FC931485

Overview
NameFC931485
Unique NameFC931485
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length754
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC931485 vs. ExPASy Swiss-Prot
Match: PERX_NICSY (Lignin-forming anionic peroxidase OS=Nicotiana sylvestris PE=2 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 2.899e-33
Identity = 54/114 (47.37%), Postives = 73/114 (64.04%), Query Frame = 1
Query:  127 LSWTFYDQSCPKLESIVRKQIQNALKKDIGLAAGLIRIHFHDCFVQGCDGSVLLEGS---TSEQNARPNLSLRKEALKFVDDLRARVHKECGRVVSCADILALAARDSVALSGG 459
            LS TFYD +CP   + +R  ++ A+  +  +AA LIR+HFHDCFVQGCD S+LL+ +    SE+ A PNL   +     ++D +  V K C  VVSCADIL +AARD+ A  GG
Sbjct:   29 LSATFYDNTCPNALNTIRTSVRQAISSERRMAASLIRLHFHDCFVQGCDASILLDETPSIESEKTALPNLGSAR-GFGIIEDAKREVEKICPGVVSCADILTVAARDASAAVGG 141          

HSP 2 Score: 57.7658 bits (138), Expect = 2.899e-33
Identity = 29/73 (39.73%), Postives = 43/73 (58.90%), Query Frame = 3
Query:  462 NYDLPLGRRDSKTFATVV---NLPSPFSNTTVILNDFREKTFNARETVALSGGHTVGLAHCPAFTNRLYPNKT 671
            ++ + LGRRDS T +  +   +LP PF     +++ F  K  + R+ VALSG HT+G A C  F +R+Y N T
Sbjct:  143 SWTVKLGRRDSTTASKTLAETDLPGPFDPLNRLISSFASKGLSTRDMVALSGAHTIGQAQCFLFRDRIYSNGT 215          
BLAST of FC931485 vs. ExPASy Swiss-Prot
Match: PER4_VITVI (Peroxidase 4 OS=Vitis vinifera GN=GSVIVT00023967001 PE=1 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 3.776e-33
Identity = 55/115 (47.83%), Postives = 78/115 (67.83%), Query Frame = 1
Query:  127 LSWTFYDQSCPKLESIVRKQIQNALKKDIGLAAGLIRIHFHDCFVQGCDGSVLLEGS---TSEQNARPNL-SLRKEALKFVDDLRARVHKECGRVVSCADILALAARDSVALSGG 459
            LS  FY ++CPK+   V+  +Q+A+ K+  + A L+R+ FHDCFV GCD SVLL+ +   T EQ A PN  S+R   L  +D+++++V   C  VVSCADI+A+AARDSV + GG
Sbjct:   27 LSTNFYSKTCPKVFDTVKSGVQSAVSKERRMGASLLRLFFHDCFVNGCDASVLLDDTSSFTGEQTAVPNKNSIR--GLNVIDNIKSQVESVCPGVVSCADIIAIAARDSVVILGG 139          

HSP 2 Score: 57.3806 bits (137), Expect = 3.776e-33
Identity = 28/69 (40.58%), Postives = 45/69 (65.22%), Query Frame = 3
Query:  462 NYDLPLGRRDSKTFATVV---NLPSPFSNTTVILNDFREKTFNARETVALSGGHTVGLAHCPAFTNRLY 659
            ++D+ LGRRDSKT +      N+P P S+ + +++ F+ +  + R+ VALSG HT+G A C +F  R+Y
Sbjct:  141 DWDVKLGRRDSKTASLSGANNNIPPPTSSLSNLISKFQAQGLSTRDMVALSGAHTIGQARCTSFRARIY 209          
BLAST of FC931485 vs. ExPASy Swiss-Prot
Match: PER5_VITVI (Peroxidase 5 OS=Vitis vinifera GN=GSVIVT00037159001 PE=1 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 6.078e-33
Identity = 52/111 (46.85%), Postives = 73/111 (65.77%), Query Frame = 1
Query:  139 FYDQSCPKLESIVRKQIQNALKKDIGLAAGLIRIHFHDCFVQGCDGSVLLEGSTS----EQNARPNLSLRKEALKFVDDLRARVHKECGRVVSCADILALAARDSVALSGG 459
            FY  SC   E IV+ +++    +D G+A GL+R+HFHDCFV+GCDGSVL++ + S    + +   N SLR    + +D  +AR+   C  VVSCADI+A AARDSV ++GG
Sbjct:   65 FYRTSCGLAEFIVKDEVRKGFIRDSGVAPGLVRMHFHDCFVRGCDGSVLIDSTPSNTAEKDSPANNPSLR--GFEVIDSAKARLEAVCKGVVSCADIVAFAARDSVEITGG 173          

