FC931485

Overview
NameFC931485
Unique NameFC931485
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length754
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC931485 vs. ExPASy Swiss-Prot
Match: PER44_ARATH (Peroxidase 44 OS=Arabidopsis thaliana GN=PER44 PE=2 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 1.357e-29
Identity = 52/120 (43.33%), Postives = 74/120 (61.67%), Query Frame = 1
Query:  109 PPVAKGLSWTFYDQSCPKLESIVRKQIQNALKKDIGLAAGLIRIHFHDCFVQGCDGSVLLE---GSTSEQNARPNLSLRKEALKFVDDLRARVHKECGRVVSCADILALAARDSVALSGG 459
            P     L   FY +SCP+ ESIV   + N  + D  + A  +R+ FHDCFV+GCD S+L++   G  SE++  PN S+R    + +D+ + ++   C R VSCADI+ LA RDSVAL+GG
Sbjct:   16 PSALAQLRTGFYSRSCPRAESIVASVVANRFRSDKSITAAFLRMQFHDCFVRGCDASLLIDPRPGRPSEKSTGPNASVR--GYEIIDEAKRQLEAACPRTVSCADIVTLATRDSVALAGG 133          

HSP 2 Score: 45.8246 bits (107), Expect = 1.357e-29
Identity = 25/66 (37.88%), Postives = 36/66 (54.55%), Query Frame = 3
Query:  465 YDLPLGRRDS-KTFATVVNLPSPFSNTTVILNDFREKTFNARETVAL-SGGHTVGLAHCPAFTNRL 656
            + +P GRRD  ++    VNLP P    +  +  F  +  N  + V L  GGH+VG+AHC  F +RL
Sbjct:  136 FSVPTGRRDGLRSNPNDVNLPGPTIPVSASIQLFAAQGMNTNDMVTLIGGGHSVGVAHCSLFQDRL 201          
BLAST of FC931485 vs. ExPASy Swiss-Prot
Match: PER37_ARATH (Peroxidase 37 OS=Arabidopsis thaliana GN=PER37 PE=2 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 1.763e-29
Identity = 52/113 (46.02%), Postives = 76/113 (67.26%), Query Frame = 1
Query:  127 LSWTFYDQSCPKLESIVRKQIQNALKKDIGLAAGLIRIHFHDCFVQGCDGSVLLEGSTSEQNARPNLSLRKEALKF--VDDLRARVHKECGRVVSCADILALAARDSVALSGG 459
            LS +FYD++CP++  I    I NAL+ D  +AA ++R+HFHDCFV GCD S+LL+ +TS +  +        A  F  +D ++A V K C + VSCAD+LA+AA++SV L+GG
Sbjct:   24 LSPSFYDKTCPQVFDIATTTIVNALRSDPRIAASILRLHFHDCFVNGCDASILLDNTTSFRTEKDAFGNANSARGFDVIDKMKAAVEKACPKTVSCADLLAIAAQESVVLAGG 136          

HSP 2 Score: 42.3578 bits (98), Expect = 1.763e-29
Identity = 27/70 (38.57%), Postives = 39/70 (55.71%), Query Frame = 3
Query:  462 NYDLPLGRRDS-KTFATVVN--LPSPFSNTTVILNDFREKTFN-ARETVALSGGHTVGLAHCPAFTNRLY 659
            ++ +P GRRDS + F  + N  LP+PF     + + F+    + A + VALSGGHT G   C    +RLY
Sbjct:  138 SWRVPNGRRDSLRGFMDLANDNLPAPFFTLNQLKDRFKNVGLDRASDLVALSGGHTFGKNQCQFIMDRLY 207          
BLAST of FC931485 vs. ExPASy Swiss-Prot
Match: PER2_ARMRU (Peroxidase C2 OS=Armoracia rusticana GN=PRXC2 PE=3 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 1.763e-29
Identity = 51/113 (45.13%), Postives = 76/113 (67.26%), Query Frame = 1
Query:  127 LSWTFYDQSCPKLESIVRKQIQNALKKDIGLAAGLIRIHFHDCFVQGCDGSVLLEGSTSEQNARPNLSLRKEALKF--VDDLRARVHKECGRVVSCADILALAARDSVALSGG 459
            LS +FYD++CP++  I    I+ AL+ D  +AA ++R+HFHDCFV GCD S+LL+ +TS +  +      + A  F  +D ++A V K C + VSCAD+LA+AA+ SV L+GG
Sbjct:   26 LSPSFYDKTCPQVFDIATNTIKTALRSDPRIAASILRLHFHDCFVNGCDASILLDNTTSFRTEKDAFGNARSARGFDVIDTMKAAVEKACPKTVSCADLLAIAAQKSVVLAGG 138          

