FC931486
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC931486 vs. ExPASy Swiss-Prot
Match: RL2_CLOTE (50S ribosomal protein L2 OS=Clostridium tetani GN=rplB PE=3 SV=2) HSP 1 Score: 92.8189 bits (229), Expect = 1.924e-18 Identity = 66/202 (32.67%), Postives = 96/202 (47.52%), Query Frame = 3 Query: 111 GAGSVFKSHTHHRKGPAQ--FRSLDFGERNGYLKGVVAEIIHDPGRGAPLARVTFRHPFRYMKQKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHP 710 G S K HR G A+ +R +DF + VA I +DP R A +A V + +K IA +G+ G + G A + GN LP+++IP G V N+E G L R++G A +++ + + +KLPSG + + CRA IG V+ + KAG + K P VRG AMNP +HP Sbjct: 42 GRNSQGKITVRHRGGGAKRKYRIIDFKRDKDGIPAKVATIEYDPNRTAFIALVVYTDG-----EKRYIIAPQGLKVGDVIVSGPDADIKAGNCLPIKNIPVGTFVHNIELASGKGAQLVRSAGGSAQLMA--KEGNYATIKLPSGETRYVRIECRATIGTVSNVKHEIMSIGKAGR-----KRKMGFRPTVRGSAMNPCDHP 231
BLAST of FC931486 vs. ExPASy Swiss-Prot
Match: RL2_ACIBL (50S ribosomal protein L2 OS=Acidobacteria bacterium (strain Ellin345) GN=rplB PE=3 SV=1) HSP 1 Score: 92.8189 bits (229), Expect = 1.924e-18 Identity = 69/209 (33.01%), Postives = 99/209 (47.37%), Query Frame = 3 Query: 105 RKGAGSVFKSHT---HHRKGPAQFRSLDFGERNGYLKGVVAEIIHDPGRGAPLARVTFRHPFRYMKQKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCW----PKVRGVAMNPVEHP 710 R+ AG + H H RK R +DF + VA + +DP R A +A + + +K + G+ GQ V G A ++VGN LP+R+IP G VV N+E G +AR++G A +++ ++D +KLPSG + + C A IGQV + KAG R W P RGV MNPV+HP Sbjct: 43 RRNAGDITIWHRGGGHKRK----LRLIDFKRDKSGVPATVATVEYDPNRSANIALLHYADG-----EKRYILHPVGLKVGQKVVSGPDADILVGNALPLRNIPAGTVVHNIELKPGKGAQMARSAGAQAQLVA--KESDYALLKLPSGETRRVLVDCMATIGQVGNLDYENVAIGKAG---------RTRWMGVRPTNRGVVMNPVDHP 231
BLAST of FC931486 vs. ExPASy Swiss-Prot
Match: RL2_ACIAC (50S ribosomal protein L2 OS=Acidovorax avenae subsp. citrulli (strain AAC00-1) GN=rplB PE=3 SV=1) HSP 1 Score: 92.8189 bits (229), Expect = 1.924e-18 Identity = 67/208 (32.21%), Postives = 101/208 (48.56%), Query Frame = 3 Query: 93 IRAQRKGAGSVFKSHTHHRKGPAQFRSLDFGERNGYLKGVVAEIIHDPGRGAPLARVTFRHPFRYMKQKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKR--NCWPKVRGVAMNPVEHP 710 I + KG G H HH +R +DF + V I +DP R A +A V + ++ IA + G + G +A + VGN LP+R+IP G+ + +E G +AR++G A +++ + +V++ SG + I CRA IG+VA + + L KAG VKR P VRGVAMNP++HP Sbjct: 49 ITTRHKGGG-----HKHH------YRVVDFKRNKDAIPAKVERIEYDPNRTAHIALVCYADG-----ERRYIIAPRNLEVGATIVSGSEAPIRVGNTLPIRNIPVGSTIHCIELKPGAGAQIARSAGTSATLLAR--EGTYAQVRMRSGEVRRIHIECRATIGEVANEEHSLRQLGKAG-------VKRWMGIRPTVRGVAMNPIDHP 231
BLAST of FC931486 vs. ExPASy Swiss-Prot
