDRSDLAPLF---AGAIARVGSATVISPLELIRTKM--QSEKQSYREMSAVIRSALKNEGLRSLWRGWGPTLLRDVPFSAMYWFNYEKGKWW 224          

HSP 2 Score: 69.3218 bits (168), Expect = 2.269e-11
Identity = 53/207 (25.60%), Postives = 91/207 (43.96%), Query Frame = 3
Query:   87 TVTSPLDVIKIRFQVQLEPTTSWALLNGHISRPSKYTGMFQATKDIFREEGLWGFWRGNVPALLMVMPYSAIQFTVLHKLKTFAAGSSKAENHINLSAYLSYVSGALAGCAATVGSYPFDLLRTILASQGEPKVYPTMR----------SAFVDIVSTRGFRGLYAGLSPTLVEIIPYAGLQFGTYDTFKRWTMDWNRIRSSNTSST 677
            TV SPL++I+ + Q                S    Y  M    +   + EGL   WRG  P LL  +P+SA+ +    K K +     K  +    +  +++ +GAL+G  A++ + PFD+++T    Q E     TM+          S    IV+  G  GL+AG  P L+++ P   +   TY+  K +   +N  +    +++
Sbjct:  158 TVISPLELIRTKMQ----------------SEKQSYREMSAVIRSALKNEGLRSLWRGWGPTLLRDVPFSAMYWFNYEKGKWWLC---KRYSCSEPTVAITFTAGALSGSIASIITLPFDVVKT--KRQVEMGELQTMKLSTQVSSSTCSVMKRIVAENGVSGLFAGFMPRLIKVAPACAIMISTYEFGKAFFRKYNHQKEGQATAS 343          
The following BLAST results are available for this feature:
BLAST of FC931475 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 143
Match NameE-valueIdentityDescription
ADT1_BOVIN8.331e-1428.34ADP/ATP translocase 1 OS=Bos taurus GN=SLC25A4 PE=... [more]
ADT2_RAT1.088e-1327.57ADP/ATP translocase 2 OS=Rattus norvegicus GN=Slc2... [more]
ADT2_MOUSE1.088e-1327.57ADP/ATP translocase 2 OS=Mus musculus GN=Slc25a5 P... [more]
ADT1_YEAST1.088e-1328.88ADP,ATP carrier protein 1 OS=Saccharomyces cerevis... [more]
ADT1_RAT1.088e-1328.34ADP/ATP translocase 1 OS=Rattus norvegicus GN=Slc2... [more]
ADT1_MOUSE1.088e-1328.34ADP/ATP translocase 1 OS=Mus musculus GN=Slc25a4 P... [more]
S2541_MOUSE1.421e-1325.14Solute carrier family 25 member 41 OS=Mus musculus... [more]
ADT2_HUMAN1.421e-1327.57ADP/ATP translocase 2 OS=Homo sapiens GN=SLC25A5 P... [more]
YBT5_SCHPO1.856e-1329.25Uncharacterized mitochondrial carrier C12D12.05c O... [more]
S2540_DANRE2.424e-1328.64Solute carrier family 25 member 40 OS=Danio rerio ... [more]

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Properties
Property NameValue
Genbank descriptionC34105E06EF PostHarvP1 Citrus clementina cDNA clone C34105E06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931475 ID=FC931475; Name=FC931475; organism=Citrus clementina; type=EST; length=713bp
GGTTGATGGAGGAGCAGGAGCCGGGGCAATGGAAACGAATGGTGATCGAT
GCGTCTGCAGGCGCGATTGCCGGTGGAATCTCACGTACTGTAACTTCGCC
TCTTGATGTTATTAAGATCCGTTTCCAGGTTCAATTGGAGCCCACGACTT
CATGGGCGTTGCTAAATGGACATATATCCAGGCCATCAAAATATACTGGC
ATGTTCCAAGCAACGAAGGATATATTTAGAGAGGAAGGTTTATGGGGTTT
CTGGCGTGGCAATGTGCCAGCCTTACTTATGGTTATGCCATACAGTGCCA
TACAATTTACAGTGTTACACAAATTGAAAACATTCGCTGCTGGTTCTTCC
AAGGCAGAAAATCATATTAATTTAAGCGCTTACTTGTCTTATGTCAGTGG
GGCATTAGCTGGGTGTGCAGCTACTGTTGGATCATATCCATTTGATCTTT
TACGAACCATATTAGCGTCACAAGGAGAACCTAAGGTGTATCCCACAATG
AGGTCTGCATTTGTTGATATTGTCAGCACCCGAGGCTTTAGAGGACTGTA
TGCTGGGCTGTCACCTACACTGGTTGAGATTATTCCTTATGCTGGCCTGC
AATTCGGCACATATGATACATTCAAGCGCTGGACCATGGACTGGAACCGG
ATAAGATCTTCTAATACAAGCTCAACTGGTGCAGACATAATCTTTCAGTT
TTCAGCTTTTGTC
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