FC931482

Overview
NameFC931482
Unique NameFC931482
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length718
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC931482 vs. ExPASy Swiss-Prot
Match: PER24_ARATH (Peroxidase 24 OS=Arabidopsis thaliana GN=PER24 PE=2 SV=1)

HSP 1 Score: 169.088 bits (427), Expect = 2.138e-41
Identity = 104/238 (43.70%), Postives = 134/238 (56.30%), Query Frame = 2
Query:    5 LIRLHFHDCFVNGCDASVLLDNTT-TIDSEKFAAPNNNSARGFEVIDQMKAAVEKACPRVVSCADILTIAAEQSVALS-GGPSWTNLLGRRDSRTANRTLANQNLPSPFDTLDRLKASFRNVGLNDNFDLVALSGAHTFGRAQCRFFSVRLFNFNNTGNPDPTLDATFLQQLRQLCPQGG---NGSVLTNLDVTTPNVFDNKYFSNLRNRKGLLQSDQELFSTPGADTIDIVNVFRKN 703
            L+R+H+HDCFV GCDAS+LLD+      SEK A P N S  GFE+ID++K  +EK CP  VSCADILT+AA  +V+     P W    GR D R +  T A ++LPS       L+  F    L D  DLVALSGAHT G A C  F  RL NF   G+ DP+L+ ++   L+  C       N S +  +D T P  FD+ YF +L   KGL  SD  L + P A    I +VF+ +
Sbjct:   80 LLRVHYHDCFVRGCDASLLLDSVAGKAVSEKEARP-NLSLSGFEIIDEIKYILEKRCPNTVSCADILTLAARDAVSYEFERPLWNVFTGRVDGRVSLATEAARDLPSAGANFTTLQKLFAESDL-DVVDLVALSGAHTIGIAHCGVFGRRLLNFTGKGDTDPSLNPSYASFLKSECSDKSLRLNPSAVVGMDPTGPLAFDSGYFVSLLKNKGLFTSDAALLTDPSA--AHIASVFQNS 313          
BLAST of FC931482 vs. ExPASy Swiss-Prot
Match: PER48_ARATH (Putative Peroxidase 48 OS=Arabidopsis thaliana GN=PER48 PE=2 SV=3)

HSP 1 Score: 168.703 bits (426), Expect = 2.792e-41
Identity = 101/257 (39.30%), Postives = 135/257 (52.53%), Query Frame = 2
Query:    5 LIRLHFHDCFVNGCDASVLLDNTTTIDSEKFAAPNNNSARGFEVIDQMKAAVEKACPRVVSCADILTIAAEQSVALSGGPSWTNLLGRRDSRTANRTLANQNLPSPFDTLDRLKASFRNVGLNDNFDLVALSGAHTFGRAQCRFFSVRLFNFNNTGNPDPTLDATFLQQLRQLCPQGGNGSVLTNLDVTTPNV---------------------------------------FDNKYFSNLRNRKGLLQSDQELFST 658
            +IRL FHDCF+ GCDASVLLD      SEK A+PN  S +GF+VID +K+ +E  CP VVSCAD+L +AA ++V ++GGP +    GR+DS  A R  A   LP+P  TL  +   F   G N+  + V+L GAH+ G   C FF  RL+NF+ TG PDP L+  FLQ+L+  CP     SV T+     P++                                       F  +YF  L   KGL+ SDQ+L  +
Sbjct:  102 IIRLLFHDCFIEGCDASVLLDADEAHTSEKDASPNL-SLKGFDVIDAVKSELENVCPGVVSCADLLVLAAREAVLVAGGPFYPLETGRKDSAAAYRDFAEHELPAPDATLSVILQRFSFRGFNER-ETVSLFGAHSIGITHCTFFKNRLYNFSATGKPDPELNPGFLQELKTKCP----FSVSTSSPSAPPDIGLPPSLPASDSENSYGMSSGNRNDEVIDLSYNNEGGDENFGTRYFRRLMQNKGLMSSDQQLMGS 352          
BLAST of FC931482 vs. ExPASy Swiss-Prot
Match: PER13_ARATH (Peroxidase 13 OS=Arabidopsis thaliana GN=PER13 PE=1 SV=2)

