FC931486
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC931486 vs. ExPASy Swiss-Prot
Match: RL2_LACLM (50S ribosomal protein L2 OS=Lactococcus lactis subsp. cremoris (strain MG1363) GN=rplB PE=3 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 1.473e-18 Identity = 65/191 (34.03%), Postives = 94/191 (49.21%), Query Frame = 3 Query: 141 HHRKG-PAQFRSLDFGERNGYLKGVVAEIIHDPGRGAPLARVTFRHPFRYMKQKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHP 710 HH G ++R +DF + VA I +DP R A +A + + + K +AA+G+ G V G A + VGN LP+ +IP G ++ N+E G G L R++G A ++ + T V+L SG ++I S CRA IG V ++ L KAG H P VRG MNP +HP Sbjct: 53 HHGGGHKRKYRMIDFKRTTDNVVAKVATIEYDPNRTANIALIVYANGV-----KSYILAAKGLEVGMTVVSGPDADIKVGNALPLANIPVGTLIHNIELKPGKGGQLVRSAGASAQVL--GSEGKYTLVRLQSGEVRMILSTCRATIGVVGNEQQSLINLGKAGRTRH-----MGIRPTVRGSVMNPNDHP 231
BLAST of FC931486 vs. ExPASy Swiss-Prot
Match: RL2_BUCAT (50S ribosomal protein L2 OS=Buchnera aphidicola subsp. Acyrthosiphon pisum (strain Tuc7) GN=rplB PE=3 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 1.473e-18 Identity = 58/182 (31.87%), Postives = 93/182 (51.10%), Query Frame = 3 Query: 165 FRSLDFGERNGYLKGVVAEIIHDPGRGAPLARVTFRHPFRYMKQKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHP 710 +R +DF + V +DP R + +A + ++ +++ +A +G+ G + G +A + GN LP+++IP G V NVE G G +AR++G Y +++ D + ++L SG + S CRA IG+V K L KAG A ++ P VRG AMNPV+HP Sbjct: 62 YRIVDFKRNKDDIGATVERFEYDPNRSSNIALILYKDG-----ERKYILAPKGIKIGDTIISGLRAPIKTGNTLPLKNIPVGTFVHNVELKPGKGGQIARSAGSYVQLVAF--DEEYATLRLRSGEMRKTQSNCRATIGEVGNSEHMLKVLGKAG-ASRWIGIR----PTVRGTAMNPVDHP 231
BLAST of FC931486 vs. ExPASy Swiss-Prot
Match: RL2_BUCAI (50S ribosomal protein L2 OS=Buchnera aphidicola subsp. Acyrthosiphon pisum GN=rplB PE=3 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 1.473e-18 Identity = 58/182 (31.87%), Postives = 93/182 (51.10%), Query Frame = 3 Query: 165 FRSLDFGERNGYLKGVVAEIIHDPGRGAPLARVTFRHPFRYMKQKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHP 710 +R +DF + V +DP R + +A + ++ +++ +A +G+ G + G +A + GN LP+++IP G V NVE G G +AR++G Y +++ D + ++L SG + S CRA IG+V K L KAG A ++ P VRG AMNPV+HP Sbjct: 62 YRIVDFKRNKDDIGATVERFEYDPNRSSNIALILYKDG-----ERKYILAPKGIKIGDTIISGLRAPIKTGNTLPLKNIPVGTFVHNVELKPGKGGQIARSAGSYVQLVAF--DEEYATLRLRSGEMRKTQSNCRATIGEVGNSEHMLKVLGKAG-ASRWIGIR----PTVRGTAMNPVDHP 231
BLAST of FC931486 vs. ExPASy Swiss-Prot
