FC931485

Overview
NameFC931485
Unique NameFC931485
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length754
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig10680 contig Ccv1_Contig10680:105..871. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC931485 vs. ExPASy Swiss-Prot
Match: PER35_ARATH (Peroxidase 35 OS=Arabidopsis thaliana GN=PER35 PE=1 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 4.863e-22
Identity = 45/116 (38.79%), Postives = 65/116 (56.03%), Query Frame = 1
Query:  127 LSWTFYDQSCPKLESIVRKQIQNALKKDIGLAAGLIRIHFHDCFVQGCDGSVLLEG---STSEQNARPNLSLRKEALKFVDDLRARV--HKECGRVVSCADILALAARDSVALSGG 459
            LS  FY ++CP +E IVR  +Q  +KK        +R+ FHDCFV GCD SV+++    + +E++   N+SL  +    V   +  +  +  C   VSCADIL LA RD V  +GG
Sbjct:   27 LSRGFYSKTCPNVEQIVRNAVQKKIKKTFVAVPATLRLFFHDCFVNGCDASVMIQSTPKNKAEKDHPDNISLAGDGFDVVIQAKKALDSNPSCRNKVSCADILTLATRDVVVAAGG 142          

HSP 2 Score: 40.4318 bits (93), Expect = 4.863e-22
Identity = 22/69 (31.88%), Postives = 33/69 (47.83%), Query Frame = 3
Query:  462 NYDLPLGRRD---SKTFATVVNLPSPFSNTTVILNDFREKTFNARETVALSGGHTVGLAHCPAFTNRLY 659
            +Y++ LGR D   S   +   NLP P  N   +   F +      + +ALS  HT+G AHC     R++
Sbjct:  144 SYEVELGRFDGLVSTASSVEGNLPGPSDNVDKLNALFTKNKLTQEDMIALSAAHTLGFAHCGKVFKRIH 212          
BLAST of FC931485 vs. ExPASy Swiss-Prot
Match: PER73_ARATH (Peroxidase 73 OS=Arabidopsis thaliana GN=PER73 PE=1 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 4.863e-22
Identity = 44/116 (37.93%), Postives = 63/116 (54.31%), Query Frame = 1
Query:  127 LSWTFYDQSCPKLESIVRKQIQNALKKDIGLAAGLIRIHFHDCFVQGCDGSVLLEG---STSEQNARPNLSLRKEALKFVDDLRARVH--KECGRVVSCADILALAARDSVALSGG 459
            L   FY  SCP +E IV+K +Q  +K+        +R+ FHDCFV GCD SV+++    + +E++   N+SL  +    V   +  +     C   VSCADILALA RD V  + G
Sbjct:   27 LKTNFYGNSCPNVEQIVKKVVQEKIKQTFVTIPATLRLFFHDCFVNGCDASVMIQSTPTNKAEKDHPDNISLAGDGFDVVIKAKKALDAIPSCKNKVSCADILALATRDVVVAAKG 142          

HSP 2 Score: 44.669 bits (104), Expect = 4.863e-22
Identity = 27/75 (36.00%), Postives = 37/75 (49.33%), Query Frame = 3
Query:  462 NYDLPLGRRDS--KTFATVV-NLPSPFSNTTVILNDFREKTFNARETVALSGGHTVGLAHCPAFTNRLYPNKTPH 677
            +Y + LGR D    T A+V  NLP P +  T +   F +      + +ALS  HT+G AHC    NR+Y     H
Sbjct:  144 SYAVELGRFDGLVSTAASVNGNLPGPNNKVTELNKLFAKNKLTQEDMIALSAAHTLGFAHCGKVFNRIYNFNLTH 218          
BLAST of FC931485 vs. ExPASy Swiss-Prot
Match: PER54_ARATH (Peroxidase 54 OS=Arabidopsis thaliana GN=PER54 PE=2 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 5.427e-22
Identity = 53/114 (46.49%), Postives = 74/114 (64.91%), Query Frame = 1
Query:  127 LSWTFYDQSCPKLESIVRKQIQNALKKDIGLAAGLIRIHFHDCFVQGCDGSVLLEGST---SEQNARPNLSLRKEALKFVDDLRARVHKECGRVVSCADILALAARDSVALSGG 459
            L+ TFY  +CP   +IVR  IQ AL+ D  +   LIR+HFHDCFV GCDGS+LL+ ++   SE+NA  N +  +     VD ++  +   C  +VSC+DILALA+  SV+L+GG
Sbjct:   33 LNATFYSGTCPNASAIVRSTIQQALQSDARIGGSLIRLHFHDCFVNGCDGSLLLDDTSSIQSEKNAPANANSTR-GFNVVDSIKTALENACPGIVSCSDILALASEASVSLAGG 145          
BLAST of FC931485 vs. ExPASy Swiss-Prot
Match: PERN_IPOBA (Neutral peroxidase OS=Ipomoea batatas PE=1 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 8.220e-22
Identity = 41/103 (39.81%), Postives = 58/103 (56.31%), Query Frame = 1
Query:  145 DQSCPKLESIVRKQIQNALKKDIGLAAGLIRIHFHDCFVQGCDGSVLLEGS---TSEQNARPNLSLRKEALKFVDDLRARVHKECGRV-VSCADILALAARDS 441
            D +C  + S V++ +  A+  +  + A LIR+HFHDCFV GCDG +LL  +   T EQ A  N S        +D  +     +C    VSCAD+LA+AARD+
Sbjct:   68 DSNC--VFSAVKEIVDAAITAETRMGASLIRLHFHDCFVDGCDGGILLNDTANFTGEQGAPAN-SNSVRGFSVIDQAKRNAQTKCADTPVSCADVLAIAARDA 167          

