FC931485

Overview
NameFC931485
Unique NameFC931485
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length754
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC931485 vs. ExPASy Swiss-Prot
Match: PER65_ARATH (Peroxidase 65 OS=Arabidopsis thaliana GN=PER65 PE=2 SV=2)

HSP 1 Score: 82.0333 bits (201), Expect = 1.801e-25
Identity = 43/110 (39.09%), Postives = 64/110 (58.18%), Query Frame = 1
Query:  139 FYDQSCPKLESIVRKQIQNALKKDIGLAAGLIRIHFHDCFVQGCDGSVLLEGST---SEQNARPNLSLRKEALKFVDDLRARVHKECGRVVSCADILALAARDSVALSGG 459
            +Y ++CP    IVR+ +     +    AAG +R+ FHDCF++GCD SVL+  ++   +E++   N SL  +A   V  ++  +   C  VVSCADILA A RD V + GG
Sbjct:   37 YYQKTCPDFHKIVREAVTTKQVQQPTTAAGTLRLFFHDCFLEGCDASVLIATNSFNKAERDDDLNDSLPGDAFDIVTRIKTALELSCPGVVSCADILAQATRDLVTMVGG 146          

HSP 2 Score: 55.0694 bits (131), Expect = 1.801e-25
Identity = 32/79 (40.51%), Postives = 47/79 (59.49%), Query Frame = 3
Query:  465 YDLPLGRRDS-KTFATVVNLPSPFSNTTV--ILNDFREKTFNARETVALSGGHTVGLAHCPAFTNRLYPNKTPHWTNIR 692
            +D+ LGR+D  ++ A  V    P +N TV  I   F++  F+ RE VALSG HT+G +HC  F++RLY ++     N R
Sbjct:  149 FDVKLGRKDGFESKAHKVRGNVPMANQTVPDIHGIFKKNGFSLREMVALSGAHTIGFSHCKEFSDRLYGSRADKEINPR 227          
BLAST of FC931485 vs. ExPASy Swiss-Prot
Match: PER18_ARATH (Peroxidase 18 OS=Arabidopsis thaliana GN=PER18 PE=2 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 2.345e-25
Identity = 51/113 (45.13%), Postives = 71/113 (62.83%), Query Frame = 1
Query:  127 LSWTFYDQSCPKLESIVRKQIQNALKKDIGLAAGLIRIHFHDCFVQGCDGSVLLEGSTSEQNARPNLSLRKEALKFVDDLRARVHKECGRVVSCADILALAARDSVALSGGQI 465
            LS+ FY  SCP  E IVR  +++A   D  +   L+R+ FHDCFVQGCDGSVL+ G+ +E++   N SL   A+  ++ ++  +   C   VSCADIL LAARD+V   GG +
Sbjct:   31 LSFNFYAGSCPGAELIVRNTVRSASSSDPSVLGKLLRLIFHDCFVQGCDGSVLIRGNGTERSDPGNASLGGFAV--IESVKNILEIFCPGTVSCADILVLAARDAVEALGGPV 141          

HSP 2 Score: 41.9726 bits (97), Expect = 2.345e-25
Identity = 21/64 (32.81%), Postives = 30/64 (46.88%), Query Frame = 3
Query:  471 LPLGRRDSKTFATVVNLPSPFSNTTVI---LNDFREKTFNARETVALSGGHTVGLAHCPAFTNR 653
            +P GRRD +        P+       +   +N F  K  +  + V LSG HT+G AHC  F +R
Sbjct:  144 IPTGRRDGRVSMAANVRPNIIDTDFTVDKMINIFSSKGLSVHDLVVLSGAHTIGAAHCNTFNSR 207          
BLAST of FC931485 vs. ExPASy Swiss-Prot
Match: PER16_ARATH (Peroxidase 16 OS=Arabidopsis thaliana GN=PER16 PE=1 SV=2)