HSP 2 Score: 43.5134 bits (101), Expect = 1.763e-29
Identity = 28/70 (40.00%), Postives = 38/70 (54.29%), Query Frame = 3
Query:  462 NYDLPLGRRDS-KTFATVVN--LPSPFSNTTVILNDFREKTFNA-RETVALSGGHTVGLAHCPAFTNRLY 659
            ++ +P GRRDS + F  + N  LP P S   V+ + FR    +   + VALSGGHT G   C    +RLY
Sbjct:  140 SWKVPSGRRDSLRGFMDLANDNLPGPSSTLQVLKDKFRNVGLDRPSDLVALSGGHTFGKNQCQFIMDRLY 209          
BLAST of FC931485 vs. ExPASy Swiss-Prot
Match: PER20_ARATH (Peroxidase 20 OS=Arabidopsis thaliana GN=PER20 PE=2 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 3.893e-29
Identity = 60/120 (50.00%), Postives = 77/120 (64.17%), Query Frame = 1
Query:  112 PVAKGLSWTFYDQSCPKLESIVRKQIQNALKKDIGLAAGLIRIHFHDCFVQGCDGSVLLE---GSTSEQNARPNL-SLRKEALKFVDDLRARVHKECGRVVSCADILALAARDSVALSGG 459
            P+ KG    FY +SCP  E IV+  I+ A+ KD  +AA L+R+ FHDCFV GCD SVLL+      SE+ A PNL SLR    + +D ++  + + C   VSC+DILALAARDSV L GG
Sbjct:   29 PLLKG----FYKESCPLAEEIVKHNIEVAVLKDPRMAASLLRLQFHDCFVLGCDASVLLDTHGDMLSEKQATPNLNSLR--GFEVIDYIKYLLEEACPLTVSCSDILALAARDSVFLRGG 142          

HSP 2 Score: 47.7506 bits (112), Expect = 3.893e-29
Identity = 30/89 (33.71%), Postives = 51/89 (57.30%), Query Frame = 3
Query:  465 YDLPLGRRDS--KTFATVVN-LPSPFSNTTVILNDFREKTFNARETVALSGGHTVGLAHCPAFTNRL-YPNKTPHWTNIRQHLKRHAHF 719
            +++ LGRRDS   +FA     +P+P S+   ++ +F+++  N ++ +ALSG HT+G A C +F  R+  PN     T      +RH+ F
Sbjct:  145 WEVLLGRRDSLKASFAGANQFIPAPNSSLDSLIINFKQQGLNIQDLIALSGAHTIGKARCVSFKQRIVQPNM--EQTFYVDEFRRHSTF 231          
BLAST of FC931485 vs. ExPASy Swiss-Prot
Match: PER25_ARATH (Peroxidase 25 OS=Arabidopsis thaliana GN=PER25 PE=2 SV=2)