Match: RL2_BUCA5 (50S ribosomal protein L2 OS=Buchnera aphidicola subsp. Acyrthosiphon pisum (strain 5A) GN=rplB PE=3 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 1.473e-18 Identity = 58/182 (31.87%), Postives = 93/182 (51.10%), Query Frame = 3 Query: 165 FRSLDFGERNGYLKGVVAEIIHDPGRGAPLARVTFRHPFRYMKQKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHP 710 +R +DF + V +DP R + +A + ++ +++ +A +G+ G + G +A + GN LP+++IP G V NVE G G +AR++G Y +++ D + ++L SG + S CRA IG+V K L KAG A ++ P VRG AMNPV+HP Sbjct: 62 YRIVDFKRNKDDIGATVERFEYDPNRSSNIALILYKDG-----ERKYILAPKGIKIGDTIISGLRAPIKTGNTLPLKNIPVGTFVHNVELKPGKGGQIARSAGSYVQLVAF--DEEYATLRLRSGEMRKTQSNCRATIGEVGNSEHMLKVLGKAG-ASRWIGIR----PTVRGTAMNPVDHP 231
BLAST of FC931486 vs. ExPASy Swiss-Prot
Match: RL2_BLOFL (50S ribosomal protein L2 OS=Blochmannia floridanus GN=rplB PE=3 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 1.473e-18 Identity = 58/183 (31.69%), Postives = 92/183 (50.27%), Query Frame = 3 Query: 162 QFRSLDFGERNGYLKGVVAEIIHDPGRGAPLARVTFRHPFRYMKQKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHP 710 ++R +DF + VV + +DP R A +A + ++ ++ +A + G + G + GN LP+ +IP G+++ NVE VG G LAR++G Y I+S D + ++L SG + + CRA IG+V + L KAG + R P VRG AMNP++HP Sbjct: 63 RYRIIDFKRNKDDVFAVVERMEYDPNRSANIALIVYKDG-----ERRYILAPRNLNVGNKIISGLNVPISPGNSLPLSNIPVGSIIHNVEMKVGKGGQLARSAGTYVQIVSR--DGEYIILRLRSGEIRKVRCECRATIGEVGNNEHMLRALGKAGASRW-----RGIRPTVRGTAMNPIDHP 233
BLAST of FC931486 vs. ExPASy Swiss-Prot
Match: RL2_BACFR (50S ribosomal protein L2 OS=Bacteroides fragilis GN=rplB PE=3 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 1.473e-18 Identity = 64/189 (33.86%), Postives = 93/189 (49.21%), Query Frame = 3 Query: 144 HRKGPAQFRSLDFGERNGYLKGVVAEIIHDPGRGAPLARVTFRHPFRYMKQKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHP 710 HRK R +DF + VV I +DP R A +A + + +K IA G+ G + G+ A +GN LP+++IP G V+ N+E G L R++G++A + S + +KLPSG + I S C+A IG V + KAG + + R RN RGV MNPV+HP Sbjct: 58 HRK---VIRIVDFKRNKDGVPAVVKTIEYDPNRSARIALLFYADG-----EKRYIIAPNGLQVGATLMSGENAAPEIGNALPLQNIPVGTVIHNIELRPGQGAALVRSAGNFAQLTSR--EGKYCVIKLPSGEVRQILSTCKATIGSVGNSDHGLESSGKAGRSRWQGRRPRN-----RGVVMNPVDHP 231
BLAST of FC931486 vs. ExPASy Swiss-Prot
Match: RL2_BACFN (50S ribosomal protein L2 OS=Bacteroides fragilis (strain ATCC 25285 / NCTC 9343) GN=rplB PE=3 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 1.473e-18 Identity = 64/189 (33.86%), Postives = 93/189 (49.21%), Query Frame = 3 Query: 144 HRKGPAQFRSLDFGERNGYLKGVVAEIIHDPGRGAPLARVTFRHPFRYMKQKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHP 710 HRK R +DF + VV I +DP R A +A + + +K IA G+ G + G+ A +GN LP+++IP G V+ N+E G L R++G++A + S + +KLPSG + I S C+A IG V + KAG + + R RN RGV MNPV+HP Sbjct: 58 HRK---VIRIVDFKRNKDGVPAVVKTIEYDPNRSARIALLFYADG-----EKRYIIAPNGLQVGATLMSGENAAPEIGNALPLQNIPVGTVIHNIELRPGQGAALVRSAGNFAQLTSR--EGKYCVIKLPSGEVRQILSTCKATIGSVGNSDHGLESSGKAGRSRWQGRRPRN-----RGVVMNPVDHP 231
