FC931486
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC931486 vs. ExPASy Swiss-Prot
Match: RL2_HAEIN (50S ribosomal protein L2 OS=Haemophilus influenzae GN=rplB PE=3 SV=2) HSP 1 Score: 93.5893 bits (231), Expect = 1.128e-18 Identity = 62/183 (33.88%), Postives = 95/183 (51.91%), Query Frame = 3 Query: 165 FRSLDFGERNGYLKGVVAEIIHDPGRGAPLARVTFRHPFRYMKQKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAG-NAYHKFRVKRNCWPKVRGVAMNPVEHP 710 +R +DF + VV + +DP R A +A V ++ ++ +A +G+ G + G + + VGN LP+R+IP G+ V NVE G G +AR++G Y II+ + T R++ SG + + + C A IG+V + L KAG N + R P VRG AMNPV+HP Sbjct: 62 YRLIDFKRNKLDIPAVVERLEYDPNRSANIALVLYKDG-----ERRYILAPKGLSVGDQIQAGINSPIKVGNSLPMRNIPVGSTVHNVELKPGKGGQIARSAGAYVQIIAREGNYVTLRLR--SGEMRKVLAECVATIGEVGNSEHMLRVLGKAGANRWRGIR------PTVRGTAMNPVDHP 231
BLAST of FC931486 vs. ExPASy Swiss-Prot
Match: RL2_HAEIG (50S ribosomal protein L2 OS=Haemophilus influenzae (strain PittGG) GN=rplB PE=3 SV=1) HSP 1 Score: 93.5893 bits (231), Expect = 1.128e-18 Identity = 62/183 (33.88%), Postives = 95/183 (51.91%), Query Frame = 3 Query: 165 FRSLDFGERNGYLKGVVAEIIHDPGRGAPLARVTFRHPFRYMKQKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAG-NAYHKFRVKRNCWPKVRGVAMNPVEHP 710 +R +DF + VV + +DP R A +A V ++ ++ +A +G+ G + G + + VGN LP+R+IP G+ V NVE G G +AR++G Y II+ + T R++ SG + + + C A IG+V + L KAG N + R P VRG AMNPV+HP Sbjct: 62 YRLIDFKRNKLDIPAVVERLEYDPNRSANIALVLYKDG-----ERRYILAPKGLSVGDQIQAGINSPIKVGNSLPMRNIPVGSTVHNVELKPGKGGQIARSAGAYVQIIAREGNYVTLRLR--SGEMRKVLAECVATIGEVGNSEHMLRVLGKAGANRWRGIR------PTVRGTAMNPVDHP 231
BLAST of FC931486 vs. ExPASy Swiss-Prot
Match: RL2_HAEIE (50S ribosomal protein L2 OS=Haemophilus influenzae (strain PittEE) GN=rplB PE=3 SV=1) HSP 1 Score: 93.5893 bits (231), Expect = 1.128e-18 Identity = 62/183 (33.88%), Postives = 95/183 (51.91%), Query Frame = 3 Query: 165 FRSLDFGERNGYLKGVVAEIIHDPGRGAPLARVTFRHPFRYMKQKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAG-NAYHKFRVKRNCWPKVRGVAMNPVEHP 710 +R +DF + VV + +DP R A +A V ++ ++ +A +G+ G + G + + VGN LP+R+IP G+ V NVE G G +AR++G Y II+ + T R++ SG + + + C A IG+V + L KAG N + R P VRG AMNPV+HP Sbjct: 62 YRLIDFKRNKLDIPAVVERLEYDPNRSANIALVLYKDG-----ERRYILAPKGLSVGDQIQAGINSPIKVGNSLPMRNIPVGSTVHNVELKPGKGGQIARSAGAYVQIIAREGNYVTLRLR--SGEMRKVLAECVATIGEVGNSEHMLRVLGKAGANRWRGIR------PTVRGTAMNPVDHP 231
BLAST of FC931486 vs. ExPASy Swiss-Prot
Match: RL2_HAEI8 (50S ribosomal protein L2 OS=Haemophilus influenzae (strain 86-028NP) GN=rplB PE=3 SV=1) HSP 1 Score: 93.5893 bits (231), Expect = 1.128e-18 Identity = 62/183 (33.88%), Postives = 95/183 (51.91%), Query Frame = 3 Query: 165 FRSLDFGERNGYLKGVVAEIIHDPGRGAPLARVTFRHPFRYMKQKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAG-NAYHKFRVKRNCWPKVRGVAMNPVEHP 710 +R +DF + VV + +DP R A +A V ++ ++ +A +G+ G + G + + VGN LP+R+IP G+ V NVE G G +AR++G Y II+ + T R++ SG + + + C A IG+V + L KAG N + R P VRG AMNPV+HP Sbjct: 62 YRLIDFKRNKLDIPAVVERLEYDPNRSANIALVLYKDG-----ERRYILAPKGLSVGDQIQAGINSPIKVGNSLPMRNIPVGSTVHNVELKPGKGGQIARSAGAYVQIIAREGNYVTLRLR--SGEMRKVLAECVATIGEVGNSEHMLRVLGKAGANRWRGIR------PTVRGTAMNPVDHP 231
