FC931485

Overview
NameFC931485
Unique NameFC931485
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length754
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC931485 vs. ExPASy Swiss-Prot
Match: PER3_ARMRU (Peroxidase C3 OS=Armoracia rusticana GN=PRXC3 PE=3 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 4.182e-28
Identity = 48/110 (43.64%), Postives = 74/110 (67.27%), Query Frame = 1
Query:  139 FYDQSCPKLESIVRKQIQNALKKDIGLAAGLIRIHFHDCFVQGCDGSVLLEGSTS---EQNARPNLSLRKEALKFVDDLRARVHKECGRVVSCADILALAARDSVALSGG 459
            FY ++CP + +I+   I + L+ D  +AA L+R+HFHDCFV+GCD S+LL+ STS   E++A PN +  +     +D ++  + + C R VSCAD+L +A++ SV LSGG
Sbjct:   35 FYFRTCPSVFNIIGDIIVDELRTDPRIAASLLRLHFHDCFVRGCDASILLDNSTSFRTEKDAAPNANSAR-GFGVIDRMKTSLERACPRTVSCADVLTIASQISVLLSGG 143          

HSP 2 Score: 48.521 bits (114), Expect = 4.182e-28
Identity = 31/69 (44.93%), Postives = 38/69 (55.07%), Query Frame = 3
Query:  465 YDLPLGRRDS-KTFATVVN--LPSPFSNTTVILNDFREKTFNA-RETVALSGGHTVGLAHCPAFTNRLY 659
            + +PLGRRDS + F  + N  LPSPF     +   F +   N   + VALSGGHT G A C   T RLY
Sbjct:  146 WPVPLGRRDSVEAFFDLANTALPSPFFTLAQLKKAFADVGLNRPSDLVALSGGHTFGRAQCQFVTPRLY 214          
BLAST of FC931485 vs. ExPASy Swiss-Prot
Match: PER43_ARATH (Peroxidase 43 OS=Arabidopsis thaliana GN=PER43 PE=2 SV=2)

HSP 1 Score: 101.679 bits (252), Expect = 4.187e-28
Identity = 50/108 (46.30%), Postives = 75/108 (69.44%), Query Frame = 1
Query:  139 FYDQSCPKLESIVRKQIQNALKKDIGLAAGLIRIHFHDCFVQGCDGSVLL-EGSTSEQNARPNLSLRKEALKFVDDLRARVHKECGRVVSCADILALAARDSVALSGG 459
            FY  +CP+ ESIV++ +  A   D  L A L+R+HFHDCFV+GCDGS+L+  G+ SE+NA  +  +R    + V+ ++A +   C  VVSC+DI+ALAARD+++L+ G
Sbjct:   30 FYSNTCPQAESIVKRVVSGAALSDPNLPAILLRLHFHDCFVEGCDGSILVNNGAISEKNAFGHEGVR--GFEIVEAVKAELEAACPGVVSCSDIVALAARDAISLANG 135          

HSP 2 Score: 44.2838 bits (103), Expect = 4.187e-28
Identity = 21/67 (31.34%), Postives = 35/67 (52.24%), Query Frame = 3
Query:  465 YDLPLGRRDSKT--FATVVNLPSPFSNTTVILNDFREKTFNARETVALSGGHTVGLAHCPAFTNRLY 659
            Y++P GRRD +    +   ++P    +  ++   F +K  NA++ V LS  HT+G   C   + RLY
Sbjct:  138 YEVPTGRRDGRVSNMSLAKDMPEVSDSIEILKAKFMQKGLNAKDLVLLSAAHTIGTTACFFMSKRLY 204          
BLAST of FC931485 vs. ExPASy Swiss-Prot
Match: PER22_ARATH (Peroxidase 22 OS=Arabidopsis thaliana GN=PER22 PE=1 SV=2)