BLAST of FC931486 vs. ExPASy Swiss-Prot
Match: RK2_EMIHU (50S ribosomal protein L2, chloroplastic OS=Emiliania huxleyi GN=rpl2 PE=3 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 1.473e-18 Identity = 65/190 (34.21%), Postives = 98/190 (51.58%), Query Frame = 3 Query: 141 HHRKGPAQFRSLDFGERNGYLKGVVAEIIHDPGRGAPLARVTFRHPFRYMKQKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHP 710 H RK R +DF ++ VA I +DP R A +A + + + K +A + G V G +A + +GN LP+ +IP G+ V N+E +G G +AR++G YA II+ + D +KLPS +++ C A +GQV L KAG + ++ KR PKVRGV NP++HP Sbjct: 58 HKRK----HRIIDFKRKSIATTARVATIEYDPNRNARIALLHYENGL-----KRYILAPRSLKVGMEVCSGPEAPIEIGNSLPLAAIPLGSTVHNIELTLGKGGQIARSAGTYAQIIA--KEGDFVTLKLPSNEVRLVYKECYATLGQVGNIDAINTCLGKAGRS--RWLGKR---PKVRGVVKNPIDHP 231
BLAST of FC931486 vs. ExPASy Swiss-Prot
Match: RK2B_ATRBE (50S ribosomal protein L2-B, chloroplastic OS=Atropa belladonna GN=rpl2-B PE=3 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 1.473e-18 Identity = 63/207 (30.43%), Postives = 101/207 (48.79%), Query Frame = 3 Query: 90 VIRAQRKGAGSVFKSHTHHRKGPAQFRSLDFGERNGYLKGVVAEIIHDPGRGAPLARVTFRHPFRYMKQKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHP 710 +I A+ +G G H++ +R +DF + G + I +DP R A + + + +K + G G + G + + +GN LP+ +P G + N+E +G G LARA+G +I+ + + +KLPSG ++I C A +GQV G +K L +AG+ ++ KR P VRGV MNPV HP Sbjct: 46 IITARHRGGG--------HKR---LYRKIDFRRNEKDIYGRIVTIEYDPNRNAYICLIHYGDG-----EKRYILHPRGAIIGDTIVSGTEVPIKMGNALPLTDMPLGTAIHNIEITLGKGGQLARAAGAVPKLIA--KEGKSATLKLPSGEVRLISKNCSATVGQVGNVGVNQKSLGRAGS--KRWLGKR---PVVRGVVMNPVNHP 229
BLAST of FC931486 vs. ExPASy Swiss-Prot
Match: RM02_RECAM (60S ribosomal protein L2, mitochondrial OS=Reclinomonas americana GN=RPL2 PE=3 SV=2) HSP 1 Score: 92.8189 bits (229), Expect = 1.924e-18 Identity = 66/213 (30.99%), Postives = 109/213 (51.17%), Query Frame = 3 Query: 81 MGRVIRAQRKGAGSVFKSHTHHRKG--PAQFRSLDFGERNGYLKGVVAEIIHDPGRGAPLARVTFR-HPFRYMKQKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHP 710 +G + A R G + +HR G ++R +DF N + G+V + +DP R +A + + F Y+ +A + G V G + +GN LP+R+IP G ++ N+E + G G + R++G A +IS + +N +KLPSG ++ P+ A IG ++ + KAG + ++ +R P VRGVAMNPV+HP Sbjct: 35 VGMIESAGRNNTGRIT---VYHRGGGHKTKYRYIDFKRSNYNIPGIVERLEYDPNRTCFIALIKDNENNFSYI------LAPHDLKVGDTVITGNDIDIRIGNTLPLRNIPIGTMIHNIELNPGKGGKIVRSAGSSAQLISKD-ENGFCMLKLPSGEYRLFPNNSLATIGILSNIDNKNIKIGKAGRS--RWMGRR---PIVRGVAMNPVDHP 232 The following BLAST results are available for this feature:
BLAST of FC931486 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC931486 ID=FC931486; Name=FC931486; organism=Citrus clementina; type=EST; length=711bpback to top |