FC931486
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC931486 vs. ExPASy Swiss-Prot
Match: RL2_TROWT (50S ribosomal protein L2 OS=Tropheryma whipplei (strain Twist) GN=rplB PE=3 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 1.473e-18 Identity = 68/189 (35.98%), Postives = 95/189 (50.26%), Query Frame = 3 Query: 162 QFRSLDF--GERNGYLKGVVAEIIHDPGRGAPLARVTFRHPFRYMKQKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCW----PKVRGVAMNPVEHP 710 ++R +DF +++G +K VA I +DP R A +A + F K +A G+ G V G A + GN L +R IP G ++ VE G LAR++G + + D D +KLPSG +++ CRA IG+V G R L KAG R+ W P VRGVAMNPV+HP Sbjct: 61 RYRLVDFRRSDKDG-VKAKVAHIEYDPNRTARIALLHFLDG-----AKRYILAPSGLKQGDVVESGSSADIRPGNSLCIRDIPVGTILHAVELRPGQGAKLARSAGSSVRLSAK--DGDFAILKLPSGEIRMVSLSCRATIGEVGNGQRLNVSLGKAG---------RSRWCGVRPSVRGVAMNPVDHP 232
BLAST of FC931486 vs. ExPASy Swiss-Prot
Match: RL2_TROW8 (50S ribosomal protein L2 OS=Tropheryma whipplei (strain TW08/27) GN=rplB PE=3 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 1.473e-18 Identity = 68/189 (35.98%), Postives = 95/189 (50.26%), Query Frame = 3 Query: 162 QFRSLDF--GERNGYLKGVVAEIIHDPGRGAPLARVTFRHPFRYMKQKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCW----PKVRGVAMNPVEHP 710 ++R +DF +++G +K VA I +DP R A +A + F K +A G+ G V G A + GN L +R IP G ++ VE G LAR++G + + D D +KLPSG +++ CRA IG+V G R L KAG R+ W P VRGVAMNPV+HP Sbjct: 61 RYRLVDFRRSDKDG-VKAKVAHIEYDPNRTARIALLHFLDG-----AKRYILAPSGLKQGDVVESGSSADIRPGNSLCIRDIPVGTILHAVELRPGQGAKLARSAGSSVRLSAK--DGDFAILKLPSGEIRMVSLSCRATIGEVGNGQRLNVSLGKAG---------RSRWCGVRPSVRGVAMNPVDHP 232
BLAST of FC931486 vs. ExPASy Swiss-Prot
Match: RL2_SHEDO (50S ribosomal protein L2 OS=Shewanella denitrificans (strain OS217 / ATCC BAA-1090 / DSM 15013) GN=rplB PE=3 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 1.473e-18 Identity = 61/182 (33.52%), Postives = 92/182 (50.55%), Query Frame = 3 Query: 165 FRSLDFGERNGYLKGVVAEIIHDPGRGAPLARVTFRHPFRYMKQKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHP 710 +R +DF + V I +DP R A +A V + ++ +AA+GM +G + G + + GN +P+R+IP G+VV VE G +AR++G Y +I+ D ++L SG + +P CRA G+V + L KAG + R P VRGVAMNPV+HP Sbjct: 62 YRLIDFKRNKDGIPAKVERIEYDPNRTAHIALVLYADG-----ERRYILAAKGMKSGDPIQSGVGSEIKTGNSMPLRNIPVGSVVHAVEMKPGKGAQIARSAGAYVQVIAR--DGAYATLRLRSGEMRKVPVDCRATFGEVGNAEHMLRQLGKAG-----AKRWRGVRPTVRGVAMNPVDHP 231
BLAST of FC931486 vs. ExPASy Swiss-Prot