HSP 1 Score: 92.0485 bits (227), Expect = 5.444e-28
Identity = 48/110 (43.64%), Postives = 71/110 (64.55%), Query Frame = 1
Query:  139 FYDQSCPKLESIVRKQIQNALKKDIGLAAGLIRIHFHDCFVQGCDGSVLLEGSTS---EQNARPNLSLRKEALKFVDDLRARVHKECGRVVSCADILALAARDSVALSGG 459
            FY  +CP +  I+   I + L+ D  +AA L+R+HFHDCFV+GCD S+LL+ STS   E++A PN +  +     +D ++  + + C   VSCADIL +A++ SV LSGG
Sbjct:   35 FYFGTCPFVFDIIGNIIVDELQTDPRIAASLLRLHFHDCFVRGCDASILLDNSTSFRTEKDAAPNANSAR-GFNVIDRMKVALERACPGRVSCADILTIASQISVLLSGG 143          

HSP 2 Score: 53.5286 bits (127), Expect = 5.444e-28
Identity = 33/69 (47.83%), Postives = 40/69 (57.97%), Query Frame = 3
Query:  465 YDLPLGRRDS-KTFATVVN--LPSPFSNTTVILNDFREKTFN-ARETVALSGGHTVGLAHCPAFTNRLY 659
            + +PLGRRDS + F  + N  LPSPF N T +   F +   N   + VALSGGHT G A C   T RLY
Sbjct:  146 WPVPLGRRDSVEAFFALANTALPSPFFNLTQLKTAFADVGLNRTSDLVALSGGHTFGRAQCQFVTPRLY 214          
BLAST of FC931485 vs. ExPASy Swiss-Prot
Match: PER1_HORVU (Peroxidase 1 OS=Hordeum vulgare PE=2 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 5.454e-28
Identity = 56/112 (50.00%), Postives = 72/112 (64.29%), Query Frame = 1
Query:  127 LSWTFYDQSCPKLESIVRKQIQNALKKDIGLAAGLIRIHFHDCFVQGCDGSVLLEGSTSEQNARPNL-SLRKEALKFVDDLRARVHKECGRVVSCADILALAARDSVALSGG 459
            LS TFYD SCP+  + ++  +  A+  D  + A L+R+HFHDCFVQGCD SVLL G   EQNA PN  SLR      +D ++ ++   C + VSCADIL +AARDSV   GG
Sbjct:   23 LSPTFYDTSCPRALATIKSGVMAAVTSDPRMGASLLRLHFHDCFVQGCDASVLLSG--MEQNAIPNAGSLR--GFGVIDSIKTQIEAICKQTVSCADILTVAARDSVVALGG 130          

HSP 2 Score: 40.4318 bits (93), Expect = 5.454e-28
Identity = 27/74 (36.49%), Postives = 37/74 (50.00%), Query Frame = 3
Query:  462 NYDLPLGRRDS---KTFATVVNLPSPFSNTTVILNDFREKT-FNARETVALSGGHTVGLAHCPAFTNRLYPNKT 671
            ++ +PLGRRDS          +LP   S+   +   F +K   N  + VALSG HT+G A C  F  R+Y   T
Sbjct:  132 SWTVPLGRRDSIDANENEANTDLPGFNSSRAELEAAFLKKGGLNTVDMVALSGAHTIGQAQCSTFRARIYGGDT 205          
BLAST of FC931485 vs. ExPASy Swiss-Prot
Match: PERX_TOBAC (Lignin-forming anionic peroxidase OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 7.096e-28
Identity = 52/113 (46.02%), Postives = 70/113 (61.95%), Query Frame = 1
Query:  127 LSWTFYDQSCPKLESIVRKQIQNALKKDIGLAAGLIRIHFHDCFVQGCDGSVLL--EGSTSEQNARPNLSLRKEALKFVDDLRARVHKECGRVVSCADILALAARDSVALSGG 459
            LS TFYD +CP + SIVR  +    + D    A +IR+HFHDCFV GCDGS+LL  +G+ +E++A  N+         VDD++  +   C  VVSCADILALA+   V L+ G
Sbjct:   24 LSATFYDTTCPNVTSIVRGVMDQRQRTDARAGAKIIRLHFHDCFVNGCDGSILLDTDGTQTEKDAPANVG--AGGFDIVDDIKTALENVCPGVVSCADILALASEIGVVLAKG 134          