HSP 2 Score: 55.8398 bits (133), Expect = 6.078e-33
Identity = 28/68 (41.18%), Postives = 35/68 (51.47%), Query Frame = 3
Query:  465 YDLPLGRRDSK---TFATVVNLPSPFSNTTVILNDFREKTFNARETVALSGGHTVGLAHCPAFTNRLY 659
            YD+P GRRD +         NLP P      +   F  K     E V LSG HT+G +HC +F+NRLY
Sbjct:  176 YDVPAGRRDGRISLASEASTNLPPPTFTVDQLTQFFSNKGLTQDEMVTLSGAHTIGRSHCSSFSNRLY 243          

HSP 3 Score: 25.0238 bits (53), Expect = 6.078e-33
Identity = 17/39 (43.59%), Postives = 20/39 (51.28%), Query Frame = 2
Query:  659 SQQDPTLDKHSPTSQKT-CP-------LRIPTHTSSTSV 751
            S QDPTLD     S KT CP       L +P + SS S+
Sbjct:  249 SGQDPTLDPQYAASLKTQCPQGSTNTNLVVPMNPSSPSI 287          
BLAST of FC931485 vs. ExPASy Swiss-Prot
Match: PER1_ARAHY (Cationic peroxidase 1 OS=Arachis hypogaea GN=PNC1 PE=1 SV=2)

HSP 1 Score: 102.064 bits (253), Expect = 8.344e-33
Identity = 54/115 (46.96%), Postives = 74/115 (64.35%), Query Frame = 1
Query:  127 LSWTFYDQSCPKLESIVRKQIQNALKKDIGLAAGLIRIHFHDCFVQGCDGSVLLEGS---TSEQNARPNL-SLRKEALKFVDDLRARVHKECGRVVSCADILALAARDSVALSGG 459
            LS  FY   CP   S ++  + +A+ K+  + A L+R+HFHDCFVQGCD SVLL+ +   T E+ A PN  S+R    + +D ++++V   C  VVSCADILA+AARDSV   GG
Sbjct:   24 LSSNFYATKCPNALSTIKSAVNSAVAKEARMGASLLRLHFHDCFVQGCDASVLLDDTSNFTGEKTAGPNANSIR--GFEVIDTIKSQVESLCPGVVSCADILAVAARDSVVALGG 136          

HSP 2 Score: 59.6918 bits (143), Expect = 8.344e-33
Identity = 30/70 (42.86%), Postives = 44/70 (62.86%), Query Frame = 3
Query:  459 ANYDLPLGRRDSKTFATVV---NLPSPFSNTTVILNDFREKTFNARETVALSGGHTVGLAHCPAFTNRLY 659
            A++++ LGRRDS T +      +LP+PF N + +++ F  K F  +E V LSG HT+G A C AF  R+Y
Sbjct:  137 ASWNVLLGRRDSTTASLSSANSDLPAPFFNLSGLISAFSNKGFTTKELVTLSGAHTIGQAQCTAFRTRIY 206          
BLAST of FC931485 vs. ExPASy Swiss-Prot
Match: PER15_IPOBA (Peroxidase 15 OS=Ipomoea batatas GN=pod PE=1 SV=1)

HSP 1 Score: 108.612 bits (270), Expect = 1.086e-32
Identity = 55/115 (47.83%), Postives = 75/115 (65.22%), Query Frame = 1
Query:  127 LSWTFYDQSCPKLESIVRKQIQNALKKDIGLAAGLIRIHFHDCFVQGCDGSVLLEGS----TSEQNARPNLSLRKEALKFVDDLRARVHKECGRVVSCADILALAARDSVALSGG 459
            LS TFY  +CP + +IVR  +Q AL+ D  +   LIR+HFHDCFV GCDGS+LL+ +     SE++A PN +  +     VD+++  V   C  VVSC DILALA+  SV+L+GG
Sbjct:   25 LSSTFYSTTCPNVSAIVRTVVQQALQNDARIGGSLIRLHFHDCFVDGCDGSLLLDNNGTTIVSEKDALPNTNSTR-GFDVVDNIKTAVENACPGVVSCVDILALASESSVSLAGG 138          

