FC931478
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC931478 vs. ExPASy Swiss-Prot
Match: ERF1_MOUSE (Eukaryotic peptide chain release factor subunit 1 OS=Mus musculus GN=Etf1 PE=1 SV=4) HSP 1 Score: 259.996 bits (663), Expect = 4.641e-72 Identity = 128/175 (73.14%), Postives = 141/175 (80.57%), Query Frame = 2 Query: 137 DGQETDKNXXXXXXXXXXXXXXXXRGNGTSMISLIMPPRDQVSRVTKMLGDEFGTASNIKSRVNRQSVLGAITSAQQRLKLYNKVPPNGLVLYTGTIVTDDGKEKKVTIDFEPFRPINASLYLCDNKFHTDALNELLESDDKFGFIVMDGNGTLFGTLSGNTREVLHKFSVDLPR 661 D D+N RGNGTSMISLI+PP+DQ+SRV KML DEFGTASNIKSRVNR SVLGAITS QQRLKLYNKVPPNGLV+Y GTIVT++GKEKKV IDFEPF+PIN SLYLCDNKFHT+AL LL D KFGFIV+DG+G LFGTL GNTREVLHKF+VDLP+ Sbjct: 4 DPSAADRNVEIWKIKKLIKSLEAARGNGTSMISLIIPPKDQISRVAKMLADEFGTASNIKSRVNRLSVLGAITSVQQRLKLYNKVPPNGLVVYCGTIVTEEGKEKKVNIDFEPFKPINTSLYLCDNKFHTEALTALLSDDSKFGFIVIDGSGALFGTLQGNTREVLHKFTVDLPK 178 HSP 2 Score: 32.7278 bits (73), Expect = 4.641e-72 Identity = 14/14 (100.00%), Postives = 14/14 (100.00%), Query Frame = 1 Query: 658 KKHGRGGQSALRFA 699 KKHGRGGQSALRFA Sbjct: 178 KKHGRGGQSALRFA 191
BLAST of FC931478 vs. ExPASy Swiss-Prot
Match: ERF1_MESAU (Eukaryotic peptide chain release factor subunit 1 OS=Mesocricetus auratus GN=ETF1 PE=1 SV=3) HSP 1 Score: 259.996 bits (663), Expect = 4.641e-72 Identity = 128/175 (73.14%), Postives = 141/175 (80.57%), Query Frame = 2 Query: 137 DGQETDKNXXXXXXXXXXXXXXXXRGNGTSMISLIMPPRDQVSRVTKMLGDEFGTASNIKSRVNRQSVLGAITSAQQRLKLYNKVPPNGLVLYTGTIVTDDGKEKKVTIDFEPFRPINASLYLCDNKFHTDALNELLESDDKFGFIVMDGNGTLFGTLSGNTREVLHKFSVDLPR 661 D D+N RGNGTSMISLI+PP+DQ+SRV KML DEFGTASNIKSRVNR SVLGAITS QQRLKLYNKVPPNGLV+Y GTIVT++GKEKKV IDFEPF+PIN SLYLCDNKFHT+AL LL D KFGFIV+DG+G LFGTL GNTREVLHKF+VDLP+ Sbjct: 4 DPSAADRNVEIWKIKKLIKSLEAARGNGTSMISLIIPPKDQISRVAKMLADEFGTASNIKSRVNRLSVLGAITSVQQRLKLYNKVPPNGLVVYCGTIVTEEGKEKKVNIDFEPFKPINTSLYLCDNKFHTEALTALLSDDSKFGFIVIDGSGALFGTLQGNTREVLHKFTVDLPK 178 HSP 2 Score: 32.7278 bits (73), Expect = 4.641e-72 Identity = 14/14 (100.00%), Postives = 14/14 (100.00%), Query Frame = 1 Query: 658 KKHGRGGQSALRFA 699 KKHGRGGQSALRFA Sbjct: 178 KKHGRGGQSALRFA 191