HSP 1 Score: 128.257 bits (321), Expect = 4.584e-29
Identity = 63/107 (58.88%), Postives = 79/107 (73.83%), Query Frame = 1
Query:  139 FYDQSCPKLESIVRKQIQNALKKDIGLAAGLIRIHFHDCFVQGCDGSVLLEGSTSEQNARPNLSLRKEALKFVDDLRARVHKECGRVVSCADILALAARDSVALSGG 459
            +Y  SCPK ESIVR  +++    D  ++ GL+R+HFHDCFVQGCDGSVL++G ++EQ A PNL LR   L+ +DD +AR+   C  VVSCADILALAARDSV LS G
Sbjct:   33 YYSTSCPKAESIVRSTVESHFDSDPTISPGLLRLHFHDCFVQGCDGSVLIKGKSAEQAALPNLGLR--GLEVIDDAKARLEAVCPGVVSCADILALAARDSVDLSDG 137          
BLAST of FC931485 vs. ExPASy Swiss-Prot
Match: PER33_ARATH (Peroxidase 33 OS=Arabidopsis thaliana GN=PER33 PE=1 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 5.065e-29
Identity = 53/113 (46.90%), Postives = 74/113 (65.49%), Query Frame = 1
Query:  127 LSWTFYDQSCPKLESIVRKQIQNALKKDIGLAAGLIRIHFHDCFVQGCDGSVLLEGSTSEQNARPNLSLRKEALKF--VDDLRARVHKECGRVVSCADILALAARDSVALSGG 459
            L+ TFYD SCP + +IVR  I N L+ D  +A  ++R+HFHDCFV GCD S+LL+ +TS +  +  L     A  F  +D ++A V + C R VSCAD+L +AA+ SV L+GG
Sbjct:   33 LTPTFYDTSCPTVTNIVRDTIVNELRSDPRIAGSILRLHFHDCFVNGCDASILLDNTTSFRTEKDALGNANSARGFPVIDRMKAAVERACPRTVSCADMLTIAAQQSVTLAGG 145          

HSP 2 Score: 40.817 bits (94), Expect = 5.065e-29
Identity = 26/70 (37.14%), Postives = 38/70 (54.29%), Query Frame = 3
Query:  462 NYDLPLGRRDS-KTFATVVN--LPSPFSNTTVILNDFREKTFNA-RETVALSGGHTVGLAHCPAFTNRLY 659
            ++ +PLGRRDS + F  + N  LP+PF     +  +F+    +   + VALSG HT G   C    +RLY
Sbjct:  147 SWKVPLGRRDSLQAFLDLANANLPAPFFTLPQLKANFKNVGLDRPSDLVALSGAHTFGKNQCRFIMDRLY 216          
BLAST of FC931485 vs. ExPASy Swiss-Prot
Match: PER1B_ARMRU (Peroxidase C1B OS=Armoracia rusticana GN=PRXC1B PE=3 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 5.065e-29
Identity = 54/113 (47.79%), Postives = 73/113 (64.60%), Query Frame = 1
Query:  127 LSWTFYDQSCPKLESIVRKQIQNALKKDIGLAAGLIRIHFHDCFVQGCDGSVLLEGSTSEQNARPNLSLRKEALKF--VDDLRARVHKECGRVVSCADILALAARDSVALSGG 459
            L+ TFYD SCP + +IVR  I N L+ D  + A ++R+HFHDCFV GCD S+LL+ +TS    +  L     A  F  VD ++A V + C R VSCAD+L +AA+ SV L+GG
Sbjct:   30 LTPTFYDTSCPNVSNIVRDIIINELRSDPRITASILRLHFHDCFVNGCDASILLDNTTSFLTEKDALGNANSARGFPTVDRIKAAVERACPRTVSCADVLTIAAQQSVNLAGG 142          

HSP 2 Score: 41.9726 bits (97), Expect = 5.065e-29
Identity = 27/70 (38.57%), Postives = 39/70 (55.71%), Query Frame = 3
Query:  462 NYDLPLGRRDS-KTFATVVN--LPSPFSNTTVILNDFREKTFNA-RETVALSGGHTVGLAHCPAFTNRLY 659
            ++ +PLGRRDS + F  + N  LP+PF     + + F +   +   + VALSGGHT G   C    +RLY
Sbjct:  144 SWRVPLGRRDSLQAFLDLANANLPAPFFTLPQLKDAFAKVGLDRPSDLVALSGGHTFGKNQCRFIMDRLY 213          
BLAST of FC931485 vs. ExPASy Swiss-Prot
Match: PER1C_ARMRU (Peroxidase C1C (Fragment) OS=Armoracia rusticana GN=PRXC1C PE=3 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 5.071e-29
Identity = 54/113 (47.79%), Postives = 74/113 (65.49%), Query Frame = 1
Query:  127 LSWTFYDQSCPKLESIVRKQIQNALKKDIGLAAGLIRIHFHDCFVQGCDGSVLLEGSTSEQNARPNLSLRKEALKF--VDDLRARVHKECGRVVSCADILALAARDSVALSGG 459
            L+ TFYD SCP + +IVR  I N L+ D  +AA ++R+HFHDCFV GCD S+LL+ +TS +  +        A  F  VD ++A V + C R VSCAD+L +AA+ SV L+GG
Sbjct:   11 LTPTFYDNSCPNVSNIVRDIIINELRSDPSIAASILRLHFHDCFVNGCDASILLDNTTSFRTEKDAFGNANSARGFPVVDRIKAAVERACPRTVSCADVLTIAAQQSVNLAGG 123          

