FC931490

Overview
NameFC931490
Unique NameFC931490
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length733
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC931490 vs. ExPASy Swiss-Prot
Match: NRAM1_HUMAN (Natural resistance-associated macrophage protein 1 OS=Homo sapiens GN=SLC11A1 PE=1 SV=1)

HSP 1 Score: 192.971 bits (489), Expect = 1.427e-48
Identity = 110/219 (50.23%), Postives = 144/219 (65.75%), Query Frame = 3
Query:   72 QAVGVVGCIIMPHNVFLHSALVQSRDIDNSKKGRVQEALRYYSIESTIALVVSFMINLFVTTVFAKGFY-GTEQA-------------NNIGLVNAGQYLQEKYGGGLF-------PILYIWGIGLLAAGQSSTITGTYAGQFIMGGFLNLRLKKWMRALITRSCAIVPTIIVALVFDTSEDMLDVLNEWLNVLQSVQIPFALIPLLYLVSQEHIMGTF 665
            QAVG+VG IIMPHN++LHSALV+SR+ID +++  ++EA  Y+ IE+TIAL VSF+INLFV  VF + FY  T QA               I  +N      + Y GG+          LYIW IGLLAAGQSST+TGTYAGQF+M GFL LR  ++ R L+TRSCAI+PT++VA+  D  +  L  LN+ LNVLQS+ +PFA++P+L   S   +M  F
Sbjct:  243 QAVGIVGAIIMPHNIYLHSALVKSREIDRARRADIREANMYFLIEATIALSVSFIINLFVMAVFGQAFYQKTNQAAFNICANSSLHDYAKIFPMNNATVAVDIYQGGVILGCLFGPAALYIWAIGLLAAGQSSTMTGTYAGQFVMEGFLRLRWSRFARVLLTRSCAILPTVLVAVFRDLRD--LSGLNDLLNVLQSLLLPFAVLPILTFTSMPTLMQEF 459          
BLAST of FC931490 vs. ExPASy Swiss-Prot
Match: NRAM1_BOVIN (Natural resistance-associated macrophage protein 1 OS=Bos taurus GN=SLC11A1 PE=2 SV=1)

HSP 1 Score: 192.586 bits (488), Expect = 1.864e-48
Identity = 110/240 (45.83%), Postives = 154/240 (64.17%), Query Frame = 3
Query:   72 QAVGVVGCIIMPHNVFLHSALVQSRDIDNSKKGRVQEALRYYSIESTIALVVSFMINLFVTTVFAKGFYGTEQANNIGL-VNAGQYLQEK---------------YGGGLF-------PILYIWGIGLLAAGQSSTITGTYAGQFIMGGFLNLRLKKWMRALITRSCAIVPTIIVALVFDTSEDMLDVLNEWLNVLQSVQIPFALIPLLYLVSQEHIMGTFKLALY*DVSWLVLSGELIM 722
            QAVG++G IIMPHN++LHS+LV+SR++D S++  ++EA  Y+ IE+TIAL VSF+INLFV  VF + FY  +Q N     + A   L +                Y GG+        P LYIW +GLLAAGQSST+TGTYAGQF+M GFL LR  ++ R L+TRSCAI+PT+++A+  D  +  L  LN+ LNVLQS+ +PFA++P+L   S   +M  F   L   VS ++ S  +++
Sbjct:  240 QAVGIIGAIIMPHNIYLHSSLVKSREVDRSRRADIREANMYFLIEATIALSVSFLINLFVMAVFGQAFY--KQTNQAAFNICADSSLHDYAPIFPRNNLTVAVDIYQGGVILGCLFGPPALYIWAVGLLAAGQSSTMTGTYAGQFVMEGFLKLRWSRFARVLLTRSCAILPTVLLAVFRDLRD--LSGLNDLLNVLQSLLLPFAVLPILTFTSMPALMQEFANGL---VSKVITSSIMVL 472          
BLAST of FC931490 vs. ExPASy Swiss-Prot
Match: NRAM1_BISBI (Natural resistance-associated macrophage protein 1 OS=Bison bison GN=SLC11A1 PE=2 SV=1)