HSP 1 Score: 86.2705 bits (212), Expect = 3.974e-25
Identity = 47/113 (41.59%), Postives = 67/113 (59.29%), Query Frame = 1
Query:  127 LSWTFYDQSCPKLESIVRKQIQNALKKDIGLAAGLIRIHFHDCFVQGCDGSVLLEGSTSEQNARPNLSLRKEALKFVDDLRARVHKE--CGRVVSCADILALAARDSVALSGG 459
            L   FY +SCP +E+IVR  ++   ++    A   +R+ FHDCFV+GCD S+LL  S SE++   + SL  +    V   +  + ++  C   VSCADILALA RD V L+GG
Sbjct:   25 LQTNFYRKSCPNVETIVRNAVRQKFQQTFVTAPATLRLFFHDCFVRGCDASILL-ASPSEKDHPDDKSLAGDGFDTVAKAKQALDRDPNCRNKVSCADILALATRDVVVLTGG 136          

HSP 2 Score: 49.6766 bits (117), Expect = 3.974e-25
Identity = 27/69 (39.13%), Postives = 38/69 (55.07%), Query Frame = 3
Query:  462 NYDLPLGRRDSK--TFATVVN-LPSPFSNTTVILNDFREKTFNARETVALSGGHTVGLAHCPAFTNRLY 659
            NY + LGRRD +  T A+V + LP P      +   F     +  + +ALSG HT+G AHC  F+ R+Y
Sbjct:  138 NYPVELGRRDGRLSTVASVQHSLPQPSFKLDQLNTMFARHGLSQTDMIALSGAHTIGFAHCGKFSKRIY 206          
BLAST of FC931485 vs. ExPASy Swiss-Prot
Match: PER71_ARATH (Peroxidase 71 OS=Arabidopsis thaliana GN=PER71 PE=1 SV=1)

HSP 1 Score: 114.775 bits (286), Expect = 5.245e-25
Identity = 57/133 (42.86%), Postives = 84/133 (63.16%), Query Frame = 1
Query:  106 KPPVAKGLSWTFYDQSCPKLESIVRKQIQNALKKDIGLAAGLIRIHFHDCFVQGCDGSVLLEGSTSEQNARPNLSLRKEALKFVDDLRARVHKECGRVVSCADILALAARDSVAL---SGGQITTYHWEGETA 495
            +P    G    FY  +CP+ E+IVR  +      D  +A G++R+HFHDCFVQGCDGS+L+ G+ +E+ A PNL+L  +  + +D+ + ++   C  VVSCADILALAARD+V L   +G Q+ T   +G  +
Sbjct:   28 RPGPVSGTRIGFYLTTCPRAETIVRNAVNAGFSSDPRIAPGILRMHFHDCFVQGCDGSILISGANTERTAGPNLNL--QGFEVIDNAKTQLEAACPGVVSCADILALAARDTVILTQGTGWQVPTGRRDGRVS 158          
BLAST of FC931485 vs. ExPASy Swiss-Prot
Match: PER1_ORYSJ (Peroxidase 1 OS=Oryza sativa subsp. japonica GN=PRX74 PE=2 SV=2)

HSP 1 Score: 113.62 bits (283), Expect = 1.168e-24
Identity = 64/146 (43.84%), Postives = 88/146 (60.27%), Query Frame = 1
Query:  139 FYDQSCPKLESIVRKQIQNALKKDIGLAAGLIRIHFHDCFVQGCDGSVLLE---GSTSEQNARPNLSLRKEALKFVDDLRARVHKECGRVVSCADILALAARDSVALSGGQITTYHWEGETAKHSQQW*ICHHRSATPP*SSTISE 567
            FY  SCP +E++VRK++  AL     LA  L+R+HFHDCFV+GCDGSVLL+    ST+E++A PN +LR     FV+ ++A V K C   VSCAD+LAL ARD+V LS G      W     +   +  I +     PP ++  +E
Sbjct:   28 FYSNSCPSVEAVVRKEMVRALGAAPSLAGPLLRMHFHDCFVRGCDGSVLLDSAGNSTAEKDATPNQTLR--GFGFVERVKAAVEKACPGTVSCADVLALMARDAVWLSKGPF----WAVPLGRRDGRVSIANETDQLPPPTANFTE 167          
BLAST of FC931485 vs. ExPASy Swiss-Prot
Match: PER7_ARATH (Peroxidase 7 OS=Arabidopsis thaliana GN=PER7 PE=2 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 1.481e-24
Identity = 48/131 (36.64%), Postives = 72/131 (54.96%), Query Frame = 1
Query:  112 PVAKGLSWTFYDQSCPKLESIVRKQIQNALKKDIGLAAGLIRIHFHDCFVQGCDGSVLLEGSTSEQNARPNLSLRKEALKFVDDLRARVHKECGRVVSCADILALAARDSVALSGGQITTYHWEGETAKHS 504
            P+   LS  +YD+ CP  E IV  +++   K D  L   L+R+ FHDC V GCD SVLL+   +E+ +  + +LR    + +DD+++ + K C   VSCADIL  A+R +    GG      +    +KHS
Sbjct:   46 PLDNLLSLNYYDRICPDFEKIVVTKVREWTKSDSSLGPALLRLIFHDCGVTGCDASVLLDYEGTERRSPASKTLR--GFELIDDIKSEMEKSCPGKVSCADILTSASRAATVQLGGPYWPNVYGRRDSKHS 174          