HSP 2 Score: 39.6614 bits (91), Expect = 5.071e-29
Identity = 27/70 (38.57%), Postives = 36/70 (51.43%), Query Frame = 3
Query:  462 NYDLPLGRRDSK-TFATVVN--LPSPFSNTTVILNDFREKTFNA-RETVALSGGHTVGLAHCPAFTNRLY 659
            ++ +PLGRRDS+  F  + N  LP+P      +   F     N   + VALSGGHT G   C    +RLY
Sbjct:  125 SWRVPLGRRDSRQAFLDLANANLPAPSFTLPELKAAFANVGLNRPSDLVALSGGHTFGKNQCRFIMDRLY 194          
BLAST of FC931485 vs. ExPASy Swiss-Prot
Match: PER24_ARATH (Peroxidase 24 OS=Arabidopsis thaliana GN=PER24 PE=2 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 3.212e-28
Identity = 51/111 (45.95%), Postives = 72/111 (64.86%), Query Frame = 1
Query:  127 LSWTFYDQSCPKLESIVRKQIQNALKKDIGLAAGLIRIHFHDCFVQGCDGSVLLEG----STSEQNARPNLSLRKEALKFVDDLRARVHKECGRVVSCADILALAARDSVA 447
            L   FY  SCP  E IVR+ +   ++ +  LA  L+R+H+HDCFV+GCD S+LL+     + SE+ ARPNLSL     + +D+++  + K C   VSCADIL LAARD+V+
Sbjct:   46 LKMNFYHNSCPGAEDIVRQIVWKKVEANRSLAPKLLRVHYHDCFVRGCDASLLLDSVAGKAVSEKEARPNLSL--SGFEIIDEIKYILEKRCPNTVSCADILTLAARDAVS 154          

HSP 2 Score: 44.669 bits (104), Expect = 3.212e-28
Identity = 21/47 (44.68%), Postives = 28/47 (59.57%), Query Frame = 3
Query:  516 NLPSPFSNTTVILNDFREKTFNARETVALSGGHTVGLAHCPAFTNRL 656
            +LPS  +N T +   F E   +  + VALSG HT+G+AHC  F  RL
Sbjct:  182 DLPSAGANFTTLQKLFAESDLDVVDLVALSGAHTIGIAHCGVFGRRL 228          
BLAST of FC931485 vs. ExPASy Swiss-Prot
Match: PERE5_ARMRU (Peroxidase E5 OS=Armoracia rusticana GN=HRPE5 PE=1 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 3.220e-28
Identity = 47/110 (42.73%), Postives = 75/110 (68.18%), Query Frame = 1
Query:  139 FYDQSCPKLESIVRKQIQNALKKDIGLAAGLIRIHFHDCFVQGCDGSVLLEGSTS---EQNARPNLSLRKEALKFVDDLRARVHKECGRVVSCADILALAARDSVALSGG 459
            FY ++CP + +I++  I + L+ D  +AA ++R+HFHDCFV+GCD S+LL+ S S   E++A PN++  +     +D ++  + + C R VSCADIL +A++ SV LSGG
Sbjct:    6 FYSRTCPSVFNIIKNVIVDELQTDPRIAASILRLHFHDCFVRGCDASILLDTSKSFRTEKDAAPNVNSAR-GFNVIDRMKTALERACPRTVSCADILTIASQISVLLSGG 114          