HSP 1 Score: 168.318 bits (425), Expect = 3.647e-41
Identity = 100/217 (46.08%), Postives = 134/217 (61.75%), Query Frame = 2
Query:    5 LIRLHFHDCFVNGCDASVLLDNTTTIDSEKFAAPNNNSARGFEVIDQMKAAVEKACPRVVSCADILTIAAEQSVALSGGPSWTNLLGRRDSRTANRTLANQNLPSPFDTLDRLKASFRNVGLNDNFDLVALS-GAHTFGRAQCRFFSVRLFNFNNTGNPDPTLDATFLQQLRQLCPQGGNGSVLTNLDVTTPNVFDNKYFSNLRNRKGLLQSDQELF 652
            L+RL FHDCFV GCD S+L+ +    D E+FAA N   A GF+VID+ K+ +E+ CP VVSCADI+ +AA  ++A + GP +    GRRD   AN   A +NLP   D+++ LK+ FR  GL+D  DLV LS GAHT G   C F   RL         DPT++  F Q LR  CPQGG+ +V   LD  +  VFDN+ F N++N +G++ SD  L+
Sbjct:   58 LLRLQFHDCFVEGCDGSILIKHGGN-DDERFAAGNAGVA-GFDVIDEAKSELERFCPGVVSCADIVALAARDAIAEAKGPFYEVPTGRRDGLIANVDHA-KNLPDVQDSINTLKSKFREKGLSDQ-DLVLLSAGAHTIGTTACFFVIPRL------DAQDPTINPEFFQILRSKCPQGGDVNVRIPLDWDSQFVFDNQIFQNIKNGRGVILSDSVLY 264          
BLAST of FC931482 vs. ExPASy Swiss-Prot
Match: PER55_ARATH (Peroxidase 55 OS=Arabidopsis thaliana GN=PER55 PE=1 SV=1)

HSP 1 Score: 166.392 bits (420), Expect = 1.386e-40
Identity = 96/217 (44.24%), Postives = 127/217 (58.53%), Query Frame = 2
Query:    8 IRLHFHDCFVNGCDASVLLDNTTTIDSEKFAAPNNNSAR-GFEVIDQMKAAVEKACPRVVSCADILTIAAEQSVALSGGPSWTNLLGRRDSRTANRTLANQNLPSPFDTLDRLKASFRNVGLNDNFDLVALSGAHTFGRAQCRFFSVRLFNFNNTGNPDPTLDATFLQQLRQLCPQGGNGSVLTNLDVTTPNVFDNKYFSNLRNRKGLLQSDQELFS 655
            +R+ FHDCFV GCDASV + +    D+EK A  N + A  GF+ + + K AVE  CP VVSCADIL +AA   V L GGP +   LGRRD   +  +     LP P   +  L   F + GL+   D++ALSGAHT G + C  F+ RL NF+     DPT+D  + QQL Q C    N   + ++D+T+ + FDN Y+ NL  RKGL  SDQ LF+
Sbjct:   67 LRMFFHDCFVEGCDASVFIASENE-DAEKDADDNKSLAGDGFDTVIKAKTAVESQCPGVVSCADILALAARDVVVLVGGPEFKVELGRRDGLVSKASRVTGKLPEPGLDVRGLVQIFASNGLSLT-DMIALSGAHTIGSSHCNRFANRLHNFSTFMPVDPTMDPVYAQQLIQAC-SDPNPDAVVDIDLTSRDTFDNSYYQNLVARKGLFTSDQALFN 280          
BLAST of FC931482 vs. ExPASy Swiss-Prot
Match: PER61_ARATH (Probable peroxidase 61 OS=Arabidopsis thaliana GN=PER61 PE=2 SV=1)

HSP 1 Score: 166.007 bits (419), Expect = 1.810e-40
Identity = 95/229 (41.48%), Postives = 131/229 (57.21%), Query Frame = 2
Query:    5 LIRLHFHDCFVNGCDASVLLDNTTTIDSEKFAAPNNNSARGFEVIDQMKAAVEKACPRVVSCADILTIAAEQSVALSGGPSWTNLLGRRDSRTANRTLANQNLPSPFDTLDRLKASFRNVGLNDNFDLVALSGAHTFGRAQCRFFSVRLFNFNNTGNPDPTLDATFLQQLRQLCP---QGGNGS--VLTNLDVTTPNVFDNKYFSNLRNRKGLLQSDQELFSTPGADTI 676
            L+RL + DC VNGCD S+LL      +SE+  AP N    GF +ID++K  +E  CP VVSCADIL +A   +V ++G PS+    GRRD  T N      +LPSP  ++D   A F++ GL D  D+  L GAH+ G+  C +   RL+NF NTG PDPT++ T + QLR LCP   Q G     V  N D  + N F + Y+S + +   +L+ DQEL +   +  I
Sbjct:   71 LLRLLYSDCMVNGCDGSILLQGP---NSER-TAPQNRGLGGFVIIDKIKQVLESRCPGVVSCADILNLATRDAVHMAGAPSYPVFTGRRDGGTLNADAV--DLPSPSISVDESLAYFKSKGL-DVLDMTTLLGAHSMGKTHCSYVVDRLYNFKNTGKPDPTMNTTLVSQLRYLCPPRTQKGQTDPLVYLNPDSGSSNRFTSSYYSRVLSHNAVLRVDQELLNNDDSKEI 292          
BLAST of FC931482 vs. ExPASy Swiss-Prot
Match: PER47_ARATH (Peroxidase 47 OS=Arabidopsis thaliana GN=PER47 PE=2 SV=1)

