FC931485

Overview
NameFC931485
Unique NameFC931485
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length754
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC931485 vs. ExPASy Swiss-Prot
Match: PER2_ORYSJ (Peroxidase 2 OS=Oryza sativa subsp. japonica GN=PRX112 PE=2 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 9.891e-24
Identity = 64/131 (48.85%), Postives = 79/131 (60.31%), Query Frame = 1
Query:  127 LSWTFYDQSCPKLESIVRKQIQNALKKDIGLAAGLIRIHFHDCFVQGCDGSVLLEGSTSEQNARPNL-SLRKEALKFVDDLRARVHKECGRVVSCADILALAARDSVALSGGQITTY---HWEGETAKHSQ 507
            LS TFYD SCP   S ++  +  A+  +  + A L+R+HFHDCFVQGCD SVLL G   EQNA PN  SLR      VD+++ +V   C + VSCADILA+AARDSV   GG   T      +  TA  SQ
Sbjct:   25 LSATFYDTSCPNALSTIKSAVTAAVNSEPRMGASLVRLHFHDCFVQGCDASVLLSG--QEQNAGPNAGSLR--GFNVVDNIKTQVEAICSQTVSCADILAVAARDSVVALGGPSWTVLLGRRDSTTANESQ 151          
BLAST of FC931485 vs. ExPASy Swiss-Prot
Match: PER2_ORYSI (Peroxidase 2 OS=Oryza sativa subsp. indica GN=PRX112 PE=3 SV=2)

HSP 1 Score: 110.538 bits (275), Expect = 9.891e-24
Identity = 64/131 (48.85%), Postives = 79/131 (60.31%), Query Frame = 1
Query:  127 LSWTFYDQSCPKLESIVRKQIQNALKKDIGLAAGLIRIHFHDCFVQGCDGSVLLEGSTSEQNARPNL-SLRKEALKFVDDLRARVHKECGRVVSCADILALAARDSVALSGGQITTY---HWEGETAKHSQ 507
            LS TFYD SCP   S ++  +  A+  +  + A L+R+HFHDCFVQGCD SVLL G   EQNA PN  SLR      VD+++ +V   C + VSCADILA+AARDSV   GG   T      +  TA  SQ
Sbjct:   25 LSATFYDTSCPNALSTIKSAVTAAVNSEPRMGASLVRLHFHDCFVQGCDASVLLSG--QEQNAGPNAGSLR--GFNVVDNIKTQVEAICSQTVSCADILAVAARDSVVALGGPSWTVLLGRRDSTTANESQ 151          
BLAST of FC931485 vs. ExPASy Swiss-Prot
Match: PER8_ARATH (Peroxidase 8 OS=Arabidopsis thaliana GN=PER8 PE=2 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 1.221e-23
Identity = 46/120 (38.33%), Postives = 73/120 (60.83%), Query Frame = 1
Query:  109 PPVAKGLSWTFYDQSCPKLESIVRKQIQNALKKDIGLAAGLIRIHFHDCFVQGCDGSVLLEGST---SEQNARPNLSLRKEALKFVDDLRARVHKECGRVVSCADILALAARDSVALSGG 459
            P V   L   FY+ +CP  ESIV + + N   ++  + A L+R+ FHDC V+GCD S+L++ +T   SE++   N  +R    + +D+ +  +   C + VSCADI+ +A RDS+AL+GG
Sbjct:   16 PSVFAQLRHGFYEGTCPPAESIVGRVVFNHWDRNRTVTAALLRMQFHDCVVKGCDASLLIDPTTERPSEKSVGRNAGVR--GFEIIDEAKKELELVCPKTVSCADIVTIATRDSIALAGG 133          

HSP 2 Score: 41.5874 bits (96), Expect = 1.221e-23
Identity = 28/78 (35.90%), Postives = 40/78 (51.28%), Query Frame = 3
Query:  480 GRRDS-KTFATVVNLPSPFSNTTVILNDFREKTFNARETVAL-SGGHTVGLAHCPAFTNRLYPNKTPHWTNIRQHLKR 707
            GRRD  ++  + V L  P  +    +  F+   FN    VAL  GGHTVG+AHC  F +R+   K    + +R  LK+
Sbjct:  141 GRRDGLRSNPSDVKLLGPTVSVATSIKAFKSIGFNVSTMVALIGGGHTVGVAHCSLFQDRIKDPKMD--SKLRAKLKK 216          
BLAST of FC931485 vs. ExPASy Swiss-Prot
Match: PER50_ARATH (Peroxidase 50 OS=Arabidopsis thaliana GN=PER50 PE=1 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 2.066e-23
Identity = 43/112 (38.39%), Postives = 62/112 (55.36%), Query Frame = 1
Query:  139 FYDQSCPKLESIVRKQIQNALKKDIGLAAGLIRIHFHDCFVQGCDGSVLL---EGSTSEQNARPNLSLRKEALKFVDDLRARVH--KECGRVVSCADILALAARDSVALSGG 459
            FY  SCP +E IVR  +Q  +++        +R++FHDCFV GCD SV++     + +E++   NLSL  +    V   +  +     C   VSCADIL +A RD V L+GG
Sbjct:   31 FYAGSCPNVEQIVRNAVQKKVQQTFTTIPATLRLYFHDCFVNGCDASVMIASTNNNKAEKDHEENLSLAGDGFDTVIKAKEALDAVPNCRNKVSCADILTMATRDVVNLAGG 142          

