FC931485

Overview
NameFC931485
Unique NameFC931485
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length754
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC931485 vs. ExPASy Swiss-Prot
Match: PER1A_ARMRU (Peroxidase C1A OS=Armoracia rusticana GN=PRXC1A PE=1 SV=2)

HSP 1 Score: 108.997 bits (271), Expect = 3.361e-31
Identity = 53/113 (46.90%), Postives = 73/113 (64.60%), Query Frame = 1
Query:  127 LSWTFYDQSCPKLESIVRKQIQNALKKDIGLAAGLIRIHFHDCFVQGCDGSVLLEGSTSEQNARPNLSLRKEALKF--VDDLRARVHKECGRVVSCADILALAARDSVALSGG 459
            L+ TFYD SCP + +IVR  I N L+ D  +AA ++R+HFHDCFV GCD S+LL+ +TS +  +        A  F  +D ++A V   C R VSCAD+L +AA+ SV L+GG
Sbjct:   32 LTPTFYDNSCPNVSNIVRDTIVNELRSDPRIAASILRLHFHDCFVNGCDASILLDNTTSFRTEKDAFGNANSARGFPVIDRMKAAVESACPRTVSCADLLTIAAQQSVTLAGG 144          

HSP 2 Score: 47.3654 bits (111), Expect = 3.361e-31
Identity = 29/70 (41.43%), Postives = 40/70 (57.14%), Query Frame = 3
Query:  462 NYDLPLGRRDS-KTFATVVN--LPSPFSNTTVILNDFREKTFN-ARETVALSGGHTVGLAHCPAFTNRLY 659
            ++ +PLGRRDS + F  + N  LP+PF     + + FR    N + + VALSGGHT G   C    +RLY
Sbjct:  146 SWRVPLGRRDSLQAFLDLANANLPAPFFTLPQLKDSFRNVGLNRSSDLVALSGGHTFGKNQCRFIMDRLY 215          
BLAST of FC931485 vs. ExPASy Swiss-Prot
Match: PERN1_TOBAC (Peroxidase N1 OS=Nicotiana tabacum GN=poxN1 PE=1 SV=1)

HSP 1 Score: 110.923 bits (276), Expect = 3.364e-31
Identity = 53/115 (46.09%), Postives = 77/115 (66.96%), Query Frame = 1
Query:  115 VAKGLSWTFYDQSCPKLESIVRKQIQNALKKDIGLAAGLIRIHFHDCFVQGCDGSVLLEGSTSEQNARPNLSLRKEALKFVDDLRARVHKECGRVVSCADILALAARDSVALSGG 459
            + +G    FY  +CP+ ESIV+  ++   + D  +A G++R+HFHDCFV GCDGS+L+EGS +E+ A PN +L+      ++D + ++   C  VVSCADILALAARDSV  + G
Sbjct:   28 LGQGTRVGFYSSTCPRAESIVQSTVRAHFQSDPTVAPGILRMHFHDCFVLGCDGSILIEGSDAERTAIPNRNLK--GFDVIEDAKTQIEAICPGVVSCADILALAARDSVVATRG 140          

HSP 2 Score: 45.4394 bits (106), Expect = 3.364e-31
Identity = 23/67 (34.33%), Postives = 36/67 (53.73%), Query Frame = 3
Query:  465 YDLPLGRRDSKTF--ATVVNLPSPFSNTTVILNDFREKTFNARETVALSGGHTVGLAHCPAFTNRLY 659
            + +P GRRD +    A   +LP+ F +  +    F  K  N ++ VAL+G HT+G A C    +RL+
Sbjct:  143 WSVPTGRRDGRVSRAADAGDLPAFFDSVDIQKRKFLTKGLNTQDLVALTGAHTIGTAGCAVIRDRLF 209          
BLAST of FC931485 vs. ExPASy Swiss-Prot
Match: PERP7_BRARA (Peroxidase P7 OS=Brassica rapa PE=1 SV=3)