HSP 2 Score: 45.0542 bits (105), Expect = 1.481e-24
Identity = 26/62 (41.94%), Postives = 35/62 (56.45%), Query Frame = 3
Query:  480 GRRDSK-TFAT-VVNLPSPFSNTTVILNDFREKTFNARETVALSGGHTVGLAHCPAFTNRLY 659
            GRRDSK ++A  V  +PS   + T +L  F+    N  + V LSG HT+G A C    +RLY
Sbjct:  167 GRRDSKHSYARDVEKVPSGRRDVTALLETFQSYGLNVLDLVVLSGAHTIGKASCGTIQSRLY 228          
BLAST of FC931485 vs. ExPASy Swiss-Prot
Match: PER2_MAIZE (Peroxidase 2 OS=Zea mays GN=PER2 PE=2 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 5.534e-24
Identity = 50/116 (43.10%), Postives = 74/116 (63.79%), Query Frame = 1
Query:  139 FYDQSCPKLESIVRKQIQNALKKDIGLAAGLIRIHFHDCFVQGCDGSVLLE----GSTSEQNARP-NLSLRKEALKFVDDLRARVHKECGRVVSCADILALAARD-SVALSGGQIT 468
            +Y  +CP+ E+IV+  ++ A+ ++ G  A +IR+ FHDCFV+GCD SVLL+      T E+ A P N SLR    + +D ++  +   C  VVSCADI+A AARD S  LS G+++
Sbjct:   39 YYRYTCPQAEAIVKASMEKAIAQNPGNGAAVIRMLFHDCFVEGCDASVLLDPTPFSPTPEKLAAPNNPSLR--GFELIDAIKDALEAACPGVVSCADIIAFAARDASCFLSQGKVS 152          

HSP 2 Score: 45.8246 bits (107), Expect = 5.534e-24
Identity = 24/68 (35.29%), Postives = 37/68 (54.41%), Query Frame = 3
Query:  456 RANYDLPLGRRD---SKTFATVVNLPSPFSNTTVILNDFREKTFNARETVALSGGHTVGLAHCPAFTN 650
            + ++D+P GR D   S    +V  L  P SN + + + F  K  +  + V LSG HTVG +HC +F +
Sbjct:  150 KVSFDMPSGRLDGTFSNASESVKFLVPPTSNLSDLASSFAVKGMSLEDLVVLSGAHTVGRSHCSSFVS 217          
BLAST of FC931485 vs. ExPASy Swiss-Prot
Match: PER27_ARATH (Peroxidase 27 OS=Arabidopsis thaliana GN=PER27 PE=1 SV=1)

HSP 1 Score: 111.309 bits (277), Expect = 5.799e-24
Identity = 63/130 (48.46%), Postives = 86/130 (66.15%), Query Frame = 1
Query:  118 AKGLSWTFYDQSCPKLESIVRKQIQNALKKDIGLAAGLIRIHFHDCFVQGCDGSVLLE--GSTSEQNARPNLSLRKEALKFVDDLRARVHKECGRVVSCADILALAARDS-VALSGGQITTYHWEGETAK 498
            ++GL   FY ++CP+LE IV+K + +A+ K   L A L+R+ FHDCFV+GCDGSVLL+   +  E++A PNLSLR      +DD +A + K C  +VSC+DILAL ARD+ VAL G       WE ET +
Sbjct:   23 SQGLKVGFYSKTCPQLEGIVKKVVFDAMNKAPTLGAPLLRMFFHDCFVRGCDGSVLLDKPNNQGEKSAVPNLSLR--GFGIIDDSKAALEKVCPGIVSCSDILALVARDAMVALEGPS-----WEVETGR 145          