HSP 1 Score: 191.815 bits (486), Expect = 3.179e-48
Identity = 110/240 (45.83%), Postives = 154/240 (64.17%), Query Frame = 3
Query:   72 QAVGVVGCIIMPHNVFLHSALVQSRDIDNSKKGRVQEALRYYSIESTIALVVSFMINLFVTTVFAKGFYGTEQANNIGL-VNAGQYLQEK---------------YGGGLF-------PILYIWGIGLLAAGQSSTITGTYAGQFIMGGFLNLRLKKWMRALITRSCAIVPTIIVALVFDTSEDMLDVLNEWLNVLQSVQIPFALIPLLYLVSQEHIMGTFKLALY*DVSWLVLSGELIM 722
            QAVG++G IIMPHN++LHS+LV+SR++D S++  ++EA  Y+ IE+TIAL VSF+INLFV  VF + FY  +Q N     + A   LQ+                Y GG+          LYIW +GLLAAGQSST+TGTYAGQF+M GFL LR  ++ R L+TRSCAI+PT+++A+  D  +  L  LN+ LNVLQS+ +PFA++P+L   S   +M  F   L   VS ++ S  +++
Sbjct:  240 QAVGIIGAIIMPHNIYLHSSLVKSREVDRSRRADIREANMYFLIEATIALSVSFLINLFVMAVFGQAFY--KQTNQAAFNICANSSLQDYAPIFPRNNLTVAVDIYQGGVILGCLFGPAALYIWAVGLLAAGQSSTMTGTYAGQFVMEGFLKLRWSRFARVLLTRSCAILPTVLLAVFRDLRD--LSGLNDLLNVLQSLLLPFAVLPILTFTSMPALMREFANGL---VSKVITSSIMVL 472          
BLAST of FC931490 vs. ExPASy Swiss-Prot
Match: NRAM1_CEREL (Natural resistance-associated macrophage protein 1 OS=Cervus elaphus GN=SLC11A1 PE=2 SV=1)

HSP 1 Score: 191.43 bits (485), Expect = 4.152e-48
Identity = 111/238 (46.64%), Postives = 153/238 (64.29%), Query Frame = 3
Query:   72 QAVGVVGCIIMPHNVFLHSALVQSRDIDNSKKGRVQEALRYYSIESTIALVVSFMINLFVTTVFAKGFY-GTEQANNIGLVNAGQY-------------LQEKYGGGLF-------PILYIWGIGLLAAGQSSTITGTYAGQFIMGGFLNLRLKKWMRALITRSCAIVPTIIVALVFDTSEDMLDVLNEWLNVLQSVQIPFALIPLLYLVSQEHIMGTFKLALY*DVSWLVLSGELIM 722
            QAVG+VG IIMPHN++LHS+LV+SR++D S++  ++EA  Y+ IE+TIAL VSF+INLFV  VF + FY  T QA      N+  +               + Y GG+          LYIW +GLLAAGQSST+TGTYAGQF+M GFL LR  ++ R L+TRSCAI+PT++VA+  D  +  L  LN+ LNVLQS+ +PFA++P+L   S   +M  F   L   VS ++ S  +++
Sbjct:  240 QAVGIVGAIIMPHNIYLHSSLVKSREVDRSRRADIREANMYFLIEATIALSVSFLINLFVMAVFGQAFYKQTNQAAFNICANSSLHDYATIFPRNNLTVAVDIYQGGVILGCLFGPAALYIWAVGLLAAGQSSTMTGTYAGQFVMEGFLKLRWSRFARVLLTRSCAILPTVLVAVFRDLRD--LSGLNDLLNVLQSLLLPFAVLPILTFTSMPAVMQEFANGL---VSKVISSSIMVL 472          
BLAST of FC931490 vs. ExPASy Swiss-Prot
Match: NRAM1_PIG (Natural resistance-associated macrophage protein 1 OS=Sus scrofa GN=SLC11A1 PE=2 SV=1)