HSP 1 Score: 104.76 bits (260), Expect = 3.371e-31
Identity = 53/114 (46.49%), Postives = 74/114 (64.91%), Query Frame = 1
Query:  127 LSWTFYDQSCPKLESIVRKQIQNALKKDIGLAAGLIRIHFHDCFVQGCDGSVLLEGS---TSEQNARPNLSLRKEALKFVDDLRARVHKECGRVVSCADILALAARDSVALSGG 459
            L+  FY  SCP L S V+  +++A+     + A ++R+ FHDCFV GCDGS+LL+ +   T EQNA PN +  +     ++D+++ V K C  VVSCADILA+AARDSV   GG
Sbjct:    2 LTTNFYSTSCPNLLSTVKSGVKSAVSSQPRMGASILRLFFHDCFVNGCDGSILLDDTSSFTGEQNAGPNRNSAR-GFTVINDIKSAVEKACPGVVSCADILAIAARDSVVQLGG 114          

HSP 2 Score: 51.6026 bits (122), Expect = 3.371e-31
Identity = 24/69 (34.78%), Postives = 42/69 (60.87%), Query Frame = 3
Query:  462 NYDLPLGRRDSKTFATVV---NLPSPFSNTTVILNDFREKTFNARETVALSGGHTVGLAHCPAFTNRLY 659
            N+++ +GRRD+KT +      N+P+P  + + +++ F     + R+ VALSG HT+G + C  F  R+Y
Sbjct:  116 NWNVKVGRRDAKTASQAAANSNIPAPSMSLSQLISSFSAVGLSTRDMVALSGAHTIGQSRCVNFRARVY 184          
BLAST of FC931485 vs. ExPASy Swiss-Prot
Match: PER70_ARATH (Peroxidase 70 OS=Arabidopsis thaliana GN=PER70 PE=2 SV=1)

HSP 1 Score: 107.457 bits (267), Expect = 4.381e-31
Identity = 54/107 (50.47%), Postives = 72/107 (67.29%), Query Frame = 1
Query:  139 FYDQSCPKLESIVRKQIQNALKKDIGLAAGLIRIHFHDCFVQGCDGSVLLEGSTSEQNARPNLSLRKEALKFVDDLRARVHKECGRVVSCADILALAARDSVALSGG 459
            +Y  +C  +ESIVR  +++    +   A G++R+HFHDCFVQGCD SVLL G  SE+ A PNLSLR      +++ + ++   C R VSCADILALAARD V L+GG
Sbjct:   38 YYGSACWNVESIVRSVVESNYLANPANAPGILRMHFHDCFVQGCDASVLLAGPNSERTAIPNLSLR--GFNVIEEAKTQLEIACPRTVSCADILALAARDFVHLAGG 142          

HSP 2 Score: 48.521 bits (114), Expect = 4.381e-31
Identity = 25/66 (37.88%), Postives = 37/66 (56.06%), Query Frame = 3
Query:  465 YDLPLGRRDSK-TFATVVNLPSPFSNTTVILNDFREKTFNARETVALSGGHTVGLAHCPAFTNRLY 659
            + +PLGR D + + A+ V LP P  +  V    F EK  N ++ V L+ GHT+G A C  F +R +
Sbjct:  145 WPVPLGRLDGRISLASNVILPGPTDSVAVQKLRFAEKNLNTQDLVVLAAGHTIGTAGCIVFRDRFF 210          
BLAST of FC931485 vs. ExPASy Swiss-Prot
Match: PER66_ARATH (Peroxidase 66 OS=Arabidopsis thaliana GN=PER66 PE=2 SV=1)

HSP 1 Score: 106.686 bits (265), Expect = 5.707e-31
Identity = 52/119 (43.70%), Postives = 78/119 (65.55%), Query Frame = 1
Query:  112 PVAKGLSWTFYDQSCPKLESIVRKQIQNALKKDIGLAAGLIRIHFHDCFVQGCDGSVLLEGSTS---EQNARPNLSLRKEALKFVDDLRARVHKECGRVVSCADILALAARDSVALSGG 459
            P    L   +YDQSCP  E I+ + ++NA   D  + A L+R+ FHDCF++GCD S+LL+ + S   E++  PN+S+R  +   ++D + ++ K C R VSCAD++A+AARD V LSGG
Sbjct:   21 PSEAALDAHYYDQSCPAAEKIILETVRNATLYDPKVPARLLRMFFHDCFIRGCDASILLDSTRSNQAEKDGPPNISVR--SFYVIEDAKRKLEKACPRTVSCADVIAIAARDVVTLSGG 137          