HSP 2 Score: 52.7582 bits (125), Expect = 1.086e-32
Identity = 28/69 (40.58%), Postives = 38/69 (55.07%), Query Frame = 3
Query:  462 NYDLPLGRRDSKTF---ATVVNLPSPFSNTTVILNDFREKTFNARETVALSGGHTVGLAHCPAFTNRLY 659
            ++++ LGRRD +T        +LPSPF N T +   F     N  + VALSG HT G A C  F+ RL+
Sbjct:  140 SWNVLLGRRDRRTANQGGANTSLPSPFENLTNLTQKFTNVGLNVNDLVALSGAHTFGRAQCRTFSPRLF 208          
BLAST of FC931485 vs. ExPASy Swiss-Prot
Match: PER52_ARATH (Peroxidase 52 OS=Arabidopsis thaliana GN=PER52 PE=2 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 2.399e-32
Identity = 53/114 (46.49%), Postives = 75/114 (65.79%), Query Frame = 1
Query:  127 LSWTFYDQSCPKLESIVRKQIQNALKKDIGLAAGLIRIHFHDCFVQGCDGSVLLEGS---TSEQNARPNLSLRKEALKFVDDLRARVHKECGRVVSCADILALAARDSVALSGG 459
            L+  FY  SCP L S V+  +++A+  +  + A ++R+ FHDCFV GCDGS+LL+ +   T EQNA PN +  +     +D++++ V K C  VVSCADILA+AARDSV   GG
Sbjct:   30 LTTNFYSTSCPNLLSTVQTAVKSAVNSEARMGASILRLFFHDCFVNGCDGSILLDDTSSFTGEQNAAPNRNSAR-GFNVIDNIKSAVEKACPGVVSCADILAIAARDSVVALGG 142          

HSP 2 Score: 53.1434 bits (126), Expect = 2.399e-32
Identity = 24/69 (34.78%), Postives = 43/69 (62.32%), Query Frame = 3
Query:  462 NYDLPLGRRDSKTFATVV---NLPSPFSNTTVILNDFREKTFNARETVALSGGHTVGLAHCPAFTNRLY 659
            N+++ +GRRD++T +      N+P+P S+ + +++ F     + R+ VALSG HT+G + C  F  R+Y
Sbjct:  144 NWNVKVGRRDARTASQAAANSNIPAPTSSLSQLISSFSAVGLSTRDMVALSGAHTIGQSRCTNFRARIY 212          
BLAST of FC931485 vs. ExPASy Swiss-Prot
Match: PER62_ARATH (Peroxidase 62 OS=Arabidopsis thaliana GN=PER62 PE=2 SV=1)

HSP 1 Score: 112.079 bits (279), Expect = 2.400e-32
Identity = 56/108 (51.85%), Postives = 73/108 (67.59%), Query Frame = 1
Query:  139 FYDQSCPKLESIVRKQIQNALKKDIGLAAGLIRIHFHDCFVQGCDGSVLLEGSTSEQNARPNLSLRKEALKFVDDLRARVHKECGRVVSCADILALAARDSVALSGGQ 462
            FY  +CP  E+IVR  + +    D  +A GL+R+H HDCFVQGCDGSVLL G  SE+ A  N++L     + +DD + ++   C  VVSCADILALAARDSV+L+ GQ
Sbjct:   29 FYSTTCPNAETIVRTTVASHFGSDPKVAPGLLRMHNHDCFVQGCDGSVLLSGPNSERTAGANVNL--HGFEVIDDAKRQLEAACPGVVSCADILALAARDSVSLTNGQ 134          

HSP 2 Score: 48.1358 bits (113), Expect = 2.400e-32
Identity = 26/69 (37.68%), Postives = 37/69 (53.62%), Query Frame = 3
Query:  462 NYDLPLGRRDSKTF--ATVVNLPSPFSNTTVILNDFREKTFNARETVAL-SGGHTVGLAHCPAFTNRLY 659
            ++ +P GRRD +    + V NLPSP  +  +    F     N R+ V L  GGHT+G A C   TNR++
Sbjct:  135 SWQVPTGRRDGRVSLASNVNNLPSPSDSLAIQQRKFSAFRLNTRDLVTLVGGGHTIGTAACGFITNRIF 203          
BLAST of FC931485 vs. ExPASy Swiss-Prot
Match: PER2_CUCSA (Peroxidase 2 (Fragment) OS=Cucumis sativus PE=2 SV=1)