HSP 2 Score: 77.0258 bits (188), Expect = 1.203e-13
Identity = 41/92 (44.57%), Postives = 53/92 (57.61%), Query Frame = 3
Query:  420 CP---CCSRFCCLVWR--------ANYDLPLGRRDSKTF-ATVVNLPSPFSNTTVILNDFREKTFNARETVALSGGHTVGLAHCPAFTNRLY 659
            CP    CS    LV R         ++++  GRRD +      VNLPSPF N T +++DFR K  N ++ V LSGGHT+G+ HCP  TNRLY
Sbjct:  113 CPGIVSCSDILALVARDAMVALEGPSWEVETGRRDGRVSNINEVNLPSPFDNITKLISDFRSKGLNEKDLVILSGGHTIGMGHCPLLTNRLY 204          
BLAST of FC931485 vs. ExPASy Swiss-Prot
Match: PER26_ARATH (Probable peroxidase 26 OS=Arabidopsis thaliana GN=PER26 PE=2 SV=2)

HSP 1 Score: 89.3521 bits (220), Expect = 9.371e-24
Identity = 50/117 (42.74%), Postives = 69/117 (58.97%), Query Frame = 1
Query:  112 PVAKGLSWTFYD--QSCPKLESIVRKQIQNALKKDIGLAAGLIRIHFHDCFVQGCDGSVLLEGSTSEQNARPNLSLRKEALKFVDDLRARVHKECGRVVSCADILALAARDSVALSG 456
            P  + L+W +Y    +C   E+ VR Q++   K D  +A  L+R+ + DCFV GCD SVLLEG  SE+ A  N  L    L  +D ++  + + C  VVSCADIL LA RD+V L+G
Sbjct:   30 PSMQKLTWHYYKVYNTCENAENFVRHQVEIFYKNDKSIAPKLLRLLYSDCFVSGCDASVLLEGPNSEKMAPQNRGLGGFVL--IDKIKIVLEQRCPGVVSCADILNLATRDAVHLAG 144          

HSP 2 Score: 41.9726 bits (97), Expect = 9.371e-24
Identity = 25/72 (34.72%), Postives = 37/72 (51.39%), Query Frame = 3
Query:  462 NYDLPLGRRDSKTF-ATVVNLPSPFSNTTVILNDFREKTFNARETVALSGGHTVGLAHCPAFTNRLYP-NKT 671
            +Y +  GRRD  T     V+LPSP  +    ++ F+ +  N  +   L G H++G  HC    +RLY  NKT
Sbjct:  147 SYPVFTGRRDGLTSDKQTVDLPSPSISWDQAMSYFKSRGLNVLDMATLLGSHSMGRTHCSYVVDRLYNYNKT 218          
BLAST of FC931485 vs. ExPASy Swiss-Prot
Match: PER45_ARATH (Peroxidase 45 OS=Arabidopsis thaliana GN=PER45 PE=1 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 9.376e-24
Identity = 46/117 (39.32%), Postives = 68/117 (58.12%), Query Frame = 1
Query:  115 VAKGLSWTFYDQSCPKLESIVRKQIQNALKKDIGLAAGLIRIHFHDCFVQGCDGSVLLEGSTSEQNARPNLSLRKEALKFVDDLRARV--HKECGRVVSCADILALAARDSVALSGG 459
            V+  L   FY  SCP +E+IVR  ++   ++    A   +R+ FHDCFV+GCD S+++  S SE++   ++SL  +    V   +  V  +  C   VSCADILALA R+ V L+GG
Sbjct:   23 VSAQLRTGFYQNSCPNVETIVRNAVRQKFQQTFVTAPATLRLFFHDCFVRGCDASIMI-ASPSERDHPDDMSLAGDGFDTVVKAKQAVDSNPNCRNKVSCADILALATREVVVLTGG 138          