BLAST of FC931486 vs. ExPASy Swiss-Prot
Match: RL2_DELAS (50S ribosomal protein L2 OS=Delftia acidovorans (strain DSM 14801 / SPH-1) GN=rplB PE=3 SV=1) HSP 1 Score: 93.5893 bits (231), Expect = 1.128e-18 Identity = 73/234 (31.20%), Postives = 113/234 (48.29%), Query Frame = 3 Query: 30 YIHQPAAQAQSLSPS-KEMGRV----IRAQRKGAGSVFKSHTHHRKGPAQFRSLDFGERNGYLKGVVAEIIHDPGRGAPLARVTFRHPFRYMKQKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKR--NCWPKVRGVAMNPVEHP 710 ++H+ A A L P ++ GR I + KG G H HH +R +DF + V I +DP R A +A V + ++ IA + G + G +A + VGN LP+R+IP G+ + +E +G +AR++G A +++ + +V++ SG + + CRA IG+VA + + L KAG VKR P VRGV MNPV+HP Sbjct: 23 HLHKGAGFAPLLEPQHQKSGRNNNGHITTRHKGGG-----HKHH------YRVVDFKRTKDGIPAKVERIEYDPNRTAHIALVCYADG-----ERRYIIAPRNLEVGATIVSGSEAPIRVGNTLPIRNIPVGSTIHCIELKIGAGAQIARSAGTSATLLAR--EGIYAQVRMRSGEVRKVHIECRATIGEVANEEHSLRRLGKAG-------VKRWMGIRPTVRGVVMNPVDHP 231
BLAST of FC931486 vs. ExPASy Swiss-Prot
Match: RL2_CLONN (50S ribosomal protein L2 OS=Clostridium novyi (strain NT) GN=rplB PE=3 SV=1) HSP 1 Score: 93.5893 bits (231), Expect = 1.128e-18 Identity = 70/206 (33.98%), Postives = 98/206 (47.57%), Query Frame = 3 Query: 102 QRKGAGSVFKSHTHHRKGPAQ--FRSLDFGERNGYLKGVVAEIIHDPGRGAPLARVTFRHPFRYMKQKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYH-KFRVKRNCWPKVRGVAMNPVEHP 710 ++ G S K HR G A+ +R +DF + VA I +DP R A +A V + +K IA G+ G V G A + VGN LP+++IP G V+ NVE G L RA+G A +++ + ++LPSG + + CRA IG V+ + KAG H FR P VRG MNP +HP Sbjct: 39 KKAGRNSQGKITVRHRGGGAKRKYRIIDFKRTKDGIPAKVASIEYDPNRTAYIALVVYADG-----EKRYIIAPVGLKVGDVVMSGVDADIKVGNALPLKNIPVGTVIHNVELQAGKGAQLVRAAGSSAQLMA--KEGKYAILRLPSGEMRYVRIECRAAIGTVSNVTNDIINIGKAGRKRHLGFR------PTVRGSVMNPNDHP 231
BLAST of FC931486 vs. ExPASy Swiss-Prot
Match: RL2_CHLSY (50S ribosomal protein L2 OS=Chloroflexus aurantiacus (strain ATCC 29364 / DSM 637 / Y-400-fl) GN=rplB PE=3 SV=1) HSP 1 Score: 93.5893 bits (231), Expect = 1.128e-18 Identity = 71/212 (33.49%), Postives = 105/212 (49.53%), Query Frame = 3 Query: 87 RVIRAQRKGAGSVFKSH--THHRKGPAQ--FRSLDFGERNGYLKGVVAEIIHDPGRGAPLARVTFRHPFRYMKQKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHP 710 R+I RK AG + HR G + +R +DF + V I +DP R A +A + + +K IA G+ G V G A + VGN LP+ +IP G + N+E +G GVL R++G A +++ + D V++PSG ++I C A IGQV L KAG + ++ +R P+VRG AMNP +HP Sbjct: 32 RLIEPLRKKAGRNNQGRITVRHRGGGHKRFYRIIDFKRNKFGVPAKVQAIEYDPNRTARIALLAYADG-----EKRYIIAPLGLKVGDTVMSGPDAEIRVGNALPLSAIPLGTQIHNIELEIGRGGVLVRSAGTAAQLMA--KEGDYAIVRMPSGEMRMIHLRCMATIGQVGNVDHQNIRLGKAGRS--RWLGRR---PRVRGAAMNPRDHP 231