HSP 2 Score: 49.6766 bits (117), Expect = 2.066e-23
Identity = 30/73 (41.10%), Postives = 41/73 (56.16%), Query Frame = 3
Query:  465 YDLPLGRRD--SKTFATVVN-LPSPFSNTTVILNDFREKTFNARETVALSGGHTVGLAHCPAFTNRLYP-NKT 671
            YD+ LGR D  S T A+V   LP P  +   + + F +   +  + +ALSG HT+G AHC    NR+Y  NKT
Sbjct:  145 YDVELGRLDGLSSTAASVGGKLPHPTDDVNKLTSLFAKNGLSLNDMIALSGAHTLGFAHCTKVFNRIYTFNKT 217          
BLAST of FC931485 vs. ExPASy Swiss-Prot
Match: PER40_ARATH (Peroxidase 40 OS=Arabidopsis thaliana GN=PER40 PE=2 SV=2)

HSP 1 Score: 108.997 bits (271), Expect = 2.878e-23
Identity = 60/128 (46.88%), Postives = 79/128 (61.72%), Query Frame = 1
Query:  127 LSWTFYDQSCPKLESIVRKQIQNALKKDIGLAAGLIRIHFHDCFVQGCDGSVLL---EGSTSEQNARPNL-SLRKEALKFVDDLRARVHKECGRVVSCADILALAARDSVALSGGQITTYHWEGETAK 498
            L +  Y  SCP+ ESIV   ++  + +D  +AA L+R+HFHDCFV GCD SVLL   EG   E+ A PNL SLR    + +D +++ +   C   VSCADILA+AARDSV +SGG      WE E  +
Sbjct:   50 LDFGLYRNSCPEAESIVYSWVETTVLEDPRMAASLLRLHFHDCFVNGCDASVLLDDTEGLVGEKTAPPNLNSLR--GFEVIDSIKSDIESVCPETVSCADILAMAARDSVVVSGGP----RWEVEVGR 171          
BLAST of FC931485 vs. ExPASy Swiss-Prot
Match: PER61_ARATH (Probable peroxidase 61 OS=Arabidopsis thaliana GN=PER61 PE=2 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 3.495e-23
Identity = 47/118 (39.83%), Postives = 67/118 (56.78%), Query Frame = 1
Query:  109 PPVAKGLSWTFYD--QSCPKLESIVRKQIQNALKKDIGLAAGLIRIHFHDCFVQGCDGSVLLEGSTSEQNARPNLSLRKEALKFVDDLRARVHKECGRVVSCADILALAARDSVALSG 456
            PPV   L W +Y    +C   E+ +R Q++   K D  +A  L+R+ + DC V GCDGS+LL+G  SE+ A  N  L       +D ++  +   C  VVSCADIL LA RD+V ++G
Sbjct:   31 PPVK--LVWHYYKLTNTCDDAETYIRYQVEKFYKNDSSIAPKLLRLLYSDCMVNGCDGSILLQGPNSERTAPQNRGL--GGFVIIDKIKQVLESRCPGVVSCADILNLATRDAVHMAG 144          

HSP 2 Score: 43.1282 bits (100), Expect = 3.495e-23
Identity = 24/67 (35.82%), Postives = 34/67 (50.75%), Query Frame = 3
Query:  462 NYDLPLGRRDSKTF-ATVVNLPSPFSNTTVILNDFREKTFNARETVALSGGHTVGLAHCPAFTNRLY 659
            +Y +  GRRD  T  A  V+LPSP  +    L  F+ K  +  +   L G H++G  HC    +RLY
Sbjct:  147 SYPVFTGRRDGGTLNADAVDLPSPSISVDESLAYFKSKGLDVLDMTTLLGAHSMGKTHCSYVVDRLY 213          
BLAST of FC931485 vs. ExPASy Swiss-Prot
Match: PER21_ARATH (Peroxidase 21 OS=Arabidopsis thaliana GN=PER21 PE=1 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 4.551e-23
Identity = 46/114 (40.35%), Postives = 67/114 (58.77%), Query Frame = 1
Query:  127 LSWTFYDQSCPKLESIVRKQIQNALKKDIGLAAGLIRIHFHDCFVQGCDGSVLLE---GSTSEQNARPNLSLRKEALKFVDDLRARVHKECGRVVSCADILALAARDSVALSGG 459
            L   +Y +SCPK E I+R+Q++    K    A   +R  FHDC V+ CD S+LLE   G  SEQ ++ +  +R    K+V  ++  + KEC   VSCADI+AL+ARD + +  G
Sbjct:   30 LEMNYYKESCPKAEEIIRQQVETLYYKHGNTAVSWLRNLFHDCVVKSCDASLLLETARGVESEQKSKRSFGMRN--FKYVKIIKDALEKECPSTVSCADIVALSARDGIVMLKG 141          