HSP 2 Score: 52.7582 bits (125), Expect = 8.220e-22
Identity = 25/60 (41.67%), Postives = 36/60 (60.00%), Query Frame = 3
Query:  465 YDLPLGRRDSKTFATV---VNLPSPFSNTTVILNDFREKTFNARETVALSGGHTVGLAHC 635
            Y++ LGR+D++T         LP+PF N ++    F +K FN RE V L+G HTVG + C
Sbjct:  176 YNITLGRQDARTANLTGANTQLPAPFDNLSIQTAKFADKGFNQREMVVLAGAHTVGFSRC 235          
BLAST of FC931485 vs. ExPASy Swiss-Prot
Match: PER19_ARATH (Peroxidase 19 OS=Arabidopsis thaliana GN=PER19 PE=2 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 8.665e-20
Identity = 59/145 (40.69%), Postives = 84/145 (57.93%), Query Frame = 1
Query:  106 KPPVAKG---LSWTFYDQSCPKLESIVRKQIQNALKKDIGLAAGLIRIHFHDCFVQGCDGSVLLE---GS--TSEQNARPNLSLRKEALKFVDDLRARVHKECGRVVSCADILALAARDSVALSGG---QITTYHWEGE--TAKH 501
            KPP  +    LS  +Y + CP+LE++V        K+    A   IR+ FHDCFV+GCDGS+L+E   GS   +E+ A  N  LR+E    +   +A V   C  +VSC+DILA+AARD + L+GG   Q+    W+G+  TAK+
Sbjct:   32 KPPAPRPHRELSADYYSKKCPQLETLVGSVTSQRFKEVPISAPATIRLFFHDCFVEGCDGSILIETKKGSKKLAEREAYENKELREEGFDSIIKAKALVESHCPSLVSCSDILAIAARDFIHLAGGPYYQVKKGRWDGKRSTAKN 176          
BLAST of FC931485 vs. ExPASy Swiss-Prot
Match: PER6_ARATH (Peroxidase 6 OS=Arabidopsis thaliana GN=PER6 PE=2 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 4.816e-18
Identity = 39/114 (34.21%), Postives = 64/114 (56.14%), Query Frame = 1
Query:  127 LSWTFYDQSCPKLESIVRKQIQNALKKDIGLAAGLIRIHFHDCFVQGCDGSVLLEGS---TSEQNARPNLSLRKEALKFVDDLRARVHKECGRVVSCADILALAARDSVALSGG 459
            LS  +Y ++CP+ E  + + + +        A G +R+ FHDC V GCD S+L+  +   TSE++A  N SL  +A   +  ++  V  +C  +VSC+DIL  A R  +++ GG
Sbjct:   22 LSSDYYTKTCPEFEETLVQIVTDKQIAAPTTAVGTLRLFFHDCMVDGCDASILVASTPRKTSERDADINRSLPGDAFDVITRIKTAVELKCPNIVSCSDILVGATRSLISMVGG 135          

HSP 2 Score: 36.965 bits (84), Expect = 4.816e-18
Identity = 14/37 (37.84%), Postives = 22/37 (59.46%), Query Frame = 3
Query:  549 ILNDFREKTFNARETVALSGGHTVGLAHCPAFTNRLY 659
            I++ F       +E VAL G HT+G +HC  F +R++
Sbjct:  169 IISIFESSGLTVQEMVALVGAHTIGFSHCKEFASRIF 205          
BLAST of FC931485 vs. ExPASy Swiss-Prot
Match: PERA_IPOBA (Anionic peroxidase OS=Ipomoea batatas PE=1 SV=1)

HSP 1 Score: 62.003 bits (149), Expect = 1.784e-17
Identity = 43/114 (37.72%), Postives = 64/114 (56.14%), Query Frame = 1
Query:  145 DQSCPKLESIVRKQIQNALKKDIGLAAGLIRIHFHDCFVQGCDGSVLLEGS---TSEQNAR-PNLSLRKEALKFVDDLRARVHKECGRV-VSCADILALAARDSVALSGGQITT 471
            D++C  + S V++ +  A+  +  + A LIR+ FHDCFV GCD  +LL  +   T EQ A   N S+R  A+  ++  +  V  +   + VSCADIL++AARDS     G   T
Sbjct:   67 DEAC--VFSAVKEVVVAAINAEARMGASLIRLFFHDCFVDGCDAGLLLNDTATFTGEQTAAGNNNSVRGFAV--IEQAKQNVKTQMPDMSVSCADILSIAARDSFEKFSGSTYT 176          

