FC931482

Overview
NameFC931482
Unique NameFC931482
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length718
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC931482 vs. ExPASy Swiss-Prot
Match: PER70_MAIZE (Peroxidase 70 OS=Zea mays GN=PER70 PE=1 SV=1)

HSP 1 Score: 211.846 bits (538), Expect = 2.876e-54
Identity = 118/225 (52.44%), Postives = 141/225 (62.67%), Query Frame = 2
Query:    2 SLIRLHFHDCFVNGCDASVLLDNTTTIDSEKFAAPNNNSARGFEVIDQMKAAVEKACPRVVSCADILTIAAEQSVALSGGPSWTNLLGRRDSRTANRTLANQNLPSPFDTLDRLKASFRNVGLNDNFDLVALSGAHTFGRAQCRFFSVRLFNFNNTGNPDPTLDATFLQQLRQLCP-QGGNG-SVLTNLDVTTPNVFDNKYFSNLRNRKGLLQSDQELFSTPGAD 670
            SL+RLHFHDCFV GCD SVLL++T T   E+ A PN  S RGF V+D +KA VE  CP VVSCADIL +AA  SV   GGPSW  LLGRRDS TA+  LAN +LP+P   L  L A+F    L+   DLVALSGAHT G AQC+ F   ++N       D  ++A F    R  CP   GNG   L  LD  TP  FDN Y++NL  ++GLL SDQ+LF+    D
Sbjct:   60 SLLRLHFHDCFVQGCDGSVLLNDTATFTGEQTANPNVGSIRGFGVVDNIKAQVEAVCPGVVSCADILAVAARDSVVALGGPSWRVLLGRRDSTTASLALANSDLPAPSLDLANLTAAFAKKRLS-RTDLVALSGAHTIGLAQCKNFRAHIYN-------DTNVNAAFATLRRANCPAAAGNGDGNLAPLDTATPTAFDNAYYTNLLAQRGLLHSDQQLFNGGATD 276          
BLAST of FC931482 vs. ExPASy Swiss-Prot
Match: PER25_ARATH (Peroxidase 25 OS=Arabidopsis thaliana GN=PER25 PE=2 SV=2)

HSP 1 Score: 211.075 bits (536), Expect = 4.906e-54
Identity = 113/217 (52.07%), Postives = 141/217 (64.98%), Query Frame = 2
Query:    5 LIRLHFHDCFVNGCDASVLLDNTTTIDSEKFAAPNNNSARGFEVIDQMKAAVEKACPRVVSCADILTIAAEQSVALSGGPSWTNLLGRRDSRTANRTLANQNLPSPFDTLDRLKASFRNVGLNDNFDLVALSGAHTFGRAQCRFFSVRLFNFNNTGNPDPTLDATFLQQLRQLCPQGGNGSVLTNLDVTTPNVFDNKYFSNLRNRKGLLQSDQELFS 655
            L+RLHFHDCFV GCD SVL+   +   +E+ A PN    RG EVID  KA +E  CP VVSCADIL +AA  SV LS GPSW    GR+D R +  T A+ NLPSP D++   K  F++ GL D  DLV L GAHT G+  C FF  RL+NF  TGN DPT+  +FL QL+ LCP  G+GS    LD+ +P+ FD  +F NLR+   +L+SDQ L+S
Sbjct:   63 LLRLHFHDCFVQGCDGSVLIKGKS---AEQAALPNLG-LRGLEVIDDAKARLEAVCPGVVSCADILALAARDSVDLSDGPSWRVPTGRKDGRISLATEAS-NLPSPLDSVAVQKQKFQDKGL-DTHDLVTLLGAHTIGQTDCLFFRYRLYNFTVTGNSDPTISPSFLTQLKTLCPPNGDGSKRVALDIGSPSKFDESFFKNLRDGNAILESDQRLWS 273          
BLAST of FC931482 vs. ExPASy Swiss-Prot
Match: PER67_ARATH (Peroxidase 67 OS=Arabidopsis thaliana GN=PER67 PE=2 SV=1)