Match: RL2_RICBR (50S ribosomal protein L2 OS=Rickettsia bellii (strain RML369-C) GN=rplB PE=3 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 1.473e-18 Identity = 61/186 (32.80%), Postives = 92/186 (49.46%), Query Frame = 3 Query: 165 FRSLDFGERNGYLKGVVAEIIHDPGRGAPLARVTFRHPFRYMKQKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCW----PKVRGVAMNPVEHP 710 +R +DF + +V I +DP R A +A + + + +A + + G + K A + +GN LP+R IP G + NVE VG G +AR++G ++ D+ ++KL SG +++P C A IG V+ + L KAG RN W P VRGVAMNPV+HP Sbjct: 62 YRVIDFKRNKLDISAIVERIEYDPNRTAFIALIKYEDG-----EHAYILAPQKLVVGDKIISSKDADIKIGNCLPLRYIPIGTTLHNVEMKVGKGGQIARSAGTSVDLV--GKDSGYAQIKLKSGEFRLVPLDCMATIGTVSNPDQKNINLGKAG---------RNRWLGWRPHVRGVAMNPVDHP 231
BLAST of FC931486 vs. ExPASy Swiss-Prot
Match: RL2_RICB8 (50S ribosomal protein L2 OS=Rickettsia bellii (strain OSU 85-389) GN=rplB PE=3 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 1.473e-18 Identity = 61/186 (32.80%), Postives = 92/186 (49.46%), Query Frame = 3 Query: 165 FRSLDFGERNGYLKGVVAEIIHDPGRGAPLARVTFRHPFRYMKQKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCW----PKVRGVAMNPVEHP 710 +R +DF + +V I +DP R A +A + + + +A + + G + K A + +GN LP+R IP G + NVE VG G +AR++G ++ D+ ++KL SG +++P C A IG V+ + L KAG RN W P VRGVAMNPV+HP Sbjct: 62 YRVIDFKRNKLDISAIVERIEYDPNRTAFIALIKYEDG-----EHAYILAPQKLVVGDKIISSKDADIKIGNCLPLRYIPIGTTLHNVEMKVGKGGQIARSAGTSVDLV--GKDSGYAQIKLKSGEFRLVPLDCMATIGTVSNPDQKNINLGKAG---------RNRWLGWRPHVRGVAMNPVDHP 231
BLAST of FC931486 vs. ExPASy Swiss-Prot
Match: RL2_MOOTA (50S ribosomal protein L2 OS=Moorella thermoacetica (strain ATCC 39073) GN=rplB PE=3 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 1.473e-18 Identity = 65/191 (34.03%), Postives = 96/191 (50.26%), Query Frame = 3 Query: 144 HRKGPAQ--FRSLDFGERNGYLKGVVAEIIHDPGRGAPLARVTFRHPFRYMKQKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHP 710 HR G + +R +DF + G VA I +DP R A +A + + +K +A E + G V G +A + VGN LP+ IP G +V NVE G G +AR++G A +++ + ++LPSG + + CRA +GQV G + + G A K + P VRGV MNPV+HP Sbjct: 53 HRGGGHKRLYRVIDFKRDKDGIPGRVATIEYDPNRSANIALINYADG-----EKRYILAPENLQVGDQVISGPEADIKVGNALPLSQIPVGTMVHNVELKPGKGGQMARSAGAGAQLMA--KEGGYALLRLPSGEVRKVQESCRATVGQV---GNLDWENINIGKAGRKRWL--GIRPTVRGVVMNPVDHP 231
BLAST of FC931486 vs. ExPASy Swiss-Prot
Match: RL2_MICAN (50S ribosomal protein L2 OS=Microcystis aeruginosa (strain NIES-843) GN=rplB PE=3 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 1.473e-18 Identity = 65/193 (33.68%), Postives = 93/193 (48.19%), Query Frame = 3 Query: 138 THHRKGPAQ--FRSLDFGERNGYLKGVVAEIIHDPGRGAPLARVTFRHPFRYMKQKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHP 710 + HR G + +R +DF + VA I +DP R A +A + ++ +K IA G+ G V G+ A VGN LP+ IP G V N+E G G + RA+G +A +++ + D ++LPS ++I C A IG+V L KAG H R P VRG MNPV+HP Sbjct: 51 SRHRGGGHKRLYRIIDFRRDKRDIPAKVAAIEYDPNRNARIALLFYKDG-----EKRYIIAPAGLGVGDTVIAGENAPFEVGNALPLSRIPLGTEVHNIELVPGRGGQMVRAAGGFAQVVA--KEGDYVTIRLPSKEVRMIRRECYATIGKVGNAEARNISLGKAGRTRH-----RGQRPHVRGSVMNPVDHP 231