BLAST of FC931478 vs. ExPASy Swiss-Prot
Match: ERF1_HUMAN (Eukaryotic peptide chain release factor subunit 1 OS=Homo sapiens GN=ETF1 PE=1 SV=3) HSP 1 Score: 259.996 bits (663), Expect = 4.641e-72 Identity = 128/175 (73.14%), Postives = 141/175 (80.57%), Query Frame = 2 Query: 137 DGQETDKNXXXXXXXXXXXXXXXXRGNGTSMISLIMPPRDQVSRVTKMLGDEFGTASNIKSRVNRQSVLGAITSAQQRLKLYNKVPPNGLVLYTGTIVTDDGKEKKVTIDFEPFRPINASLYLCDNKFHTDALNELLESDDKFGFIVMDGNGTLFGTLSGNTREVLHKFSVDLPR 661 D D+N RGNGTSMISLI+PP+DQ+SRV KML DEFGTASNIKSRVNR SVLGAITS QQRLKLYNKVPPNGLV+Y GTIVT++GKEKKV IDFEPF+PIN SLYLCDNKFHT+AL LL D KFGFIV+DG+G LFGTL GNTREVLHKF+VDLP+ Sbjct: 4 DPSAADRNVEIWKIKKLIKSLEAARGNGTSMISLIIPPKDQISRVAKMLADEFGTASNIKSRVNRLSVLGAITSVQQRLKLYNKVPPNGLVVYCGTIVTEEGKEKKVNIDFEPFKPINTSLYLCDNKFHTEALTALLSDDSKFGFIVIDGSGALFGTLQGNTREVLHKFTVDLPK 178 HSP 2 Score: 32.7278 bits (73), Expect = 4.641e-72 Identity = 14/14 (100.00%), Postives = 14/14 (100.00%), Query Frame = 1 Query: 658 KKHGRGGQSALRFA 699 KKHGRGGQSALRFA Sbjct: 178 KKHGRGGQSALRFA 191
BLAST of FC931478 vs. ExPASy Swiss-Prot
Match: ERF1_BOVIN (Eukaryotic peptide chain release factor subunit 1 OS=Bos taurus GN=ETF1 PE=2 SV=3) HSP 1 Score: 259.996 bits (663), Expect = 4.641e-72 Identity = 128/175 (73.14%), Postives = 141/175 (80.57%), Query Frame = 2 Query: 137 DGQETDKNXXXXXXXXXXXXXXXXRGNGTSMISLIMPPRDQVSRVTKMLGDEFGTASNIKSRVNRQSVLGAITSAQQRLKLYNKVPPNGLVLYTGTIVTDDGKEKKVTIDFEPFRPINASLYLCDNKFHTDALNELLESDDKFGFIVMDGNGTLFGTLSGNTREVLHKFSVDLPR 661 D D+N RGNGTSMISLI+PP+DQ+SRV KML DEFGTASNIKSRVNR SVLGAITS QQRLKLYNKVPPNGLV+Y GTIVT++GKEKKV IDFEPF+PIN SLYLCDNKFHT+AL LL D KFGFIV+DG+G LFGTL GNTREVLHKF+VDLP+ Sbjct: 4 DPSAADRNVEIWKIKKLIKSLEAARGNGTSMISLIIPPKDQISRVAKMLADEFGTASNIKSRVNRLSVLGAITSVQQRLKLYNKVPPNGLVVYCGTIVTEEGKEKKVNIDFEPFKPINTSLYLCDNKFHTEALTALLSDDSKFGFIVIDGSGALFGTLQGNTREVLHKFTVDLPK 178 HSP 2 Score: 32.7278 bits (73), Expect = 4.641e-72 Identity = 14/14 (100.00%), Postives = 14/14 (100.00%), Query Frame = 1 Query: 658 KKHGRGGQSALRFA 699 KKHGRGGQSALRFA Sbjct: 178 KKHGRGGQSALRFA 191
BLAST of FC931478 vs. ExPASy Swiss-Prot