HSP 2 Score: 48.9062 bits (115), Expect = 5.707e-31
Identity = 19/47 (40.43%), Postives = 30/47 (63.83%), Query Frame = 3
Query:  516 NLPSPFSNTTVILNDFREKTFNARETVALSGGHTVGLAHCPAFTNRL 656
            NLP P  N + ++  F  +  + ++ V LSGGHT+G +HC +F +RL
Sbjct:  159 NLPPPTFNVSQLIQSFAARGLSVKDMVTLSGGHTIGFSHCSSFESRL 205          
BLAST of FC931485 vs. ExPASy Swiss-Prot
Match: PER53_ARATH (Peroxidase 53 OS=Arabidopsis thaliana GN=PER53 PE=1 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 7.427e-31
Identity = 54/114 (47.37%), Postives = 76/114 (66.67%), Query Frame = 1
Query:  127 LSWTFYDQSCPKLESIVRKQIQNALKKDIGLAAGLIRIHFHDCFVQGCDGSVLLEGS---TSEQNARPNLSLRKEALKFVDDLRARVHKECGRVVSCADILALAARDSVALSGG 459
            L+ TFY  +CP   +IVR  IQ AL+ D  + A LIR+HFHDCFV GCD S+LL+ +    SE+NA PN++  +     VD+++  +   C  VVSC+D+LALA+  SV+L+GG
Sbjct:   32 LNATFYSGTCPNASAIVRSTIQQALQSDTRIGASLIRLHFHDCFVNGCDASILLDDTGSIQSEKNAGPNVNSAR-GFNVVDNIKTALENACPGVVSCSDVLALASEASVSLAGG 144          

HSP 2 Score: 46.9802 bits (110), Expect = 7.427e-31
Identity = 27/64 (42.19%), Postives = 33/64 (51.56%), Query Frame = 3
Query:  477 LGRRDSKTFATV---VNLPSPFSNTTVILNDFREKTFNARETVALSGGHTVGLAHCPAFTNRLY 659
            LGRRDS T        ++PSP  + + I   F     N  + VALSG HT G A C  F NRL+
Sbjct:  151 LGRRDSLTANLAGANSSIPSPIESLSNITFKFSAVGLNTNDLVALSGAHTFGRARCGVFNNRLF 214          
BLAST of FC931485 vs. ExPASy Swiss-Prot
Match: PER70_MAIZE (Peroxidase 70 OS=Zea mays GN=PER70 PE=1 SV=1)

HSP 1 Score: 108.612 bits (270), Expect = 7.432e-31
Identity = 58/115 (50.43%), Postives = 78/115 (67.83%), Query Frame = 1
Query:  127 LSWTFYDQSCPKLESIVRKQIQNALKKDIGLAAGLIRIHFHDCFVQGCDGSVLLEGS---TSEQNARPNL-SLRKEALKFVDDLRARVHKECGRVVSCADILALAARDSVALSGG 459
            LS TFY +SCP+  + ++  +  A+ ++  + A L+R+HFHDCFVQGCDGSVLL  +   T EQ A PN+ S+R      VD+++A+V   C  VVSCADILA+AARDSV   GG
Sbjct:   27 LSPTFYSRSCPRALATIKAAVTAAVAQEARMGASLLRLHFHDCFVQGCDGSVLLNDTATFTGEQTANPNVGSIR--GFGVVDNIKAQVEAVCPGVVSCADILAVAARDSVVALGG 139          

HSP 2 Score: 46.595 bits (109), Expect = 7.432e-31
Identity = 25/64 (39.06%), Postives = 36/64 (56.25%), Query Frame = 3
Query:  477 LGRRDSKTFATVV---NLPSPFSNTTVILNDFREKTFNARETVALSGGHTVGLAHCPAFTNRLY 659
            LGRRDS T +  +   +LP+P  +   +   F +K  +  + VALSG HT+GLA C  F   +Y
Sbjct:  146 LGRRDSTTASLALANSDLPAPSLDLANLTAAFAKKRLSRTDLVALSGAHTIGLAQCKNFRAHIY 209          
BLAST of FC931485 vs. ExPASy Swiss-Prot
Match: PER57_ARATH (Peroxidase 57 OS=Arabidopsis thaliana GN=PER57 PE=1 SV=1)