HSP 2 Score: 47.3654 bits (111), Expect = 7.096e-28
Identity = 25/69 (36.23%), Postives = 36/69 (52.17%), Query Frame = 3
Query:  462 NYDLPLGRRDSKTF---ATVVNLPSPFSNTTVILNDFREKTFNARETVALSGGHTVGLAHCPAFTNRLY 659
            ++ +  GR+DS T        ++PSPF    V++  F  K  +  + VALSG HT G A C  F  RL+
Sbjct:  136 SWQVLFGRKDSLTANRSGANSDIPSPFETLAVMIPQFTNKGMDLTDLVALSGAHTFGRARCGTFEQRLF 204          
BLAST of FC931485 vs. ExPASy Swiss-Prot
Match: PER1_SOLLC (Suberization-associated anionic peroxidase 1 OS=Solanum lycopersicum GN=TAP1 PE=3 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 1.200e-27
Identity = 48/103 (46.60%), Postives = 63/103 (61.17%), Query Frame = 1
Query:  169 SIVRKQIQNALKKDIGLAAGLIRIHFHDCFVQGCDGSVLLEG----STSEQNARPNLSLRKEALKFVDDLRARVHKECGRV-VSCADILALAARDSVALSGGQ 462
            S VR  + +A+  +  + A LIR+HFHDCFV GCDG +LL+      T EQN+ PN +  +   + +   +  V   C  V VSCADILA+AARDSVA  GGQ
Sbjct:   84 SAVRAVVDSAIDAETRMGASLIRLHFHDCFVDGCDGGILLDDINGTFTGEQNSPPNANSAR-GYEVIAQAKQSVINTCPNVSVSCADILAIAARDSVAKLGGQ 185          

HSP 2 Score: 59.3066 bits (142), Expect = 1.200e-27
Identity = 30/60 (50.00%), Postives = 39/60 (65.00%), Query Frame = 3
Query:  465 YDLPLGRRDSKT--FATVVN-LPSPFSNTTVILNDFREKTFNARETVALSGGHTVGLAHC 635
            Y + LGR D++T  F+  +N LP+PF N TV +  F +K F  RE VAL+G HTVG A C
Sbjct:  187 YSVALGRSDARTANFSGAINQLPAPFDNLTVQIQKFSDKNFTLREMVALAGAHTVGFARC 246          
BLAST of FC931485 vs. ExPASy Swiss-Prot
Match: PER17_ARATH (Peroxidase 17 OS=Arabidopsis thaliana GN=PER17 PE=2 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 1.202e-27
Identity = 48/109 (44.04%), Postives = 72/109 (66.06%), Query Frame = 1
Query:  139 FYDQSCPKLESIVRKQIQNALKKDIGLAAGLIRIHFHDCFVQGCDGSVLLEGSTSEQNARPNLSLRKEALKF--VDDLRARVHKECGRVVSCADILALAARDSVALSGG 459
            FY ++CP+ ESIVR++++ A+ K+    A ++R  FHDCFV GCD S+LL+ + +    + +LS       F  VDD++  + K C   VSCADI+ +AARD+VAL+GG
Sbjct:   27 FYSETCPEAESIVRREMKKAMIKEARSVASVMRFQFHDCFVNGCDASLLLDDTPNMLGEKLSLSNIDSLRSFEVVDDIKEALEKACPATVSCADIVIMAARDAVALTGG 135          