HSP 2 Score: 40.4318 bits (93), Expect = 4.551e-23
Identity = 24/68 (35.29%), Postives = 35/68 (51.47%), Query Frame = 3
Query:  480 GRRDSK-TFATVVNLPSPFSNTTV--ILNDFREKTFNARETVALSGGHTVGLAHCPAFTNRLYPNKTP 674
            GRRDS+ ++   V    P  N ++  +++ F     +   TVAL G H+VG  HC    +RLYP   P
Sbjct:  150 GRRDSRGSYLGDVETLIPNHNDSLSSVISTFNSIGIDVEATVALLGAHSVGRVHCVNLVHRLYPTIDP 217          
BLAST of FC931485 vs. ExPASy Swiss-Prot
Match: PER51_ARATH (Peroxidase 51 OS=Arabidopsis thaliana GN=PER51 PE=2 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 5.922e-23
Identity = 43/112 (38.39%), Postives = 62/112 (55.36%), Query Frame = 1
Query:  139 FYDQSCPKLESIVRKQIQNALKKDIGLAAGLIRIHFHDCFVQGCDGSVLLEGST---SEQNARPNLSLRKEALKFVDDLRARVH--KECGRVVSCADILALAARDSVALSGG 459
            FY  +CP +E IVR  +Q  +++        +R++FHDCFV GCD SV++  +    +E++   NLSL  +    V   +  V     C   VSCADIL +A RD V L+GG
Sbjct:   31 FYAGTCPNVEQIVRNAVQKKIQQTFTTIPATLRLYFHDCFVNGCDASVMIASTNTNKAEKDHEDNLSLAGDGFDTVIKAKEAVDAVPNCRNKVSCADILTMATRDVVNLAGG 142          

HSP 2 Score: 47.7506 bits (112), Expect = 5.922e-23
Identity = 29/73 (39.73%), Postives = 37/73 (50.68%), Query Frame = 3
Query:  465 YDLPLGRRD---SKTFATVVNLPSPFSNTTVILNDFREKTFNARETVALSGGHTVGLAHCPAFTNRLYP-NKT 671
            Y + LGRRD   S   +    LP P  +   +   F E   +  + +ALSG HT+G AHC    NRLY  NKT
Sbjct:  145 YAVELGRRDGLSSSASSVTGKLPKPTFDLNQLNALFAENGLSPNDMIALSGAHTLGFAHCTKVFNRLYNFNKT 217          
BLAST of FC931485 vs. ExPASy Swiss-Prot
Match: PERA2_ARMRU (Peroxidase A2 OS=Armoracia rusticana GN=HRPA2 PE=1 SV=1)

HSP 1 Score: 107.457 bits (267), Expect = 8.373e-23
Identity = 55/114 (48.25%), Postives = 74/114 (64.91%), Query Frame = 1
Query:  127 LSWTFYDQSCPKLESIVRKQIQNALKKDIGLAAGLIRIHFHDCFVQGCDGSVLLEGS---TSEQNARPNLSLRKEALKFVDDLRARVHKECGRVVSCADILALAARDSVALSGG 459
            L+ TFY  +CP   +IVR  IQ A + D  + A LIR+HFHDCFV GCD S+LL+ S    SE+NA PN +  +     VD+++  +   C  VVSC+DILALA+  SV+L+GG
Sbjct:    2 LNATFYSGTCPNASAIVRSTIQQAFQSDTRIGASLIRLHFHDCFVDGCDASILLDDSGSIQSEKNAGPNANSAR-GFNVVDNIKTALENTCPGVVSCSDILALASEASVSLTGG 114          
BLAST of FC931485 vs. ExPASy Swiss-Prot
Match: PER42_ARATH (Peroxidase 42 OS=Arabidopsis thaliana GN=PER42 PE=1 SV=2)