HSP 1 Score: 210.69 bits (535), Expect = 6.408e-54
Identity = 116/230 (50.43%), Postives = 147/230 (63.91%), Query Frame = 2
Query:    2 SLIRLHFHDCFVNGCDASVLLDNTTTIDSEKFAAPNNNSARGFEVIDQMKAAVEKACPRVVSCADILTIAAEQSVALSGGPSWTNLLGRRDSRTANRTLANQN-LPSPFDTLDRLKASFRNVGLNDNFDLVALSGAHTFGRAQCRFFSVRLFNFNNTGNPDPTLDATFLQQLRQLCP--QGGNGSVLTNLDVTTPNVFDNKYFSNLRNRKGLLQSDQELFSTPGADTIDI 682
            SL+RL FHDCFVNGCD S+LLD+T +   EK + P+NNS RGFEVID++K  VEK CP +VSCADIL I A  SV L GGP W+  LGRRDS TAN   AN   +P P  TL  L   F+  GL+   D+VALSGAHT GRAQC  F  R++N +N       +D +F    R+ CP   G   +   NLDV +P+ FD+ ++  L ++KGLL SDQ LF+    D++ I
Sbjct:   54 SLLRLFFHDCFVNGCDGSLLLDDTPSFLGEKTSGPSNNSVRGFEVIDKIKFKVEKMCPGIVSCADILAITARDSVLLLGGPGWSVKLGRRDSTTANFAAANSGVIPPPITTLSNLINRFKAQGLSTR-DMVALSGAHTIGRAQCVTFRNRIYNASN-------IDTSFAISKRRNCPATSGSGDNKKANLDVRSPDRFDHGFYKQLLSKKGLLTSDQVLFNNGPTDSLVI 275          
BLAST of FC931482 vs. ExPASy Swiss-Prot
Match: PER1_WHEAT (Peroxidase OS=Triticum aestivum PE=2 SV=1)

HSP 1 Score: 210.305 bits (534), Expect = 8.369e-54
Identity = 114/223 (51.12%), Postives = 140/223 (62.78%), Query Frame = 2
Query:    2 SLIRLHFHDCFVNGCDASVLLDNTTTIDSEKFAAPNNNSARGFEVIDQMKAAVEKACPRVVSCADILTIAAEQSVALSGGPSWTNLLGRRDSRTANRTLANQNLPSPFDTLDRLKASFRNVGLNDNFDLVALSGAHTFGRAQCRFFSVRLFNFNNTGNPDPTLDATFLQQLRQLCPQGGNGSVLTNLDVTTPNVFDNKYFSNLRNRKGLLQSDQELFSTPGAD 670
            SL+RLHFHDCF  GCDASVLL        E+ A PN  S RGF VID +K  +E  C + VSCADILT+AA  SV   GGPSWT  LGRRDS TA+ +LAN +LP P  +  +L+A+F    LN   D+VALSGAHT G+AQC  F  R++        D  ++  F   L+  CPQ G  + L NLD  TPN FDN Y++NL ++KGLL SDQ LF+    D
Sbjct:   58 SLLRLHFHDCF--GCDASVLLTGM-----EQNAGPNVGSLRGFGVIDNIKTQLESVCKQTVSCADILTVAARDSVVALGGPSWTVPLGRRDSTTASASLANSDLPGPSSSRSQLEAAFLKKNLN-TVDMVALSGAHTIGKAQCSNFRTRIY------GGDTNINTAFATSLKANCPQSGGNTNLANLDTMTPNAFDNAYYTNLLSQKGLLHSDQVLFNNETTD 266          
BLAST of FC931482 vs. ExPASy Swiss-Prot
Match: PER68_ARATH (Peroxidase 68 OS=Arabidopsis thaliana GN=PER68 PE=2 SV=1)

HSP 1 Score: 209.149 bits (531), Expect = 1.864e-53
Identity = 119/230 (51.74%), Postives = 145/230 (63.04%), Query Frame = 2
Query:    2 SLIRLHFHDCFVNGCDASVLLDNTTTIDSEKFAAPNNNSARGFEVIDQMKAAVEKACPRVVSCADILTIAAEQSVALSGGPSWTNLLGRRDSRTANRTLANQN-LPSPFDTLDRLKASFRNVGLNDNFDLVALSGAHTFGRAQCRFFSVRLFNFNNTGNPDPTLDATFLQQLRQLCP----QGGNGSVLTNLDVTTPNVFDNKYFSNLRNRKGLLQSDQELFSTPGADTI 676
            SL+RL FHDCFVNGCDAS+LLD+T +   EK A PNNNS RG+EVID +K+ VE+ CP VVSCADIL I A  SV L GG  W+  LGRRDS TA+ + AN   LP P  TLD L   FR  GL+   D+VALSGAHT G+A+C  F  R++N  N       +D +F    R+ CP     G N + +  LD+ TP  FD  YF  L N +GLL SDQ LF+    D+I
Sbjct:   63 SLLRLFFHDCFVNGCDASILLDDTRSFLGEKTAGPNNNSVRGYEVIDAIKSRVERLCPGVVSCADILAITARDSVLLMGGRGWSVKLGRRDSITASFSTANSGVLPPPTSTLDNLINLFRANGLSPR-DMVALSGAHTIGQARCVTFRSRIYNSTN-------IDLSFALSRRRSCPAATGSGDNNAAI--LDLRTPEKFDGSYFMQLVNHRGLLTSDQVLFNGGSTDSI 282          
BLAST of FC931482 vs. ExPASy Swiss-Prot
Match: PER2_ARAHY (Cationic peroxidase 2 OS=Arachis hypogaea GN=PNC2 PE=2 SV=1)