HSP 2 Score: 45.8246 bits (107), Expect = 1.202e-27
Identity = 23/69 (33.33%), Postives = 41/69 (59.42%), Query Frame = 3
Query:  462 NYDLPLGRRDSKTFATVVN---LPSPFSNTTVILNDFREKTFNARETVALSGGHTVGLAHCPAFTNRLY 659
            ++++ LGR+DS T +   +   +PSP +N T +++ F     + ++ VALSG H++G   C +   RLY
Sbjct:  137 DWEVKLGRKDSLTASQQDSDDIMPSPRANATFLIDLFERFNLSVKDMVALSGSHSIGQGRCFSIMFRLY 205          
BLAST of FC931485 vs. ExPASy Swiss-Prot
Match: PER41_ARATH (Peroxidase 41 OS=Arabidopsis thaliana GN=PER41 PE=2 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 1.566e-27
Identity = 44/114 (38.60%), Postives = 66/114 (57.89%), Query Frame = 1
Query:  127 LSWTFYDQSCPKLESIVRKQIQNALKKDIGLAAGLIRIHFHDCFVQGCDGSVLLEGST---SEQNARPNLSLRKEALKFVDDLRARVHKECGRVVSCADILALAARDSVALSGG 459
            L+  +Y ++CP    IVR+ +     +    AAG +R+ FHDCF++GCD SVL+  ++   +E++   N SL  +A   V  ++  +   C  VVSCADILA A RD V + GG
Sbjct:   26 LTKDYYQKTCPDFNKIVRETVTPKQGQQPTTAAGTLRLFFHDCFMEGCDASVLIATNSFNKAERDDDLNESLPGDAFDIVTRIKTALELSCPGVVSCADILAQATRDLVTMVGG 139          

HSP 2 Score: 62.003 bits (149), Expect = 1.566e-27
Identity = 30/73 (41.10%), Postives = 44/73 (60.27%), Query Frame = 3
Query:  465 YDLPLGRRD---SKTFATVVNLPSPFSNTTVILNDFREKTFNARETVALSGGHTVGLAHCPAFTNRLYPNKTP 674
            Y++ LGR+D   SK      NLP    +   +L+ F++  F  +E VALSGGHT+G +HC  F+NR++P   P
Sbjct:  142 YEVKLGRKDGFESKAHKVKGNLPLANQSVPDMLSIFKKNGFTLKELVALSGGHTIGFSHCKEFSNRIFPKVDP 214          
BLAST of FC931485 vs. ExPASy Swiss-Prot
Match: PER2_ARAHY (Cationic peroxidase 2 OS=Arachis hypogaea GN=PNC2 PE=2 SV=1)

HSP 1 Score: 122.865 bits (307), Expect = 1.926e-27
Identity = 62/125 (49.60%), Postives = 85/125 (68.00%), Query Frame = 1
Query:  139 FYDQSCPKLESIVRKQIQNALKKDIGLAAGLIRIHFHDCFVQGCDGSVLLEGSTSEQNARPNLSLRKEALKFVDDLRARVHKECGRVVSCADILALAARDSVALSGG---QITTYHWEGETAKHS 504
            FY ++CP+ ESIVR  +++ +  D  LAA ++R+HFHDCFVQGCDGS+L+ G  +E+ A  NL LR    + +DD + ++   C  VVSCADILALAARDSV LSGG   Q+ T   +G  ++ S
Sbjct:   36 FYSRTCPRAESIVRSTVRSHVNSDPTLAAKILRMHFHDCFVQGCDGSILISGPATEKTAFANLGLR--GYEIIDDAKTQLEAACPGVVSCADILALAARDSVVLSGGLSWQVPTGRRDGRVSQAS 158          
BLAST of FC931485 vs. ExPASy Swiss-Prot
Match: PER2_ZINEL (Basic peroxidase OS=Zinnia elegans GN=POD3 PE=1 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 3.455e-27
Identity = 51/111 (45.95%), Postives = 71/111 (63.96%), Query Frame = 1
Query:  127 LSWTFYDQSCPKLESIVRKQIQNALKKDIGLAAGLIRIHFHDCFVQGCDGSVLLEGSTSEQNARPNLSLRKEALKFVDDLRARVHKECGRVVSCADILALAARDSVALSGG 459
            LS TFYD +CP   S +R  I++++  +   AA +IR+ FHDCFVQGCD S+LL G+ SE+ +  N  +     + +D  +A V + C  VVSCADILA+AARD+    GG
Sbjct:   32 LSTTFYDTTCPTALSTIRTSIRSSVSSNRRNAALVIRLLFHDCFVQGCDASLLLSGAGSERASPANDGVL--GYEVIDAAKAAVERVCPGVVSCADILAVAARDASVAVGG 140          