Match: ERF1_PODAN (Eukaryotic peptide chain release factor subunit 1 OS=Podospora anserina GN=SU2 PE=3 SV=1) HSP 1 Score: 259.996 bits (663), Expect = 4.642e-72 Identity = 126/175 (72.00%), Postives = 143/175 (81.71%), Query Frame = 2 Query: 137 DGQETDKNXXXXXXXXXXXXXXXXRGNGTSMISLIMPPRDQVSRVTKMLGDEFGTASNIKSRVNRQSVLGAITSAQQRLKLYNKVPPNGLVLYTGTIVTDDGKEKKVTIDFEPFRPINASLYLCDNKFHTDALNELLESDDKFGFIVMDGNGTLFGTLSGNTREVLHKFSVDLPR 661 + E +KN RGNGTSMISLI+PP+DQ+SR KML +E+GTASNIKSRVNRQSVL AITS QQRLKLYNKVPPNGLV+Y G I+T +GKE+KV IDFEPF+PIN SLYLCDNKFHT+AL ELLESD KFGFIVMDGNG LFGTLSGNTR+++HKFSVDLP+ Sbjct: 5 NANEAEKNIEIWKVKKLIKRLEAARGNGTSMISLIIPPKDQISRAAKMLAEEYGTASNIKSRVNRQSVLSAITSTQQRLKLYNKVPPNGLVVYCGEILTSEGKERKVNIDFEPFKPINTSLYLCDNKFHTEALAELLESDQKFGFIVMDGNGALFGTLSGNTRDIVHKFSVDLPK 179 HSP 2 Score: 32.7278 bits (73), Expect = 4.642e-72 Identity = 14/14 (100.00%), Postives = 14/14 (100.00%), Query Frame = 1 Query: 658 KKHGRGGQSALRFA 699 KKHGRGGQSALRFA Sbjct: 179 KKHGRGGQSALRFA 192
BLAST of FC931478 vs. ExPASy Swiss-Prot
Match: ERF1_CAEEL (Eukaryotic peptide chain release factor subunit 1 OS=Caenorhabditis elegans GN=erf-1 PE=2 SV=1) HSP 1 Score: 251.136 bits (640), Expect = 4.622e-69 Identity = 120/151 (79.47%), Postives = 136/151 (90.07%), Query Frame = 2 Query: 209 RGNGTSMISLIMPPRDQVSRVTKMLGDEFGTASNIKSRVNRQSVLGAITSAQQRLKLYNKVPPNGLVLYTGTIVTDDGKEKKVTIDFEPFRPINASLYLCDNKFHTDALNELLESDDKFGFIVMDGNGTLFGTLSGNTREVLHKFSVDLPR 661 RGNGTSMISLI+PP+DQV+R+ +ML +E+GTASNIKSRVNR SVLGAITS Q RLKLYNKVPPNGLV+Y GTI+TD+GKEKKV IDFEPF+ IN SLYLCDNKFHT+AL LL D+KFGFI+MDGNG LFGTL GNTREVLHKF+VDLP+ Sbjct: 36 RGNGTSMISLIIPPKDQVARIQRMLAEEYGTASNIKSRVNRLSVLGAITSVQGRLKLYNKVPPNGLVVYCGTIMTDEGKEKKVNIDFEPFKAINTSLYLCDNKFHTEALQGLLADDNKFGFIIMDGNGCLFGTLQGNTREVLHKFTVDLPK 186 HSP 2 Score: 31.5722 bits (70), Expect = 4.622e-69 Identity = 13/14 (92.86%), Postives = 14/14 (100.00%), Query Frame = 1 Query: 658 KKHGRGGQSALRFA 699 KKHGRGGQSA+RFA Sbjct: 186 KKHGRGGQSAVRFA 199
BLAST of FC931478 vs. ExPASy Swiss-Prot