HSP 1 Score: 189.504 bits (480), Expect = 1.578e-47
Identity = 110/219 (50.23%), Postives = 143/219 (65.30%), Query Frame = 3
Query:   72 QAVGVVGCIIMPHNVFLHSALVQSRDIDNSKKGRVQEALRYYSIESTIALVVSFMINLFVTTVFAKGFY-GTEQANNIGLVNAGQYLQEK-------------YGGGLF-------PILYIWGIGLLAAGQSSTITGTYAGQFIMGGFLNLRLKKWMRALITRSCAIVPTIIVALVFDTSEDMLDVLNEWLNVLQSVQIPFALIPLLYLVSQEHIMGTF 665
            QAVG+VG IIMPHN++LHSALV+SR++D +++  ++EA  Y+ IESTIAL VSF INLFV  VF + FY  T QA      N+  +   K             Y GG+          LYIW +GLLAAGQSST+TGTYAGQF+M GFL LR  ++ R L+TRSCAI+P ++VA VF   +D L  LN+ LNVLQS+ +PFA++P+L   S   +M  F
Sbjct:  240 QAVGIVGAIIMPHNIYLHSALVKSREVDRTRREDIREANMYFLIESTIALFVSFFINLFVMAVFGQAFYQQTNQAAFNICANSSLHDYAKIFPRNNLTVAVDFYQGGVILGCLFGPAALYIWAVGLLAAGQSSTMTGTYAGQFVMEGFLKLRWSRFARLLLTRSCAILPALLVA-VFKELQD-LSSLNDLLNVLQSLLLPFAVLPILTFTSMPALMQEF 456          
BLAST of FC931490 vs. ExPASy Swiss-Prot
Match: NRAM1_BUBBU (Natural resistance-associated macrophage protein 1 OS=Bubalus bubalis GN=SLC11A1 PE=2 SV=1)

HSP 1 Score: 189.504 bits (480), Expect = 1.578e-47
Identity = 110/238 (46.22%), Postives = 153/238 (64.29%), Query Frame = 3
Query:   72 QAVGVVGCIIMPHNVFLHSALVQSRDIDNSKKGRVQEALRYYSIESTIALVVSFMINLFVTTVFAKGFY-GTEQA--NNIGLVNAGQYLQ-----------EKYGGGLF-------PILYIWGIGLLAAGQSSTITGTYAGQFIMGGFLNLRLKKWMRALITRSCAIVPTIIVALVFDTSEDMLDVLNEWLNVLQSVQIPFALIPLLYLVSQEHIMGTFKLALY*DVSWLVLSGELIM 722
            QAVG++G IIMPHN++LHS+LV+SR++D S++  ++EA  Y+ IE+TIAL VSF+INLFV  VF + FY  T QA  N     +   Y             + Y GG+          LYIW +GLLAAGQSST+TGTYAGQF+M GFL LR  ++ R L+TRSCAI+PT+++A+  D  +  L  LN+ LNVLQS+ +PFA++P+L   S   +M  F   L   VS ++ S  +++
Sbjct:  240 QAVGIIGAIIMPHNIYLHSSLVKSREVDRSRRADIREANMYFLIEATIALSVSFLINLFVMAVFGQAFYKQTNQAAFNICAKSSLHDYAPIFPRNNLTVAVDIYQGGVILGCLFGPAALYIWAVGLLAAGQSSTMTGTYAGQFVMEGFLKLRWSRFARVLLTRSCAILPTVLLAVFRDLRD--LSGLNDLLNVLQSLLLPFAVLPILTFTSMPALMQEFANGL---VSKVITSSIMVL 472          
BLAST of FC931490 vs. ExPASy Swiss-Prot
Match: NRAM1_SHEEP (Natural resistance-associated macrophage protein 1 OS=Ovis aries GN=SLC11A1 PE=2 SV=2)