HSP 1 Score: 166.007 bits (419), Expect = 1.810e-40
Identity = 102/234 (43.59%), Postives = 137/234 (58.55%), Query Frame = 2
Query:    5 LIRLHFHDCFVNGCDASVLLDNTTTIDSEKFAAPNNNSARGFEVIDQMKAAVEKACPRVVSCADILTIAAEQSVALSGGPSWTNLLGRRDSRTANRTLANQNLPSPFDTLDRLKASFRNVGLNDNFDLVALSGAHTFGRAQCRFFSVRLFNFNNTGNPDPTLDATFLQQLRQLCPQGGNGSVLTNLDVTTPNVFDNKYFSNLRNRKGLLQSDQELFSTPGADTIDIVNVFRKNR 706
            LIR+ FHDCF+ GCDAS+LLD+T    +EK  +P N S RG+E+ID  K  +E  CP VVSCADI+ +AA  +V  +GGP +    GR D +  ++    +NLPSPF    +L  +F   G     D+VALSGAHT G A+C  F  RL        PD +LD+TF   L + C  G N     +    T N FDN YF+ L+ + G+L SDQ LF+TP   T ++VN +  N+
Sbjct:   60 LIRMLFHDCFIEGCDASILLDSTKDNTAEK-DSPANLSLRGYEIIDDAKEKIENRCPGVVSCADIVAMAARDAVFWAGGPYYDIPKGRFDGK-RSKIEDTRNLPSPFLNASQLIQTFGQRGFTPQ-DVVALSGAHTLGVARCSSFKARL------TVPDSSLDSTFANTLSKTCSAGDNAEQPFD---ATRNDFDNAYFNALQMKSGVLFSDQTLFNTP--RTRNLVNGYALNQ 279          
BLAST of FC931482 vs. ExPASy Swiss-Prot
Match: PER73_ARATH (Peroxidase 73 OS=Arabidopsis thaliana GN=PER73 PE=1 SV=1)

HSP 1 Score: 163.696 bits (413), Expect = 8.983e-40
Identity = 93/219 (42.47%), Postives = 126/219 (57.53%), Query Frame = 2
Query:    8 IRLHFHDCFVNGCDASVLLDNTTTIDSEKFAAPNNNSAR-GFEVIDQMKAAVEK--ACPRVVSCADILTIAAEQSVALSGGPSWTNLLGRRDSRTANRTLANQNLPSPFDTLDRLKASFRNVGLNDNFDLVALSGAHTFGRAQCRFFSVRLFNFNNTGNPDPTLDATFLQQLRQLCPQGGNGSVLTNLDVTTPNVFDNKYFSNLRNRKGLLQSDQELFS 655
            +RL FHDCFVNGCDASV++ +T T  +EK    N + A  GF+V+ + K A++   +C   VSCADIL +A    V  + GPS+   LGR D   +     N NLP P + +  L   F    L    D++ALS AHT G A C     R++NFN T   DPTL+  + ++L+  CP+  +  +  N+D TTP  FDN YF NL+  KGL  SDQ LF+
Sbjct:   62 LRLFFHDCFVNGCDASVMIQSTPTNKAEKDHPDNISLAGDGFDVVIKAKKALDAIPSCKNKVSCADILALATRDVVVAAKGPSYAVELGRFDGLVSTAASVNGNLPGPNNKVTELNKLFAKNKLTQE-DMIALSAAHTLGFAHCGKVFNRIYNFNLTHAVDPTLNKAYAKELQLACPKTVDPRIAINMDPTTPRQFDNIYFKNLQQGKGLFTSDQVLFT 279          
BLAST of FC931482 vs. ExPASy Swiss-Prot
Match: PERN_IPOBA (Neutral peroxidase OS=Ipomoea batatas PE=1 SV=1)