Match: ERF1_CRYHO (Eukaryotic peptide chain release factor subunit 1 OS=Cryptosporidium hominis GN=erf1 PE=3 SV=1) HSP 1 Score: 241.121 bits (614), Expect = 2.074e-66 Identity = 111/151 (73.51%), Postives = 135/151 (89.40%), Query Frame = 2 Query: 209 RGNGTSMISLIMPPRDQVSRVTKMLGDEFGTASNIKSRVNRQSVLGAITSAQQRLKLYNKVPPNGLVLYTGTIVTDDGKEKKVTIDFEPFRPINASLYLCDNKFHTDALNELLESDDKFGFIVMDGNGTLFGTLSGNTREVLHKFSVDLPR 661 RGNGTSMISL++ P+D++SR++KML DE+GTASNIKSRVNR SVL AITS QQRLKLYN+ P NGLV+Y GT++T+DGKEKKV IDFEPF+PIN SLYLCDNKFH DAL ELLE+DDKFGFI++DGNG L+G + G++REVL +F+VDLP+ Sbjct: 24 RGNGTSMISLVIKPKDEISRISKMLADEYGTASNIKSRVNRLSVLSAITSTQQRLKLYNRTPQNGLVVYCGTLITEDGKEKKVNIDFEPFKPINTSLYLCDNKFHVDALKELLETDDKFGFIIVDGNGALYGVVQGSSREVLLRFNVDLPK 174 HSP 2 Score: 32.7278 bits (73), Expect = 2.074e-66 Identity = 14/14 (100.00%), Postives = 14/14 (100.00%), Query Frame = 1 Query: 658 KKHGRGGQSALRFA 699 KKHGRGGQSALRFA Sbjct: 174 KKHGRGGQSALRFA 187
BLAST of FC931478 vs. ExPASy Swiss-Prot
Match: ERF1_DICDI (Eukaryotic peptide chain release factor subunit 1 OS=Dictyostelium discoideum GN=erf1 PE=2 SV=2) HSP 1 Score: 238.81 bits (608), Expect = 1.019e-65 Identity = 120/175 (68.57%), Postives = 135/175 (77.14%), Query Frame = 2 Query: 137 DGQETDKNXXXXXXXXXXXXXXXXRGNGTSMISLIMPPRDQVSRVTKMLGDEFGTASNIKSRVNRQSVLGAITSAQQRLKLYNKVPPNGLVLYTGTIVTDDGKEKKVTIDFEPFRPINASLYLCDNKFHTDALNELLESDDKFGFIVMDGNGTLFGTLSGNTREVLHKFSVDLPR 661 D Q DK RGNGTSMISLI+ P DQ+++V KML +E+GTASNIKSRVNR SVLGAITSAQQRLKLY KVP NGLV+Y GT+VTD+GKEK V ID EPF+PIN SLYLCDNKFHT L ELLESD+KFGFIV+DGNG LFG L G+TR VLHK +VDLP+ Sbjct: 6 DQQNADKQVEQWKIKKLIKNLEAARGNGTSMISLIIRPGDQIAKVNKMLAEEYGTASNIKSRVNRLSVLGAITSAQQRLKLYTKVPDNGLVIYCGTMVTDEGKEKPVRIDIEPFKPINTSLYLCDNKFHTAPLGELLESDEKFGFIVVDGNGALFGLLCGSTRTVLHKITVDLPK 180 HSP 2 Score: 32.7278 bits (73), Expect = 1.019e-65 Identity = 14/14 (100.00%), Postives = 14/14 (100.00%), Query Frame = 1 Query: 658 KKHGRGGQSALRFA 699 KKHGRGGQSALRFA Sbjct: 180 KKHGRGGQSALRFA 193
BLAST of FC931478 vs. ExPASy Swiss-Prot