HSP 1 Score: 108.612 bits (270), Expect = 9.003e-32
Identity = 59/111 (53.15%), Postives = 74/111 (66.67%), Query Frame = 1
Query:  136 TFYDQSCPKLESIVRKQIQNALKKDIGLAAGLIRIHFHDCFVQGCDGSVLLE---GSTSEQNARPNLSLRKEALKFVDDLRARVHKECGRVVSCADILALAARDSVALSGG 459
            TFYD+SCP + +IVR+ +Q AL  D    A LIR+HFHDCFV GCDGSVLLE   G  SE  A  N ++       V++++A V K C  VVSCADILA+A+  SV L+GG
Sbjct:    1 TFYDESCPDVSNIVRRVVQQALVSDERAGARLIRLHFHDCFVNGCDGSVLLEDQPGVVSELAAPGNANI--TGFNIVNNIKAAVEKACPGVVSCADILAIASVGSVNLAGG 109          

HSP 2 Score: 49.6766 bits (117), Expect = 9.003e-32
Identity = 26/67 (38.81%), Postives = 36/67 (53.73%), Query Frame = 3
Query:  465 YDLPLGRRDSKTF---ATVVNLPSPFSNTTVILNDFREKTFNARETVALSGGHTVGLAHCPAFTNRL 656
            +++ LGRRDS+       +  LPSPF N T +   F     ++ + VALSG HT G + C  F  RL
Sbjct:  112 WEVQLGRRDSRRANLQGAIDGLPSPFENVTQLKRKFDRVDLDSTDLVALSGAHTFGKSRCQFFDRRL 178          
BLAST of FC931485 vs. ExPASy Swiss-Prot
Match: PER48_ARATH (Putative Peroxidase 48 OS=Arabidopsis thaliana GN=PER48 PE=2 SV=3)

HSP 1 Score: 98.5969 bits (244), Expect = 1.978e-31
Identity = 50/114 (43.86%), Postives = 74/114 (64.91%), Query Frame = 1
Query:  127 LSWTFYDQSCPKLESIVRKQIQNALKKDIGLAAGLIRIHFHDCFVQGCDGSVLL---EGSTSEQNARPNLSLRKEALKFVDDLRARVHKECGRVVSCADILALAARDSVALSGG 459
            L + +Y +SCP  E I+ K I++       +A  +IR+ FHDCF++GCD SVLL   E  TSE++A PNLSL+      +D +++ +   C  VVSCAD+L LAAR++V ++GG
Sbjct:   68 LHYDYYRESCPTAEKIIAKAIRDIYNVTPSVAPPIIRLLFHDCFIEGCDASVLLDADEAHTSEKDASPNLSLK--GFDVIDAVKSELENVCPGVVSCADLLVLAAREAVLVAGG 179          

HSP 2 Score: 58.5362 bits (140), Expect = 1.978e-31
Identity = 32/69 (46.38%), Postives = 42/69 (60.87%), Query Frame = 3
Query:  465 YDLPLGRRDS----KTFATVVNLPSPFSNTTVILNDFREKTFNARETVALSGGHTVGLAHCPAFTNRLY 659
            Y L  GR+DS    + FA    LP+P +  +VIL  F  + FN RETV+L G H++G+ HC  F NRLY
Sbjct:  182 YPLETGRKDSAAAYRDFAEH-ELPAPDATLSVILQRFSFRGFNERETVSLFGAHSIGITHCTFFKNRLY 249          
BLAST of FC931485 vs. ExPASy Swiss-Prot
Match: PER72_ARATH (Peroxidase 72 OS=Arabidopsis thaliana GN=PER72 PE=1 SV=1)

HSP 1 Score: 108.612 bits (270), Expect = 1.983e-31
Identity = 51/110 (46.36%), Postives = 75/110 (68.18%), Query Frame = 1
Query:  139 FYDQSCPKLESIVRKQIQNALKKDIGLAAGLIRIHFHDCFVQGCDGSVLLEGS---TSEQNARPNLSLRKEALKFVDDLRARVHKECGRVVSCADILALAARDSVALSGG 459
            FYDQSCPK + IV+  +  A + D  + A L+R+HFHDCFV+GCD S+LL+ S    SE+ + PN +  +   + +++++  + +EC   VSCADILALAARDS  ++GG
Sbjct:   37 FYDQSCPKAQEIVQSIVAKAFEHDPRMPASLLRLHFHDCFVKGCDASILLDSSGTIISEKRSNPNRNSAR-GFELIEEIKHALEQECPETVSCADILALAARDSTVITGG 145          