HSP 2 Score: 48.1358 bits (113), Expect = 1.784e-17
Identity = 26/63 (41.27%), Postives = 32/63 (50.79%), Query Frame = 3
Query:  459 ANYDLPLGRRDSKTF---ATVVNLPSPFSNTTVILNDFREKTFNARETVALSGGHTVGLAHCP 638
            + Y + LGR+D++T         L  P  N T  L  F  K FN  E VAL G HT+G A CP
Sbjct:  173 STYTVTLGRKDARTANFTGANTQLVGPNENLTSQLTKFAAKGFNGTEMVALLGSHTIGFARCP 235          
BLAST of FC931485 vs. ExPASy Swiss-Prot
Match: PER63_ARATH (Peroxidase 63 OS=Arabidopsis thaliana GN=PER63 PE=2 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 2.885e-15
Identity = 48/132 (36.36%), Postives = 71/132 (53.79%), Query Frame = 1
Query:  127 LSWTFYDQSCPKLESIVRKQIQNALKKDIGLAAGLIRIHFHDCFVQGCDGSVLLEG---STSEQNARPNLSLRKEALKFVDDLRARVHKECGRVVSCADILALAARDSVALSGG---QITTYHWEGETAKHS 504
            L+  FY +SCPK   I+R+ I N        AA  +R+ FHDCF  GCD SVL+     +T+E+++  NLSL  +    V   +  +   C   VSC+DI+A+A RD +   GG   +I+    +  T+K S
Sbjct:   32 LTVDFYSKSCPKFLDIIRETITNKQISTPTTAAAALRLFFHDCFPNGCDASVLVSSTAFNTAERDSSINLSLPGDGFDVVIRAKTALELACPNTVSCSDIIAVAVRDLLVTVGGPYYEISLGRRDSRTSKSS 163          
The following BLAST results are available for this feature:
BLAST of FC931485 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 108
Match NameE-valueIdentityDescription
PER35_ARATH4.863e-2238.79Peroxidase 35 OS=Arabidopsis thaliana GN=PER35 PE=... [more]
PER73_ARATH4.863e-2237.93Peroxidase 73 OS=Arabidopsis thaliana GN=PER73 PE=... [more]
PER54_ARATH5.427e-2246.49Peroxidase 54 OS=Arabidopsis thaliana GN=PER54 PE=... [more]
PERN_IPOBA8.220e-2239.81Neutral peroxidase OS=Ipomoea batatas PE=1 SV=1[more]
PER19_ARATH8.665e-2040.69Peroxidase 19 OS=Arabidopsis thaliana GN=PER19 PE=... [more]
PER6_ARATH4.816e-1834.21Peroxidase 6 OS=Arabidopsis thaliana GN=PER6 PE=2 ... [more]
PERA_IPOBA1.784e-1737.72Anionic peroxidase OS=Ipomoea batatas PE=1 SV=1[more]
PER63_ARATH2.885e-1536.36Peroxidase 63 OS=Arabidopsis thaliana GN=PER63 PE=... [more]

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Properties
Property NameValue
Genbank descriptionC34105F04EF PostHarvP1 Citrus clementina cDNA clone C34105F04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931485 ID=FC931485; Name=FC931485; organism=Citrus clementina; type=EST; length=754bp
GAACCCAAAGCGAGGTAATCAACAATGGCAACTGCTTCAGCTTCTTCTTT
CATTTCTCTTCTTTTGATATCTTCTCTTTTGCTTGCTTCTTTCACTGAGG
CACAAAAGCCCCCAGTAGCGAAAGGTCTCTCATGGACTTTTTATGACCAG
AGCTGTCCCAAGCTTGAATCCATTGTCAGAAAACAGATCCAAAATGCCCT
GAAAAAAGATATCGGCCTAGCTGCTGGCTTGATTCGCATCCATTTCCACG
ATTGCTTCGTTCAGGGATGTGATGGATCAGTGTTGCTAGAGGGATCAACT
AGTGAGCAAAATGCACGTCCAAACCTAAGCTTAAGGAAGGAGGCTTTAAA
ATTTGTAGACGATCTTCGTGCTCGTGTTCACAAGGAGTGTGGCAGAGTTG
TTTCTTGTGCTGATATTCTTGCCCTTGCTGCTCGCGATTCTGTTGCCTTG
TCTGGAGGGCAAATTACGACCTACCATTGGGAAGGCGAGACAGCAAAACA
TTCGCAACAGTGGTAAATCTGCCATCACCGTTCAGCAACACCACCGTGAT
CCTCAACGATTTCCGAGAAAAAACCTTCAACGCCAGGGAAACCGTGGCCC
TCTCCGGCGGGCACACCGTTGGGCTAGCTCACTGCCCTGCATTCACCAAT
CGCCTCTATCCCAACAAGACCCCACACTGGACAAACATTCGCCAACATCT
CAAAAGACATGCCCACTTCGGATTCCAACACACACGTCTTCGACATCGGT
CCCG
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