HSP 1 Score: 207.223 bits (526), Expect = 7.085e-53
Identity = 109/219 (49.77%), Postives = 138/219 (63.01%), Query Frame = 2
Query:    5 LIRLHFHDCFVNGCDASVLLDNTTTIDSEKFAAPNNNSARGFEVIDQMKAAVEKACPRVVSCADILTIAAEQSVALSGGPSWTNLLGRRDSRTANRTLANQNLPSPFDTLDRLKASFRNVGLNDNFDLVALSGAHTFGRAQCRFFSVRLFNFNNTGNPDPTLDATFLQQLRQLCPQGGNGSVLTNLDVTTPNVFDNKYFSNLRNRKGLLQSDQELFSTP 661
            ++R+HFHDCFV GCD S+L+    T +   FA   N   RG+E+ID  K  +E ACP VVSCADIL +AA  SV LSGG SW    GRRD R +  +  + NLP+P D++D  K  F   GLN   DLV L G HT G ++C+FFS RLFNFN T   DP +D +F+  L+ LCPQ    +    LD  +   FD  YFSNLRNR+G+LQSDQ L++ P
Sbjct:   66 ILRMHFHDCFVQGCDGSILISGPAT-EKTAFA---NLGLRGYEIIDDAKTQLEAACPGVVSCADILALAARDSVVLSGGLSWQVPTGRRDGRVSQASDVS-NLPAPSDSVDVQKQKFAAKGLNTQ-DLVTLVGGHTIGTSECQFFSNRLFNFNGTAAADPAIDPSFVSNLQALCPQNTGAANRVALDTGSQFKFDTSYFSNLRNRRGVLQSDQALWNDP 278          
BLAST of FC931482 vs. ExPASy Swiss-Prot
Match: PER11_ARATH (Peroxidase 11 OS=Arabidopsis thaliana GN=PER11 PE=1 SV=1)

HSP 1 Score: 206.453 bits (524), Expect = 1.208e-52
Identity = 112/237 (47.26%), Postives = 155/237 (65.40%), Query Frame = 2
Query:    5 LIRLHFHDCFVNGCDASVLLDNTTTIDSEKFAAPNNNSARGFEVIDQMKAAVEKACPRVVSCADILTIAAEQSVALSGGPSWTNLLGRRDSRTANRTLANQNLPSPFDTLDRLKASFRNVGLNDNFDLVALSGAHTFGRAQCRFFSVRLF-NFNNTGNPDPTLDATFLQQLRQLCP--QGGNGSVLTNLDVTTPNVFDNKYFSNLRNRKGLLQSDQELF-STPGADTIDIVNVFRKN 703
            +IRLHFHDCFV GCD SVLLD T T+  EK A+PN NS +G++++D++K  +E  CP VVSCAD+LTI A  +  L GGP W   +GR+DS+TA+  LA  NLP+P + L  + A F + GL+   D+VAL GAHT G+AQCR F  R++ +F  T   +P +  T+L  LR++CP   G   S +T +D  TPN+FDN  +  L   +GLL SDQE++ S  G  T  IV+ + ++
Sbjct:   64 IIRLHFHDCFVQGCDGSVLLDETETLQGEKKASPNINSLKGYKIVDRIKNIIESECPGVVSCADLLTIGARDATILVGGPYWDVPVGRKDSKTASYELATTNLPTPEEGLISIIAKFYSQGLSVE-DMVALIGAHTIGKAQCRNFRSRIYGDFQVTSALNP-VSETYLASLREICPASSGEGDSNVTAIDNVTPNLFDNSIYHTLLRGEGLLNSDQEMYTSLFGIQTRRIVSKYAED 298          
BLAST of FC931482 vs. ExPASy Swiss-Prot
Match: PER1_HORVU (Peroxidase 1 OS=Hordeum vulgare PE=2 SV=1)