HSP 1 Score: 162.925 bits (411), Expect = 1.532e-39
Identity = 97/220 (44.09%), Postives = 123/220 (55.91%), Query Frame = 2
Query:    2 SLIRLHFHDCFVNGCDASVLLDNTTTIDSEKFAAPNNNSARGFEVIDQMKAAVEKACPRV-VSCADILTIAAEQSVALSGGPSWTNLLGRRDSRTANRTLANQNLPSPFDTLDRLKASFRNVGLNDNFDLVALSGAHTFGRAQCRFFSVRLFNFNNTGNPDPTLDATFLQQLRQLCPQGGNGSVLTNLDVTTPNVFDNKYFSNLRNRKGLLQSDQELFST 658
            SLIRLHFHDCFV+GCD  +LL++T     E+ A  N+NS RGF VIDQ K   +  C    VSCAD+L IAA  +       ++   LGR+D+RTAN T AN  LP+PFD L    A F + G N   ++V L+GAHT G ++C   +V   + N   N   TL  T        CP   N + L  LD  +P  FD KYF  L   +GLL SDQEL  +
Sbjct:   93 SLIRLHFHDCFVDGCDGGILLNDTANFTGEQGAPANSNSVRGFSVIDQAKRNAQTKCADTPVSCADVLAIAARDAFRKFTNQTYNITLGRQDARTANLTGANTQLPAPFDNLSIQTAKFADKGFNQR-EMVVLAGAHTVGFSRC---AVLCTSTNLNQNRSATLQCT--------CPASANDTGLVGLD-PSPGTFDKKYFEELVKGQGLLFSDQELMQS 299          
BLAST of FC931482 vs. ExPASy Swiss-Prot
Match: PER60_ARATH (Peroxidase 60 OS=Arabidopsis thaliana GN=PER60 PE=1 SV=1)

HSP 1 Score: 161.77 bits (408), Expect = 3.414e-39
Identity = 96/222 (43.24%), Postives = 135/222 (60.81%), Query Frame = 2
Query:    2 SLIRLHFHDCFVNGCDASVLLDNTTTIDSEKFAAPNNNSARGFEVIDQMKAAVEKACPRVVSCADILTIAAEQSVAL-SGGPSWTNL-LGRRDSRTANRTLANQNLPSPFDTLDRLKASF--RNVGLNDNFDLVALSGAHTFGRAQCRFFSVRLFNFNNTGNPDPTLDATFLQQLRQLCPQGGNGSVLTNLD--VTTPNVFDNKYFSNLRNRKGLLQSDQEL 649
            ++IRL+FHDCF NGCDAS+LLD +   +SEK A+PN  S RG+EVID +K+AVEK C RVVSCADI+ +A    V L SGG +   +  GR D + ++  L +  LPSP  T+    A F  R + LND   +V L G HT G   C F   RL+NF NT  PDP++D   +++L   CP+  +   + +LD   T+ N  D  ++  ++  +G+L  DQ+L
Sbjct:   61 AMIRLYFHDCFSNGCDASLLLDGS---NSEKKASPNL-SVRGYEVIDDIKSAVEKECDRVVSCADIIALATRDLVTLASGGKTRYEIPTGRLDGKISSALLVD--LPSPKMTVAETAAKFDQRKLSLND---MVLLLGGHTIGVTHCSFIMDRLYNFQNTQKPDPSMDPKLVEELSAKCPKSSSTDGIISLDQNATSSNTMDVSFYKEIKVSRGVLHIDQKL 273          
BLAST of FC931482 vs. ExPASy Swiss-Prot
Match: PERX_SOLTU (Suberization-associated anionic peroxidase OS=Solanum tuberosum PE=2 SV=2)