Match: ERF1_YEAST (Eukaryotic peptide chain release factor subunit 1 OS=Saccharomyces cerevisiae GN=SUP1 PE=1 SV=1) HSP 1 Score: 236.884 bits (603), Expect = 3.844e-65 Identity = 115/172 (66.86%), Postives = 135/172 (78.49%), Query Frame = 2 Query: 146 ETDKNXXXXXXXXXXXXXXXXRGNGTSMISLIMPPRDQVSRVTKMLGDEFGTASNIKSRVNRQSVLGAITSAQQRLKLYNKVPPNGLVLYTGTIVTDDGKEKKVTIDFEPFRPINASLYLCDNKFHTDALNELLESDDKFGFIVMDGNGTLFGTLSGNTREVLHKFSVDLPR 661 E +KN RGNGTSMISL++PP+ + KML DE+GTASNIKSRVNR SVL AITS QQ+LKLYN +P NGLVLY G I+T+DGKEKKVT D EP++PIN SLYLCDNKFHT+ L+ELL++DDKFGFIVMDG GTLFG++SGNTR VLHKF+VDLP+ Sbjct: 4 EVEKNIEIWKVKKLVQSLEKARGNGTSMISLVIPPKGLIPLYQKMLTDEYGTASNIKSRVNRLSVLSAITSTQQKLKLYNTLPKNGLVLYCGDIITEDGKEKKVTFDIEPYKPINTSLYLCDNKFHTEVLSELLQADDKFGFIVMDGQGTLFGSVSGNTRTVLHKFTVDLPK 175 HSP 2 Score: 32.7278 bits (73), Expect = 3.844e-65 Identity = 14/14 (100.00%), Postives = 14/14 (100.00%), Query Frame = 1 Query: 658 KKHGRGGQSALRFA 699 KKHGRGGQSALRFA Sbjct: 175 KKHGRGGQSALRFA 188
BLAST of FC931478 vs. ExPASy Swiss-Prot
Match: ERF1_SCHPO (Eukaryotic peptide chain release factor subunit 1 OS=Schizosaccharomyces pombe GN=sup45 PE=1 SV=1) HSP 1 Score: 217.238 bits (552), Expect = 2.898e-59 Identity = 102/150 (68.00%), Postives = 127/150 (84.67%), Query Frame = 2 Query: 212 GNGTSMISLIMPPRDQVSRVTKMLGDEFGTASNIKSRVNRQSVLGAITSAQQRLKLYNKVPPNGLVLYTGTIVTDDGKEKKVTIDFEPFRPINASLYLCDNKFHTDALNELLESDDKFGFIVMDGNGTLFGTLSGNTREVLHKFSVDLPR 661 GNGTSMI+LI+PP +Q+SR + ML +E+GTASNIKSRVNR SVL AITS ++RLKLYNKVP NGLV+Y G ++ + K +K+ IDFEPF+PIN S YLCDNKFHT+AL ELLESD +FGFIVMDG+ TL+G +SG+ REVL +F+VDLP+ Sbjct: 26 GNGTSMITLIIPPGEQISRYSNMLAEEYGTASNIKSRVNRLSVLSAITSTRERLKLYNKVPDNGLVIYCGEVIMEGNKTRKLNIDFEPFKPINTSQYLCDNKFHTEALAELLESDQRFGFIVMDGHQTLYGVVSGSAREVLQRFTVDLPK 175 HSP 2 Score: 32.7278 bits (73), Expect = 2.898e-59 Identity = 14/14 (100.00%), Postives = 14/14 (100.00%), Query Frame = 1 Query: 658 KKHGRGGQSALRFA 699 KKHGRGGQSALRFA Sbjct: 175 KKHGRGGQSALRFA 188 The following BLAST results are available for this feature:
BLAST of FC931478 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 63
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Sequences
The
following sequences are available for this feature:
EST sequence >FC931478 ID=FC931478; Name=FC931478; organism=Citrus clementina; type=EST; length=700bpback to top |