HSP 1 Score: 82.8037 bits (203), Expect = 2.872e-22
Identity = 40/113 (35.40%), Postives = 66/113 (58.41%), Query Frame = 1
Query:  124 GLSWTFYDQSCPKLESIVRKQIQNALKKDIGLAAGLIRIHFHDCFVQGCDGSVLLEGSTSEQNARP-NLSLRKEALKFVDDLRARVHKECGRVVSCADILALAARDSVALSGG 459
            GL   FY  +CP+ E IVR+Q++   K+    A   +R  FHDC V+ CD S+LL+ +  E   +  + S      +++++++  + +EC  VVSC+DIL L+AR+ +   GG
Sbjct:   30 GLMMNFYKDTCPQAEDIVREQVKLLYKRHKNTAFSWLRNIFHDCAVESCDASLLLDSTRRELGEKEHDRSFGLRNFRYIEEIKEALERECPGVVSCSDILVLSAREGIEAVGG 142          

HSP 2 Score: 43.5134 bits (101), Expect = 2.872e-22
Identity = 26/71 (36.62%), Postives = 34/71 (47.89%), Query Frame = 3
Query:  471 LPLGRRD---SKTFATVVNLPSPFSNTTVILNDFREKTFNARETVALSGGHTVGLAHCPAFTNRLYPNKTP 674
            L  GRRD   S+T      LP    + +V+L  F+    +    VAL G H+VG  HC    +RLYP   P
Sbjct:  147 LKTGRRDGLKSRTDMLESYLPDHNESISVVLEKFKSIGIDTPGLVALLGSHSVGRTHCVKLVHRLYPEVDP 217          
The following BLAST results are available for this feature:
BLAST of FC931485 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 108
Match NameE-valueIdentityDescription
PER2_ORYSJ9.891e-2448.85Peroxidase 2 OS=Oryza sativa subsp. japonica GN=PR... [more]
PER2_ORYSI9.891e-2448.85Peroxidase 2 OS=Oryza sativa subsp. indica GN=PRX1... [more]
PER8_ARATH1.221e-2338.33Peroxidase 8 OS=Arabidopsis thaliana GN=PER8 PE=2 ... [more]
PER50_ARATH2.066e-2338.39Peroxidase 50 OS=Arabidopsis thaliana GN=PER50 PE=... [more]
PER40_ARATH2.878e-2346.88Peroxidase 40 OS=Arabidopsis thaliana GN=PER40 PE=... [more]
PER61_ARATH3.495e-2339.83Probable peroxidase 61 OS=Arabidopsis thaliana GN=... [more]
PER21_ARATH4.551e-2340.35Peroxidase 21 OS=Arabidopsis thaliana GN=PER21 PE=... [more]
PER51_ARATH5.922e-2338.39Peroxidase 51 OS=Arabidopsis thaliana GN=PER51 PE=... [more]
PERA2_ARMRU8.373e-2348.25Peroxidase A2 OS=Armoracia rusticana GN=HRPA2 PE=1... [more]
PER42_ARATH2.872e-2235.40Peroxidase 42 OS=Arabidopsis thaliana GN=PER42 PE=... [more]

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Properties
Property NameValue
Genbank descriptionC34105F04EF PostHarvP1 Citrus clementina cDNA clone C34105F04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931485 ID=FC931485; Name=FC931485; organism=Citrus clementina; type=EST; length=754bp
GAACCCAAAGCGAGGTAATCAACAATGGCAACTGCTTCAGCTTCTTCTTT
CATTTCTCTTCTTTTGATATCTTCTCTTTTGCTTGCTTCTTTCACTGAGG
CACAAAAGCCCCCAGTAGCGAAAGGTCTCTCATGGACTTTTTATGACCAG
AGCTGTCCCAAGCTTGAATCCATTGTCAGAAAACAGATCCAAAATGCCCT
GAAAAAAGATATCGGCCTAGCTGCTGGCTTGATTCGCATCCATTTCCACG
ATTGCTTCGTTCAGGGATGTGATGGATCAGTGTTGCTAGAGGGATCAACT
AGTGAGCAAAATGCACGTCCAAACCTAAGCTTAAGGAAGGAGGCTTTAAA
ATTTGTAGACGATCTTCGTGCTCGTGTTCACAAGGAGTGTGGCAGAGTTG
TTTCTTGTGCTGATATTCTTGCCCTTGCTGCTCGCGATTCTGTTGCCTTG
TCTGGAGGGCAAATTACGACCTACCATTGGGAAGGCGAGACAGCAAAACA
TTCGCAACAGTGGTAAATCTGCCATCACCGTTCAGCAACACCACCGTGAT
CCTCAACGATTTCCGAGAAAAAACCTTCAACGCCAGGGAAACCGTGGCCC
TCTCCGGCGGGCACACCGTTGGGCTAGCTCACTGCCCTGCATTCACCAAT
CGCCTCTATCCCAACAAGACCCCACACTGGACAAACATTCGCCAACATCT
CAAAAGACATGCCCACTTCGGATTCCAACACACACGTCTTCGACATCGGT
CCCG
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