HSP 1 Score: 204.142 bits (518), Expect = 5.998e-52
Identity = 115/226 (50.88%), Postives = 139/226 (61.50%), Query Frame = 2
Query:    2 SLIRLHFHDCFVNGCDASVLLDNTTTIDSEKFAAPNNNSARGFEVIDQMKAAVEKACPRVVSCADILTIAAEQSVALSGGPSWTNLLGRRDSRTANRTLANQNLPSPFDTLDRLKASFRNVGLNDNFDLVALSGAHTFGRAQCRFFSVRLFNFNNTGNPDPTLDATFLQQLRQLCPQ---GGNGSVLTNLDVTTPNVFDNKYFSNLRNRKGLLQSDQELFSTPGAD 670
            SL+RLHFHDCFV GCDASVLL        E+ A PN  S RGF VID +K  +E  C + VSCADILT+AA  SV   GGPSWT  LGRRDS  AN   AN +LP    +   L+A+F   G  +  D+VALSGAHT G+AQC  F  R++        D  ++A +   LR  CPQ    G+GS L NLD TT N FDN Y++NL ++KGLL SDQ LF+    D
Sbjct:   56 SLLRLHFHDCFVQGCDASVLLSGM-----EQNAIPNAGSLRGFGVIDSIKTQIEAICKQTVSCADILTVAARDSVVALGGPSWTVPLGRRDSIDANENEANTDLPGFNSSRAELEAAFLKKGGLNTVDMVALSGAHTIGQAQCSTFRARIY------GGDTNINAAYAASLRANCPQTVGSGDGS-LANLDTTTANTFDNAYYTNLMSQKGLLHSDQVLFNNDTTD 269          
BLAST of FC931482 vs. ExPASy Swiss-Prot
Match: PER17_ARATH (Peroxidase 17 OS=Arabidopsis thaliana GN=PER17 PE=2 SV=1)

HSP 1 Score: 202.601 bits (514), Expect = 1.745e-51
Identity = 103/218 (47.25%), Postives = 147/218 (67.43%), Query Frame = 2
Query:    2 SLIRLHFHDCFVNGCDASVLLDNTTTIDSEKFAAPNNNSARGFEVIDQMKAAVEKACPRVVSCADILTIAAEQSVALSGGPSWTNLLGRRDSRTANRTLANQNLPSPFDTLDRLKASFRNVGLNDNFDLVALSGAHTFGRAQCRFFSVRLFNFNNTGNPDPTLDATFLQQLRQLCPQGGNGSVLTNLDVTTPNVFDNKYFSNLRNRKGLLQSDQELFS 655
            S++R  FHDCFVNGCDAS+LLD+T  +  EK +  N +S R FEV+D +K A+EKACP  VSCADI+ +AA  +VAL+GGP W   LGR+DS TA++  ++  +PSP      L   F    L+   D+VALSG+H+ G+ +C     RL+N + +G PDP L+ ++ ++L +LCP GG+ +V  +LD  TP VFDN+YF +L + +G L SDQ L++
Sbjct:   56 SVMRFQFHDCFVNGCDASLLLDDTPNMLGEKLSLSNIDSLRSFEVVDDIKEALEKACPATVSCADIVIMAARDAVALTGGPDWEVKLGRKDSLTASQQDSDDIMPSPRANATFLIDLFERFNLSVK-DMVALSGSHSIGQGRCFSIMFRLYNQSGSGKPDPALEPSYRKKLDKLCPLGGDENVTGDLD-ATPQVFDNQYFKDLVSGRGFLNSDQTLYT 271          
BLAST of FC931482 vs. ExPASy Swiss-Prot
Match: PER66_MAIZE (Peroxidase 66 OS=Zea mays GN=PER66 PE=1 SV=1)