HSP 2 Score: 46.9802 bits (110), Expect = 9.376e-24
Identity = 26/69 (37.68%), Postives = 38/69 (55.07%), Query Frame = 3
Query:  462 NYDLPLGRRDSK--TFATVVN-LPSPFSNTTVILNDFREKTFNARETVALSGGHTVGLAHCPAFTNRLY 659
            +Y + LGRRD +  T A+V + LP P  N   +   F     +  + +ALSG HT+G AHC   + R+Y
Sbjct:  140 SYPVELGRRDGRISTKASVQSQLPQPEFNLNQLNGMFSRHGLSQTDMIALSGAHTIGFAHCGKMSKRIY 208          
The following BLAST results are available for this feature:
BLAST of FC931485 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 108
Match NameE-valueIdentityDescription
PER65_ARATH1.801e-2539.09Peroxidase 65 OS=Arabidopsis thaliana GN=PER65 PE=... [more]
PER18_ARATH2.345e-2545.13Peroxidase 18 OS=Arabidopsis thaliana GN=PER18 PE=... [more]
PER16_ARATH3.974e-2541.59Peroxidase 16 OS=Arabidopsis thaliana GN=PER16 PE=... [more]
PER71_ARATH5.245e-2542.86Peroxidase 71 OS=Arabidopsis thaliana GN=PER71 PE=... [more]
PER1_ORYSJ1.168e-2443.84Peroxidase 1 OS=Oryza sativa subsp. japonica GN=PR... [more]
PER7_ARATH1.481e-2436.64Peroxidase 7 OS=Arabidopsis thaliana GN=PER7 PE=2 ... [more]
PER2_MAIZE5.534e-2443.10Peroxidase 2 OS=Zea mays GN=PER2 PE=2 SV=1[more]
PER27_ARATH5.799e-2448.46Peroxidase 27 OS=Arabidopsis thaliana GN=PER27 PE=... [more]
PER26_ARATH9.371e-2442.74Probable peroxidase 26 OS=Arabidopsis thaliana GN=... [more]
PER45_ARATH9.376e-2439.32Peroxidase 45 OS=Arabidopsis thaliana GN=PER45 PE=... [more]

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Properties
Property NameValue
Genbank descriptionC34105F04EF PostHarvP1 Citrus clementina cDNA clone C34105F04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931485 ID=FC931485; Name=FC931485; organism=Citrus clementina; type=EST; length=754bp
GAACCCAAAGCGAGGTAATCAACAATGGCAACTGCTTCAGCTTCTTCTTT
CATTTCTCTTCTTTTGATATCTTCTCTTTTGCTTGCTTCTTTCACTGAGG
CACAAAAGCCCCCAGTAGCGAAAGGTCTCTCATGGACTTTTTATGACCAG
AGCTGTCCCAAGCTTGAATCCATTGTCAGAAAACAGATCCAAAATGCCCT
GAAAAAAGATATCGGCCTAGCTGCTGGCTTGATTCGCATCCATTTCCACG
ATTGCTTCGTTCAGGGATGTGATGGATCAGTGTTGCTAGAGGGATCAACT
AGTGAGCAAAATGCACGTCCAAACCTAAGCTTAAGGAAGGAGGCTTTAAA
ATTTGTAGACGATCTTCGTGCTCGTGTTCACAAGGAGTGTGGCAGAGTTG
TTTCTTGTGCTGATATTCTTGCCCTTGCTGCTCGCGATTCTGTTGCCTTG
TCTGGAGGGCAAATTACGACCTACCATTGGGAAGGCGAGACAGCAAAACA
TTCGCAACAGTGGTAAATCTGCCATCACCGTTCAGCAACACCACCGTGAT
CCTCAACGATTTCCGAGAAAAAACCTTCAACGCCAGGGAAACCGTGGCCC
TCTCCGGCGGGCACACCGTTGGGCTAGCTCACTGCCCTGCATTCACCAAT
CGCCTCTATCCCAACAAGACCCCACACTGGACAAACATTCGCCAACATCT
CAAAAGACATGCCCACTTCGGATTCCAACACACACGTCTTCGACATCGGT
CCCG
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