BLAST of FC931486 vs. ExPASy Swiss-Prot
Match: RL2_CHLAA (50S ribosomal protein L2 OS=Chloroflexus aurantiacus (strain ATCC 29366 / DSM 635 / J-10-fl) GN=rplB PE=3 SV=1) HSP 1 Score: 93.5893 bits (231), Expect = 1.128e-18 Identity = 71/212 (33.49%), Postives = 105/212 (49.53%), Query Frame = 3 Query: 87 RVIRAQRKGAGSVFKSH--THHRKGPAQ--FRSLDFGERNGYLKGVVAEIIHDPGRGAPLARVTFRHPFRYMKQKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHP 710 R+I RK AG + HR G + +R +DF + V I +DP R A +A + + +K IA G+ G V G A + VGN LP+ +IP G + N+E +G GVL R++G A +++ + D V++PSG ++I C A IGQV L KAG + ++ +R P+VRG AMNP +HP Sbjct: 32 RLIEPLRKKAGRNNQGRITVRHRGGGHKRFYRIIDFKRNKFGVPAKVQAIEYDPNRTARIALLAYADG-----EKRYIIAPLGLKVGDTVMSGPDAEIRVGNALPLSAIPLGTQIHNIELEIGRGGVLVRSAGTAAQLMA--KEGDYAIVRMPSGEMRMIHLRCMATIGQVGNVDHQNIRLGKAGRS--RWLGRR---PRVRGAAMNPRDHP 231
BLAST of FC931486 vs. ExPASy Swiss-Prot
Match: RL2_BACV8 (50S ribosomal protein L2 OS=Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154) GN=rplB PE=3 SV=1) HSP 1 Score: 93.5893 bits (231), Expect = 1.128e-18 Identity = 64/190 (33.68%), Postives = 94/190 (49.47%), Query Frame = 3 Query: 141 HHRKGPAQFRSLDFGERNGYLKGVVAEIIHDPGRGAPLARVTFRHPFRYMKQKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHP 710 H RK +R +DF + VV I +DP R A +A + + +K IA G+ G + G A +GN LP+ +IP G V+ N+E G L R++G++A + S + +KLPSG + I S C+A IG V G ++ L +G A + R P+ RGV MNPV+HP Sbjct: 58 HKRK----YRLIDFKRNKDGVPAVVKTIEYDPNRSARIALLFYADG-----EKRYIIAPNGLQVGSTLVSGANAAPEIGNALPLENIPVGTVIHNIELRPGQGAALVRSAGNFAQLTSR--EGKYCVIKLPSGEVRQILSACKATIGSV---GNSDHGLESSGKAGRTRWMGRR--PRNRGVVMNPVDHP 231
BLAST of FC931486 vs. ExPASy Swiss-Prot
Match: RK2_DAUCA (50S ribosomal protein L2, chloroplastic OS=Daucus carota GN=rpl2-A PE=3 SV=1) HSP 1 Score: 93.5893 bits (231), Expect = 1.128e-18 Identity = 62/191 (32.46%), Postives = 96/191 (50.26%), Query Frame = 3 Query: 144 HRKGPAQ--FRSLDFGERNGYLKGVVAEIIHDPGRGAPLARVTFRHPFRYMKQKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHP 710 HR G + +R +DF + G + I +DP R A + + + +K + G G + G + + +GN LP+ +P G + N+E G G LARA+G A +I+ + + +KLPSG ++I C A +GQV G +K L +AG+ ++ KR P VRGV MNPV+HP Sbjct: 51 HRGGGHKRLYRKIDFRRNEKDIYGRIVTIEYDPNRNAYICLIHYGDG-----EKRYILHPRGAIIGDTIVSGTEVPIKMGNALPLTDMPLGTAIHNIEITRGRGGQLARAAGAVAKLIA--KEGKSATLKLPSGEVRLISKNCSATVGQVGNVGVNQKSLGRAGS--KRWLGKR---PVVRGVVMNPVDHP 229 The following BLAST results are available for this feature:
BLAST of FC931486 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC931486 ID=FC931486; Name=FC931486; organism=Citrus clementina; type=EST; length=711bpback to top |