HSP 2 Score: 48.9062 bits (115), Expect = 3.455e-27
Identity = 27/69 (39.13%), Postives = 38/69 (55.07%), Query Frame = 3
Query:  462 NYDLPLGRRDSKTF---ATVVNLPSPFSNTTVILNDFREKTFNARETVALSGGHTVGLAHCPAFTNRLY 659
            ++ + LGRRDS T        +LP      + ++++F  K  N RE VALSG HT+G A C  F  R+Y
Sbjct:  142 SWTVRLGRRDSTTSNAAQAATDLPRGNMVLSQLISNFANKGLNTREMVALSGSHTLGQARCIRFRGRIY 210          
The following BLAST results are available for this feature:
BLAST of FC931485 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 108
Match NameE-valueIdentityDescription
PER3_ARMRU4.182e-2843.64Peroxidase C3 OS=Armoracia rusticana GN=PRXC3 PE=3... [more]
PER43_ARATH4.187e-2846.30Peroxidase 43 OS=Arabidopsis thaliana GN=PER43 PE=... [more]
PER22_ARATH5.444e-2843.64Peroxidase 22 OS=Arabidopsis thaliana GN=PER22 PE=... [more]
PER1_HORVU5.454e-2850.00Peroxidase 1 OS=Hordeum vulgare PE=2 SV=1[more]
PERX_TOBAC7.096e-2846.02Lignin-forming anionic peroxidase OS=Nicotiana tab... [more]
PER1_SOLLC1.200e-2746.60Suberization-associated anionic peroxidase 1 OS=So... [more]
PER17_ARATH1.202e-2744.04Peroxidase 17 OS=Arabidopsis thaliana GN=PER17 PE=... [more]
PER41_ARATH1.566e-2738.60Peroxidase 41 OS=Arabidopsis thaliana GN=PER41 PE=... [more]
PER2_ARAHY1.926e-2749.60Cationic peroxidase 2 OS=Arachis hypogaea GN=PNC2 ... [more]
PER2_ZINEL3.455e-2745.95Basic peroxidase OS=Zinnia elegans GN=POD3 PE=1 SV... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionC34105F04EF PostHarvP1 Citrus clementina cDNA clone C34105F04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931485 ID=FC931485; Name=FC931485; organism=Citrus clementina; type=EST; length=754bp
GAACCCAAAGCGAGGTAATCAACAATGGCAACTGCTTCAGCTTCTTCTTT
CATTTCTCTTCTTTTGATATCTTCTCTTTTGCTTGCTTCTTTCACTGAGG
CACAAAAGCCCCCAGTAGCGAAAGGTCTCTCATGGACTTTTTATGACCAG
AGCTGTCCCAAGCTTGAATCCATTGTCAGAAAACAGATCCAAAATGCCCT
GAAAAAAGATATCGGCCTAGCTGCTGGCTTGATTCGCATCCATTTCCACG
ATTGCTTCGTTCAGGGATGTGATGGATCAGTGTTGCTAGAGGGATCAACT
AGTGAGCAAAATGCACGTCCAAACCTAAGCTTAAGGAAGGAGGCTTTAAA
ATTTGTAGACGATCTTCGTGCTCGTGTTCACAAGGAGTGTGGCAGAGTTG
TTTCTTGTGCTGATATTCTTGCCCTTGCTGCTCGCGATTCTGTTGCCTTG
TCTGGAGGGCAAATTACGACCTACCATTGGGAAGGCGAGACAGCAAAACA
TTCGCAACAGTGGTAAATCTGCCATCACCGTTCAGCAACACCACCGTGAT
CCTCAACGATTTCCGAGAAAAAACCTTCAACGCCAGGGAAACCGTGGCCC
TCTCCGGCGGGCACACCGTTGGGCTAGCTCACTGCCCTGCATTCACCAAT
CGCCTCTATCCCAACAAGACCCCACACTGGACAAACATTCGCCAACATCT
CAAAAGACATGCCCACTTCGGATTCCAACACACACGTCTTCGACATCGGT
CCCG
back to top