Match: RK2_PEA (50S ribosomal protein L2, chloroplastic OS=Pisum sativum GN=rpl2 PE=3 SV=1) HSP 1 Score: 92.8189 bits (229), Expect = 1.924e-18 Identity = 62/191 (32.46%), Postives = 96/191 (50.26%), Query Frame = 3 Query: 144 HRKGPAQ--FRSLDFGERNGYLKGVVAEIIHDPGRGAPLARVTFRHPFRYMKQKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHP 710 HR G + +R +DF + G + I +DP R A + + Y ++ +I G + G + + +GN LP+ +P G + N+E +G G LARA+G A +I+ + + +KLPSG ++I C A +GQV G +K L + G ++R KR P VRGV MNPV+HP Sbjct: 51 HRGGGHKRLYRKIDFRRNEKDIYGRIITIEYDPNRNAHICLI------HYGDGEKRYILHPKAIIGDTIVYGTEVPIKMGNALPLTDMPLGTAIHNIEITLGKGGQLARAAGAVAKLIA--KEGKSATLKLPSGEVRLISKNCSATVGQVGNVGVNQKSLGRVG--AKRWRGKR---PVVRGVVMNPVDHP 228
BLAST of FC931486 vs. ExPASy Swiss-Prot
Match: RK2_OENPA (50S ribosomal protein L2, chloroplastic OS=Oenothera parviflora GN=rpl2-A PE=3 SV=1) HSP 1 Score: 92.8189 bits (229), Expect = 1.924e-18 Identity = 63/191 (32.98%), Postives = 99/191 (51.83%), Query Frame = 3 Query: 144 HRKGPAQ--FRSLDFGERNGYLKGVVAEIIHDPGRGAPLARVTFRHPFRYMKQKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHP 710 HR G + +R +DF + G + I +DP R A + + + +K + G G + G + + +GN LP++ +P G + N+E +G G LARA+G A +I+ + T +KLPSG ++I + C A +GQV G +K L +AG+ ++ KR P VRGV MNPV+HP Sbjct: 51 HRGGGHKRLYRKIDFRRNERDIYGRIVSIEYDPNRNASICLIHYGDG-----EKRYILHPRGAIIGDTIVSGTEVPIKMGNALPLK-MPLGTALHNIEITLGKGGQLARAAGAVAKLIAKEGKSAT--LKLPSGEVRLISNNCSATVGQVGNVGVNQKSLGRAGS--KRWLGKR---PVVRGVVMNPVDHP 228
BLAST of FC931486 vs. ExPASy Swiss-Prot
Match: RK2_OENGL (50S ribosomal protein L2, chloroplastic OS=Oenothera glazioviana GN=rpl2-A PE=3 SV=1) HSP 1 Score: 92.8189 bits (229), Expect = 1.924e-18 Identity = 63/191 (32.98%), Postives = 99/191 (51.83%), Query Frame = 3 Query: 144 HRKGPAQ--FRSLDFGERNGYLKGVVAEIIHDPGRGAPLARVTFRHPFRYMKQKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHP 710 HR G + +R +DF + G + I +DP R A + + + +K + G G + G + + +GN LP++ +P G + N+E +G G LARA+G A +I+ + T +KLPSG ++I + C A +GQV G +K L +AG+ ++ KR P VRGV MNPV+HP Sbjct: 51 HRGGGHKRLYRKIDFRRNERDIYGRIVSIEYDPNRNASICLIHYGDG-----EKRYILHPRGAIIGDTIVSGTEVPIKMGNALPLK-MPLGTALHNIEITLGKGGQLARAAGAVAKLIAKEGKSAT--LKLPSGEVRLISNNCSATVGQVGNVGVNQKSLGRAGS--KRWLGKR---PVVRGVVMNPVDHP 228
BLAST of FC931486 vs. ExPASy Swiss-Prot
Match: RK2_OENEH (50S ribosomal protein L2, chloroplastic OS=Oenothera elata subsp. hookeri GN=rpl2-A PE=3 SV=2) HSP 1 Score: 92.8189 bits (229), Expect = 1.924e-18 Identity = 63/191 (32.98%), Postives = 99/191 (51.83%), Query Frame = 3 Query: 144 HRKGPAQ--FRSLDFGERNGYLKGVVAEIIHDPGRGAPLARVTFRHPFRYMKQKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHP 710 HR G + +R +DF + G + I +DP R A + + + +K + G G + G + + +GN LP++ +P G + N+E +G G LARA+G A +I+ + T +KLPSG ++I + C A +GQV G +K L +AG+ ++ KR P VRGV MNPV+HP Sbjct: 51 HRGGGHKRLYRKIDFRRNERDIYGRIVSIEYDPNRNASICLIHYGDG-----EKRYILHPRGAIIGDTIVSGTEVPIKMGNALPLK-MPLGTALHNIEITLGKGGQLARAAGAVAKLIAKEGKSAT--LKLPSGEVRLISNNCSATVGQVGNVGVNQKSLGRAGS--KRWLGKR---PVVRGVVMNPVDHP 228