HSP 2 Score: 47.7506 bits (112), Expect = 3.220e-28
Identity = 31/70 (44.29%), Postives = 39/70 (55.71%), Query Frame = 3
Query:  462 NYDLPLGRRDS-KTFATVVN--LPSPFSNTTVILNDFREKTFNA-RETVALSGGHTVGLAHCPAFTNRLY 659
            ++ +PLGRRDS + F  + N  LPSPF     +   F +   N   + VALSGGHT G A C   T RLY
Sbjct:  116 SWAVPLGRRDSVEAFFDLANTALPSPFFTLAQLKKAFADVGLNRPSDLVALSGGHTFGRARCLFVTARLY 185          
The following BLAST results are available for this feature:
BLAST of FC931485 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 108
Match NameE-valueIdentityDescription
PER44_ARATH1.357e-2943.33Peroxidase 44 OS=Arabidopsis thaliana GN=PER44 PE=... [more]
PER37_ARATH1.763e-2946.02Peroxidase 37 OS=Arabidopsis thaliana GN=PER37 PE=... [more]
PER2_ARMRU1.763e-2945.13Peroxidase C2 OS=Armoracia rusticana GN=PRXC2 PE=3... [more]
PER20_ARATH3.893e-2950.00Peroxidase 20 OS=Arabidopsis thaliana GN=PER20 PE=... [more]
PER25_ARATH4.584e-2958.88Peroxidase 25 OS=Arabidopsis thaliana GN=PER25 PE=... [more]
PER33_ARATH5.065e-2946.90Peroxidase 33 OS=Arabidopsis thaliana GN=PER33 PE=... [more]
PER1B_ARMRU5.065e-2947.79Peroxidase C1B OS=Armoracia rusticana GN=PRXC1B PE... [more]
PER1C_ARMRU5.071e-2947.79Peroxidase C1C (Fragment) OS=Armoracia rusticana G... [more]
PER24_ARATH3.212e-2845.95Peroxidase 24 OS=Arabidopsis thaliana GN=PER24 PE=... [more]
PERE5_ARMRU3.220e-2842.73Peroxidase E5 OS=Armoracia rusticana GN=HRPE5 PE=1... [more]

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Properties
Property NameValue
Genbank descriptionC34105F04EF PostHarvP1 Citrus clementina cDNA clone C34105F04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931485 ID=FC931485; Name=FC931485; organism=Citrus clementina; type=EST; length=754bp
GAACCCAAAGCGAGGTAATCAACAATGGCAACTGCTTCAGCTTCTTCTTT
CATTTCTCTTCTTTTGATATCTTCTCTTTTGCTTGCTTCTTTCACTGAGG
CACAAAAGCCCCCAGTAGCGAAAGGTCTCTCATGGACTTTTTATGACCAG
AGCTGTCCCAAGCTTGAATCCATTGTCAGAAAACAGATCCAAAATGCCCT
GAAAAAAGATATCGGCCTAGCTGCTGGCTTGATTCGCATCCATTTCCACG
ATTGCTTCGTTCAGGGATGTGATGGATCAGTGTTGCTAGAGGGATCAACT
AGTGAGCAAAATGCACGTCCAAACCTAAGCTTAAGGAAGGAGGCTTTAAA
ATTTGTAGACGATCTTCGTGCTCGTGTTCACAAGGAGTGTGGCAGAGTTG
TTTCTTGTGCTGATATTCTTGCCCTTGCTGCTCGCGATTCTGTTGCCTTG
TCTGGAGGGCAAATTACGACCTACCATTGGGAAGGCGAGACAGCAAAACA
TTCGCAACAGTGGTAAATCTGCCATCACCGTTCAGCAACACCACCGTGAT
CCTCAACGATTTCCGAGAAAAAACCTTCAACGCCAGGGAAACCGTGGCCC
TCTCCGGCGGGCACACCGTTGGGCTAGCTCACTGCCCTGCATTCACCAAT
CGCCTCTATCCCAACAAGACCCCACACTGGACAAACATTCGCCAACATCT
CAAAAGACATGCCCACTTCGGATTCCAACACACACGTCTTCGACATCGGT
CCCG
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