HSP 1 Score: 107.457 bits (267), Expect = 9.683e-31
Identity = 51/107 (47.66%), Postives = 73/107 (68.22%), Query Frame = 1
Query:  139 FYDQSCPKLESIVRKQIQNALKKDIGLAAGLIRIHFHDCFVQGCDGSVLLEGSTSEQNARPNLSLRKEALKFVDDLRARVHKECGRVVSCADILALAARDSVALSGG 459
            FY QSCP+ E+IVR  ++        + A L+R+HFHDCFV+GCD S+L++ + SE+ A PN S+R+     +D ++A++   C   VSCADI+ LA RDSVAL+GG
Sbjct:   28 FYSQSCPQAETIVRNLVRQRFGVTPTVTAALLRMHFHDCFVKGCDASLLIDSTNSEKTAGPNGSVRE--FDLIDRIKAQLEAACPSTVSCADIVTLATRDSVALAGG 132          

HSP 2 Score: 47.3654 bits (111), Expect = 9.683e-31
Identity = 24/66 (36.36%), Postives = 37/66 (56.06%), Query Frame = 3
Query:  462 NYDLPLGRRDSKTFATV-VNLPSPFSNTTVILNDFREKTFNARETVALSGGHTVGLAHCPAFTNRL 656
            +Y +P GRRD +    + V LP P  + +  ++ F  K  N  + VAL G HTVG  +C  F++R+
Sbjct:  134 SYSIPTGRRDGRVSNNLDVTLPGPTISVSGAVSLFTNKGMNTFDAVALLGAHTVGQGNCGLFSDRI 199          
BLAST of FC931485 vs. ExPASy Swiss-Prot
Match: PER34_ARATH (Peroxidase 34 OS=Arabidopsis thaliana GN=PER34 PE=1 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 1.258e-30
Identity = 54/116 (46.55%), Postives = 77/116 (66.38%), Query Frame = 1
Query:  118 AKGLSWTFYDQSCPKLESIVRKQIQNALKKDIGLAAGLIRIHFHDCFVQGCDGSVLLEGSTSEQNARPNLSLRKEALKF--VDDLRARVHKECGRVVSCADILALAARDSVALSGG 459
            A  L+ TFYD+SCP + +IVR+ I N L+ D  +AA ++R+HFHDCFV GCD S+LL+ +TS +  +        A  F  +D ++A V + C R VSCAD+L +AA+ SV L+GG
Sbjct:   29 AAQLTPTFYDRSCPNVTNIVRETIVNELRSDPRIAASILRLHFHDCFVNGCDASILLDNTTSFRTEKDAFGNANSARGFPVIDRMKAAVERACPRTVSCADMLTIAAQQSVTLAGG 144          

HSP 2 Score: 43.8986 bits (102), Expect = 1.258e-30
Identity = 28/70 (40.00%), Postives = 38/70 (54.29%), Query Frame = 3
Query:  462 NYDLPLGRRDS-KTFATVVN--LPSPFSNTTVILNDFREKTFNA-RETVALSGGHTVGLAHCPAFTNRLY 659
            ++ +PLGRRDS + F  + N  LP+PF     +   FR    +   + VALSGGHT G   C    +RLY
Sbjct:  146 SWRVPLGRRDSLQAFLELANANLPAPFFTLPQLKASFRNVGLDRPSDLVALSGGHTFGKNQCQFILDRLY 215          
BLAST of FC931485 vs. ExPASy Swiss-Prot
Match: PER23_ARATH (Peroxidase 23 OS=Arabidopsis thaliana GN=PER23 PE=2 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 1.258e-30
Identity = 50/110 (45.45%), Postives = 74/110 (67.27%), Query Frame = 1
Query:  139 FYDQSCPKLESIVRKQIQNALKKDIGLAAGLIRIHFHDCFVQGCDGSVLLEGSTS---EQNARPNLSLRKEALKFVDDLRARVHKECGRVVSCADILALAARDSVALSGG 459
            FY ++CP + +I+   I N L+ D  +AA L+R+HFHDCFV+GCD S+LL+ STS   E++A PN +        +D ++A + + C R VSCADI+ +A++ SV LSGG
Sbjct:   35 FYFRTCPPIFNIIGDTIVNELRTDPRIAASLLRLHFHDCFVRGCDASILLDNSTSFRTEKDAAPNKN-SVRGFDVIDRMKAAIERACPRTVSCADIITIASQISVLLSGG 143          