BLAST of FC931486 vs. ExPASy Swiss-Prot
Match: RK2_OENBI (50S ribosomal protein L2, chloroplastic OS=Oenothera biennis GN=rpl2-A PE=3 SV=1) HSP 1 Score: 92.8189 bits (229), Expect = 1.924e-18 Identity = 63/191 (32.98%), Postives = 99/191 (51.83%), Query Frame = 3 Query: 144 HRKGPAQ--FRSLDFGERNGYLKGVVAEIIHDPGRGAPLARVTFRHPFRYMKQKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHP 710 HR G + +R +DF + G + I +DP R A + + + +K + G G + G + + +GN LP++ +P G + N+E +G G LARA+G A +I+ + T +KLPSG ++I + C A +GQV G +K L +AG+ ++ KR P VRGV MNPV+HP Sbjct: 51 HRGGGHKRLYRKIDFRRNERDIYGRIVSIEYDPNRNASICLIHYGDG-----EKRYILHPRGAIIGDTIVSGTEVPIKMGNALPLK-MPLGTALHNIEITLGKGGQLARAAGAVAKLIAKEGKSAT--LKLPSGEVRLISNNCSATVGQVGNVGVNQKSLGRAGS--KRWLGKR---PVVRGVVMNPVDHP 228
BLAST of FC931486 vs. ExPASy Swiss-Prot
Match: RK2_OENAR (50S ribosomal protein L2, chloroplastic OS=Oenothera argillicola GN=rpl2-A PE=3 SV=1) HSP 1 Score: 92.8189 bits (229), Expect = 1.924e-18 Identity = 63/191 (32.98%), Postives = 99/191 (51.83%), Query Frame = 3 Query: 144 HRKGPAQ--FRSLDFGERNGYLKGVVAEIIHDPGRGAPLARVTFRHPFRYMKQKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHP 710 HR G + +R +DF + G + I +DP R A + + + +K + G G + G + + +GN LP++ +P G + N+E +G G LARA+G A +I+ + T +KLPSG ++I + C A +GQV G +K L +AG+ ++ KR P VRGV MNPV+HP Sbjct: 51 HRGGGHKRLYRKIDFRRNERDIYGRIVSIEYDPNRNASICLIHYGDG-----EKRYILHPRGAIIGDTIVSGTEVPIKMGNALPLK-MPLGTALHNIEITLGKGGQLARAAGAVAKLIAKEGKSAT--LKLPSGEVRLISNNCSATVGQVGNVGVNQKSLGRAGS--KRWLGKR---PVVRGVVMNPVDHP 228
BLAST of FC931486 vs. ExPASy Swiss-Prot
Match: RK2_MARPO (50S ribosomal protein L2, chloroplastic OS=Marchantia polymorpha GN=rpl2 PE=3 SV=1) HSP 1 Score: 92.8189 bits (229), Expect = 1.924e-18 Identity = 60/207 (28.99%), Postives = 101/207 (48.79%), Query Frame = 3 Query: 90 VIRAQRKGAGSVFKSHTHHRKGPAQFRSLDFGERNGYLKGVVAEIIHDPGRGAPLARVTFRHPFRYMKQKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHP 710 +I +Q +G G H++ +R +DF Y+ G + I +DP R + + + +K + G+ + ++A +++GN LP+ ++P G + N+E G G L RA+G A II+ + ++LPSG ++I C A IGQ+ G + L+ G A K + + PKVRGV MNP++HP Sbjct: 48 IITSQHRGGG--------HKR---LYRKIDFQRNKKYITGKIKTIEYDPNRNTYICLINYEDG-----EKRYILYPRGIKLDDTIISSEEAPILIGNTLPLTNMPLGTAIHNIEITPGKGGQLVRAAGTVAKIIA--KEGQLVTLRLPSGEIRLISQKCLATIGQI---GNVDVNNLRIGKAGSKRWLGKR--PKVRGVVMNPIDHP 231 The following BLAST results are available for this feature:
BLAST of FC931486 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC931486 ID=FC931486; Name=FC931486; organism=Citrus clementina; type=EST; length=711bpback to top |