BLAST of FC931486 vs. ExPASy Swiss-Prot
Match: RL2_METEP (50S ribosomal protein L2 OS=Methylobacterium extorquens (strain PA1) GN=rplB PE=3 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 1.473e-18 Identity = 63/186 (33.87%), Postives = 94/186 (50.54%), Query Frame = 3 Query: 168 RSLDFGER-NGYLKGVVAEIIHDPGRGAPLARVTFRHPFRYMKQKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCW----PKVRGVAMNPVEHP 710 R++DF R N + V I +DP R A +A +TF ++ +A + + G V G+ + GN P+ S+P G +V NVE +G G +AR++G+YA I+ D ++L SG ++++ C A +G V+ L KAG RN W P VRGVAMNPV+HP Sbjct: 63 RNVDFKRRENLNVPATVERIEYDPNRTAFIALITFPDG-----KQSYILAPQRLSPGDKVIAGESVDVKPGNAAPIGSMPVGTIVHNVELKIGKGGAIARSAGNYAQIVGR--DQGYVTLRLNSGEQRLVHGQCFATVGAVSNPDHMNISLGKAG---------RNRWLGKRPHVRGVAMNPVDHP 232
BLAST of FC931486 vs. ExPASy Swiss-Prot
Match: RL2_METC4 (50S ribosomal protein L2 OS=Methylobacterium chloromethanicum (strain CM4 / NCIMB 13688) GN=rplB PE=3 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 1.473e-18 Identity = 63/186 (33.87%), Postives = 94/186 (50.54%), Query Frame = 3 Query: 168 RSLDFGER-NGYLKGVVAEIIHDPGRGAPLARVTFRHPFRYMKQKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCW----PKVRGVAMNPVEHP 710 R++DF R N + V I +DP R A +A +TF ++ +A + + G V G+ + GN P+ S+P G +V NVE +G G +AR++G+YA I+ D ++L SG ++++ C A +G V+ L KAG RN W P VRGVAMNPV+HP Sbjct: 63 RNVDFKRRENLNVPATVERIEYDPNRTAFIALITFPDG-----KQSYILAPQRLSPGDKVIAGESVDVKPGNAAPIGSMPVGTIVHNVELKIGKGGAIARSAGNYAQIVGR--DQGYVTLRLNSGEQRLVHGQCFATVGAVSNPDHMNISLGKAG---------RNRWLGKRPHVRGVAMNPVDHP 232
BLAST of FC931486 vs. ExPASy Swiss-Prot
Match: RL2_LACLS (50S ribosomal protein L2 OS=Lactococcus lactis subsp. cremoris (strain SK11) GN=rplB PE=3 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 1.473e-18 Identity = 65/191 (34.03%), Postives = 94/191 (49.21%), Query Frame = 3 Query: 141 HHRKG-PAQFRSLDFGERNGYLKGVVAEIIHDPGRGAPLARVTFRHPFRYMKQKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHP 710 HH G ++R +DF + VA I +DP R A +A + + + K +AA+G+ G V G A + VGN LP+ +IP G ++ N+E G G L R++G A ++ + T V+L SG ++I S CRA IG V ++ L KAG H P VRG MNP +HP Sbjct: 53 HHGGGHKRKYRMIDFKRTTDNVVAKVATIEYDPNRTANIALIVYANGV-----KSYILAAKGLEVGMTVVSGPDADIKVGNALPLANIPVGTLIHNIELKPGKGGQLVRSAGASAQVL--GSEGKYTLVRLQSGEVRMILSTCRATIGVVGNEQQSLINLGKAGRTRH-----MGIRPTVRGSVMNPNDHP 231 The following BLAST results are available for this feature:
BLAST of FC931486 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC931486 ID=FC931486; Name=FC931486; organism=Citrus clementina; type=EST; length=711bpback to top |