HSP 2 Score: 53.1434 bits (126), Expect = 1.258e-30
Identity = 33/69 (47.83%), Postives = 40/69 (57.97%), Query Frame = 3
Query:  465 YDLPLGRRDS-KTFATVVN--LPSPFSNTTVILNDFREKTFNA-RETVALSGGHTVGLAHCPAFTNRLY 659
            + +PLGRRDS + F  + N  LPSPFS  T +   F +   N   + VALSGGHT G A C   T RLY
Sbjct:  146 WPVPLGRRDSVEAFFALANTALPSPFSTLTQLKTAFADVGLNRPSDLVALSGGHTFGKAQCQFVTPRLY 214          
The following BLAST results are available for this feature:
BLAST of FC931485 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 108
Match NameE-valueIdentityDescription
PER1A_ARMRU3.361e-3146.90Peroxidase C1A OS=Armoracia rusticana GN=PRXC1A PE... [more]
PERN1_TOBAC3.364e-3146.09Peroxidase N1 OS=Nicotiana tabacum GN=poxN1 PE=1 S... [more]
PERP7_BRARA3.371e-3146.49Peroxidase P7 OS=Brassica rapa PE=1 SV=3[more]
PER70_ARATH4.381e-3150.47Peroxidase 70 OS=Arabidopsis thaliana GN=PER70 PE=... [more]
PER66_ARATH5.707e-3143.70Peroxidase 66 OS=Arabidopsis thaliana GN=PER66 PE=... [more]
PER53_ARATH7.427e-3147.37Peroxidase 53 OS=Arabidopsis thaliana GN=PER53 PE=... [more]
PER70_MAIZE7.432e-3150.43Peroxidase 70 OS=Zea mays GN=PER70 PE=1 SV=1[more]
PER57_ARATH9.683e-3147.66Peroxidase 57 OS=Arabidopsis thaliana GN=PER57 PE=... [more]
PER34_ARATH1.258e-3046.55Peroxidase 34 OS=Arabidopsis thaliana GN=PER34 PE=... [more]
PER23_ARATH1.258e-3045.45Peroxidase 23 OS=Arabidopsis thaliana GN=PER23 PE=... [more]

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Properties
Property NameValue
Genbank descriptionC34105F04EF PostHarvP1 Citrus clementina cDNA clone C34105F04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931485 ID=FC931485; Name=FC931485; organism=Citrus clementina; type=EST; length=754bp
GAACCCAAAGCGAGGTAATCAACAATGGCAACTGCTTCAGCTTCTTCTTT
CATTTCTCTTCTTTTGATATCTTCTCTTTTGCTTGCTTCTTTCACTGAGG
CACAAAAGCCCCCAGTAGCGAAAGGTCTCTCATGGACTTTTTATGACCAG
AGCTGTCCCAAGCTTGAATCCATTGTCAGAAAACAGATCCAAAATGCCCT
GAAAAAAGATATCGGCCTAGCTGCTGGCTTGATTCGCATCCATTTCCACG
ATTGCTTCGTTCAGGGATGTGATGGATCAGTGTTGCTAGAGGGATCAACT
AGTGAGCAAAATGCACGTCCAAACCTAAGCTTAAGGAAGGAGGCTTTAAA
ATTTGTAGACGATCTTCGTGCTCGTGTTCACAAGGAGTGTGGCAGAGTTG
TTTCTTGTGCTGATATTCTTGCCCTTGCTGCTCGCGATTCTGTTGCCTTG
TCTGGAGGGCAAATTACGACCTACCATTGGGAAGGCGAGACAGCAAAACA
TTCGCAACAGTGGTAAATCTGCCATCACCGTTCAGCAACACCACCGTGAT
CCTCAACGATTTCCGAGAAAAAACCTTCAACGCCAGGGAAACCGTGGCCC
TCTCCGGCGGGCACACCGTTGGGCTAGCTCACTGCCCTGCATTCACCAAT
CGCCTCTATCCCAACAAGACCCCACACTGGACAAACATTCGCCAACATCT
CAAAAGACATGCCCACTTCGGATTCCAACACACACGTCTTCGACATCGGT
CCCG
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