HSP 2 Score: 48.521 bits (114), Expect = 1.983e-31
Identity = 23/69 (33.33%), Postives = 43/69 (62.32%), Query Frame = 3
Query:  462 NYDLPLGRRDSKTFA---TVVNLPSPFSNTTVILNDFREKTFNARETVALSGGHTVGLAHCPAFTNRLY 659
            ++++PLGRRD++  +   +  ++P+P +    IL  F+ +  +  + V+LSG HT+G + C +F  RLY
Sbjct:  147 SWEVPLGRRDARGASLSGSNNDIPAPNNTFQTILTKFKRQGLDLVDLVSLSGSHTIGNSRCTSFRQRLY 215          
The following BLAST results are available for this feature:
BLAST of FC931485 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 108
Match NameE-valueIdentityDescription
PERX_NICSY2.899e-3347.37Lignin-forming anionic peroxidase OS=Nicotiana syl... [more]
PER4_VITVI3.776e-3347.83Peroxidase 4 OS=Vitis vinifera GN=GSVIVT0002396700... [more]
PER5_VITVI6.078e-3346.85Peroxidase 5 OS=Vitis vinifera GN=GSVIVT0003715900... [more]
PER1_ARAHY8.344e-3346.96Cationic peroxidase 1 OS=Arachis hypogaea GN=PNC1 ... [more]
PER15_IPOBA1.086e-3247.83Peroxidase 15 OS=Ipomoea batatas GN=pod PE=1 SV=1[more]
PER52_ARATH2.399e-3246.49Peroxidase 52 OS=Arabidopsis thaliana GN=PER52 PE=... [more]
PER62_ARATH2.400e-3251.85Peroxidase 62 OS=Arabidopsis thaliana GN=PER62 PE=... [more]
PER2_CUCSA9.003e-3253.15Peroxidase 2 (Fragment) OS=Cucumis sativus PE=2 SV... [more]
PER48_ARATH1.978e-3143.86Putative Peroxidase 48 OS=Arabidopsis thaliana GN=... [more]
PER72_ARATH1.983e-3146.36Peroxidase 72 OS=Arabidopsis thaliana GN=PER72 PE=... [more]

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Properties
Property NameValue
Genbank descriptionC34105F04EF PostHarvP1 Citrus clementina cDNA clone C34105F04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931485 ID=FC931485; Name=FC931485; organism=Citrus clementina; type=EST; length=754bp
GAACCCAAAGCGAGGTAATCAACAATGGCAACTGCTTCAGCTTCTTCTTT
CATTTCTCTTCTTTTGATATCTTCTCTTTTGCTTGCTTCTTTCACTGAGG
CACAAAAGCCCCCAGTAGCGAAAGGTCTCTCATGGACTTTTTATGACCAG
AGCTGTCCCAAGCTTGAATCCATTGTCAGAAAACAGATCCAAAATGCCCT
GAAAAAAGATATCGGCCTAGCTGCTGGCTTGATTCGCATCCATTTCCACG
ATTGCTTCGTTCAGGGATGTGATGGATCAGTGTTGCTAGAGGGATCAACT
AGTGAGCAAAATGCACGTCCAAACCTAAGCTTAAGGAAGGAGGCTTTAAA
ATTTGTAGACGATCTTCGTGCTCGTGTTCACAAGGAGTGTGGCAGAGTTG
TTTCTTGTGCTGATATTCTTGCCCTTGCTGCTCGCGATTCTGTTGCCTTG
TCTGGAGGGCAAATTACGACCTACCATTGGGAAGGCGAGACAGCAAAACA
TTCGCAACAGTGGTAAATCTGCCATCACCGTTCAGCAACACCACCGTGAT
CCTCAACGATTTCCGAGAAAAAACCTTCAACGCCAGGGAAACCGTGGCCC
TCTCCGGCGGGCACACCGTTGGGCTAGCTCACTGCCCTGCATTCACCAAT
CGCCTCTATCCCAACAAGACCCCACACTGGACAAACATTCGCCAACATCT
CAAAAGACATGCCCACTTCGGATTCCAACACACACGTCTTCGACATCGGT
CCCG
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