HSP 1 Score: 160.999 bits (406), Expect = 5.823e-39
Identity = 103/220 (46.82%), Postives = 130/220 (59.09%), Query Frame = 2
Query:    2 SLIRLHFHDCFVNGCDASVLLDNTT-TIDSEKFAAPNNNSARGFEVIDQMKAAVEKACPRV-VSCADILTIAAEQSVALSGGPSWTNLLGRRDSRTANRTLANQNLPSPFD--TLDRLKASFRNVGLNDNFDLVALSGAHTFGRAQCRFFSVRLFNFNNTGNPDPTLDATFLQQLRQLCPQGGNGSVLTNLDVTTPNVFDNKYFSNLRNRKGLLQSDQEL 649
            SLIRLHFHDCFV+GCD  +LLD+   T   E+ + PN NSARG+EVI Q K +V   CP + VSCADIL IAA  SVA  GG ++   LGR D+RTAN T A   LP+PFD  T+   K + +N  L    ++VAL+GAHT G A+C            +GN +P        QL+  C      S L  LD TTP +FD  Y+ NL N +G++ SDQ L
Sbjct:  102 SLIRLHFHDCFVDGCDGGILLDDINGTFTGEQNSPPNANSARGYEVIAQAKQSVIDTCPNISVSCADILAIAARDSVAKLGGQTYNVALGRSDARTANFTGALTQLPAPFDNLTVQIQKFNDKNFTLR---EMVALAGAHTVGFARCS-------TVCTSGNVNPA------AQLQCNCSATLTDSDLQQLD-TTPTMFDKVYYDNLNNNQGIMFSDQVL 304          
The following BLAST results are available for this feature:
BLAST of FC931482 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 111
Match NameE-valueIdentityDescription
PER24_ARATH2.138e-4143.70Peroxidase 24 OS=Arabidopsis thaliana GN=PER24 PE=... [more]
PER48_ARATH2.792e-4139.30Putative Peroxidase 48 OS=Arabidopsis thaliana GN=... [more]
PER13_ARATH3.647e-4146.08Peroxidase 13 OS=Arabidopsis thaliana GN=PER13 PE=... [more]
PER55_ARATH1.386e-4044.24Peroxidase 55 OS=Arabidopsis thaliana GN=PER55 PE=... [more]
PER61_ARATH1.810e-4041.48Probable peroxidase 61 OS=Arabidopsis thaliana GN=... [more]
PER47_ARATH1.810e-4043.59Peroxidase 47 OS=Arabidopsis thaliana GN=PER47 PE=... [more]
PER73_ARATH8.983e-4042.47Peroxidase 73 OS=Arabidopsis thaliana GN=PER73 PE=... [more]
PERN_IPOBA1.532e-3944.09Neutral peroxidase OS=Ipomoea batatas PE=1 SV=1[more]
PER60_ARATH3.414e-3943.24Peroxidase 60 OS=Arabidopsis thaliana GN=PER60 PE=... [more]
PERX_SOLTU5.823e-3946.82Suberization-associated anionic peroxidase OS=Sola... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionC34105F01EF PostHarvP1 Citrus clementina cDNA clone C34105F01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931482 ID=FC931482; Name=FC931482; organism=Citrus clementina; type=EST; length=718bp
CAGCCTTATCAGGCTTCATTTCCATGACTGTTTTGTTAATGGCTGTGATG
CATCAGTTTTGTTGGACAACACTACAACCATAGACAGTGAGAAATTTGCT
GCGCCAAATAATAATTCGGCGAGGGGTTTTGAAGTTATTGATCAGATGAA
AGCTGCCGTTGAAAAGGCCTGTCCAAGGGTTGTTTCCTGTGCTGATATTC
TCACTATTGCAGCTGAACAATCTGTTGCTTTGTCAGGGGGTCCTTCGTGG
ACAAATCTATTGGGAAGAAGAGACAGCAGAACAGCAAACAGAACTCTTGC
AAATCAGAATCTTCCATCACCGTTTGATACTCTTGACAGGCTCAAAGCTA
GTTTTAGAAATGTCGGCCTCAACGATAATTTTGATCTTGTTGCACTCTCC
GGAGCTCACACATTTGGAAGGGCTCAGTGCCGATTTTTCAGCGTAAGATT
ATTCAATTTCAACAACACTGGCAATCCAGACCCAACCCTAGACGCAACCT
TCTTACAACAACTGAGGCAACTATGCCCACAAGGTGGAAACGGCAGCGTT
CTAACAAATTTAGACGTCACAACACCTAATGTTTTCGACAACAAATACTT
CTCCAATCTCAGAAACCGCAAAGGCCTTCTGCAGAGTGATCAAGAGCTGT
TTTCGACTCCCGGTGCCGATACCATTGACATTGTCAATGTCTTTCGCAAG
AACAGGCTGCTTTCTTTA
back to top