HSP 1 Score: 202.216 bits (513), Expect = 2.279e-51
Identity = 110/225 (48.89%), Postives = 147/225 (65.33%), Query Frame = 2
Query:    2 SLIRLHFHDCFVNGCDASVLLDNTTTIDSEKFAAPNNN-SARGFEVIDQMKAAVEKACPRVVSCADILTIAAEQSVALSGGPSWTNLLGRRDSRTANRTLANQNLPSPFDTLDRLKASFRNVGLNDNFDLVALSGAHTFGRAQCRFFSVRLFNFNNTGNPDPTLDATFLQQLRQLCPQGGNGSVLTNLDVTTPNVFDNKYFSNLRNRKGLLQSDQELFSTPGADT 673
            SL+RLHFHDCFV GCDAS+LL++T+    E+   PN   + RGF V++ +KA VE  CP +VSCADIL +AA   V   GGPSWT LLGRRDS TA+      +LP P  +L +L +++    LN   D+VALSGAHT G+AQC  F+  ++N       D  +++ F   LR  CP+ G+ + L  LD TTPN FDN Y++NL ++KGLL SDQELF++   D+
Sbjct:   64 SLLRLHFHDCFVRGCDASLLLNDTS---GEQSQGPNLTLNPRGFVVVNSIKAQVESVCPGIVSCADILAVAARDGVVALGGPSWTVLLGRRDS-TASFAGQTSDLPPPTSSLGQLLSAYNKKNLNPT-DMVALSGAHTIGQAQCSSFNDHIYN-------DTNINSAFAASLRANCPRAGS-TALAPLDTTTPNAFDNAYYTNLLSQKGLLHSDQELFNSGSTDS 275          
The following BLAST results are available for this feature:
BLAST of FC931482 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 111
Match NameE-valueIdentityDescription
PER70_MAIZE2.876e-5452.44Peroxidase 70 OS=Zea mays GN=PER70 PE=1 SV=1[more]
PER25_ARATH4.906e-5452.07Peroxidase 25 OS=Arabidopsis thaliana GN=PER25 PE=... [more]
PER67_ARATH6.408e-5450.43Peroxidase 67 OS=Arabidopsis thaliana GN=PER67 PE=... [more]
PER1_WHEAT8.369e-5451.12Peroxidase OS=Triticum aestivum PE=2 SV=1[more]
PER68_ARATH1.864e-5351.74Peroxidase 68 OS=Arabidopsis thaliana GN=PER68 PE=... [more]
PER2_ARAHY7.085e-5349.77Cationic peroxidase 2 OS=Arachis hypogaea GN=PNC2 ... [more]
PER11_ARATH1.208e-5247.26Peroxidase 11 OS=Arabidopsis thaliana GN=PER11 PE=... [more]
PER1_HORVU5.998e-5250.88Peroxidase 1 OS=Hordeum vulgare PE=2 SV=1[more]
PER17_ARATH1.745e-5147.25Peroxidase 17 OS=Arabidopsis thaliana GN=PER17 PE=... [more]
PER66_MAIZE2.279e-5148.89Peroxidase 66 OS=Zea mays GN=PER66 PE=1 SV=1[more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionC34105F01EF PostHarvP1 Citrus clementina cDNA clone C34105F01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931482 ID=FC931482; Name=FC931482; organism=Citrus clementina; type=EST; length=718bp
CAGCCTTATCAGGCTTCATTTCCATGACTGTTTTGTTAATGGCTGTGATG
CATCAGTTTTGTTGGACAACACTACAACCATAGACAGTGAGAAATTTGCT
GCGCCAAATAATAATTCGGCGAGGGGTTTTGAAGTTATTGATCAGATGAA
AGCTGCCGTTGAAAAGGCCTGTCCAAGGGTTGTTTCCTGTGCTGATATTC
TCACTATTGCAGCTGAACAATCTGTTGCTTTGTCAGGGGGTCCTTCGTGG
ACAAATCTATTGGGAAGAAGAGACAGCAGAACAGCAAACAGAACTCTTGC
AAATCAGAATCTTCCATCACCGTTTGATACTCTTGACAGGCTCAAAGCTA
GTTTTAGAAATGTCGGCCTCAACGATAATTTTGATCTTGTTGCACTCTCC
GGAGCTCACACATTTGGAAGGGCTCAGTGCCGATTTTTCAGCGTAAGATT
ATTCAATTTCAACAACACTGGCAATCCAGACCCAACCCTAGACGCAACCT
TCTTACAACAACTGAGGCAACTATGCCCACAAGGTGGAAACGGCAGCGTT
CTAACAAATTTAGACGTCACAACACCTAATGTTTTCGACAACAAATACTT
CTCCAATCTCAGAAACCGCAAAGGCCTTCTGCAGAGTGATCAAGAGCTGT
TTTCGACTCCCGGTGCCGATACCATTGACATTGTCAATGTCTTTCGCAAG
AACAGGCTGCTTTCTTTA
back to top