HSP 1 Score: 189.119 bits (479), Expect = 2.060e-47
Identity = 110/238 (46.22%), Postives = 151/238 (63.45%), Query Frame = 3
Query:   72 QAVGVVGCIIMPHNVFLHSALVQSRDIDNSKKGRVQEALRYYSIESTIALVVSFMINLFVTTVFAKGFY-GTEQANNIGLVNAGQY-------------LQEKYGGGLF-------PILYIWGIGLLAAGQSSTITGTYAGQFIMGGFLNLRLKKWMRALITRSCAIVPTIIVALVFDTSEDMLDVLNEWLNVLQSVQIPFALIPLLYLVSQEHIMGTFKLALY*DVSWLVLSGELIM 722
            QAVG+VG IIMPHN++LHS+LV+SR++D S++  ++EA  Y+ IE+TIAL VSF INLFV  VF + FY  T QA      N+  +               + Y GG+          LYIW +GLLAAGQSST+TGTYAGQF+M GFL LR  ++ R L+TRSCAI PT+++A+  D  +  L  LN+ LNVLQS+ +PFA++P+L   S   +M  F   L   VS ++ S  +++
Sbjct:  240 QAVGIVGAIIMPHNIYLHSSLVKSREVDRSRRADIREANMYFLIEATIALSVSFFINLFVMAVFGQAFYKQTNQAAFNICANSSLHDYATIFPRDNLTVAVDIYQGGVILGCLFGPAALYIWAVGLLAAGQSSTMTGTYAGQFVMEGFLKLRWSRFARVLLTRSCAIPPTVLLAVFRDLQD--LSGLNDLLNVLQSLLLPFAVLPILTFTSMPALMQEFANGL---VSKIITSSIMVL 472          
BLAST of FC931490 vs. ExPASy Swiss-Prot
Match: NRAM1_CANFA (Natural resistance-associated macrophage protein 1 OS=Canis familiaris GN=SLC11A1 PE=2 SV=2)

HSP 1 Score: 189.119 bits (479), Expect = 2.060e-47
Identity = 108/221 (48.87%), Postives = 142/221 (64.25%), Query Frame = 3
Query:   72 QAVGVVGCIIMPHNVFLHSALVQSRDIDNSKKGRVQEALRYYSIESTIALVVSFMINLFVTTVFAKGFYGTEQANNIGL-VNAGQYLQEK---------------YGGGLF-------PILYIWGIGLLAAGQSSTITGTYAGQFIMGGFLNLRLKKWMRALITRSCAIVPTIIVALVFDTSEDMLDVLNEWLNVLQSVQIPFALIPLLYLVSQEHIMGTF 665
            QAVG+VG IIMPHN++LHSALV+SR+ID S++  ++EA  Y+ IE++IAL VSF INLFV  VF + FY  +Q N     V A   L +                Y GG+          LYIW +GLLAAGQSST+TGTYAGQF+M GFL LR  ++ R L+TRSCAI+PT++V +  D  +  L  LN+ LNVLQS+ +PFA++P+L   S   +M  F
Sbjct:  240 QAVGIVGAIIMPHNIYLHSALVKSREIDRSRRPDIREANMYFLIEASIALSVSFFINLFVVAVFGQAFY--QQTNEAAFNVCANSSLHDYAKIFPRNNLTVEVDIYQGGVMLGCVFGPAALYIWAVGLLAAGQSSTMTGTYAGQFVMEGFLRLRWSRFARVLLTRSCAILPTVLVVVFRDLKD--LSGLNDLLNVLQSLLLPFAVLPILTFTSMPALMQEF 456          
BLAST of FC931490 vs. ExPASy Swiss-Prot
Match: MVL_DROME (Protein Malvolio OS=Drosophila melanogaster GN=Mvl PE=2 SV=2)

HSP 1 Score: 188.734 bits (478), Expect = 2.691e-47
Identity = 109/237 (45.99%), Postives = 142/237 (59.92%), Query Frame = 3
Query:   45 SKTQFQTIQQAVGVVGCIIMPHNVFLHSALVQSRDIDNSKKGRVQEALRYYSIESTIALVVSFMINLFVTTVFAKGFYG-----------------------TEQANNIGLVNAGQYLQEKYGGGLF-------PILYIWGIGLLAAGQSSTITGTYAGQFIMGGFLNLRLKKWMRALITRSCAIVPTIIVALVFDTSEDMLDVLNEWLNVLQSVQIPFALIPLLYLVSQEHIMGTF 665
            S      + QAVGVVG +IMPHN++LHSALV+SRDID  +  +V EA  Y+ IE+++AL VSF+INLFV  VFA G YG                        +  N   +++A     + Y GGLF         +YIWG+G+LAAGQSST+TGTYAGQF M GFLNL+  +W R L+TR  AI+PT  +A+ F   ED L  +N+ LN + S+Q+PFA IP +   S   IMG F
Sbjct:  253 SNCNSNVLLQAVGVVGAVIMPHNLYLHSALVKSRDIDRRQTKKVSEANFYFFIEASVALFVSFIINLFVVAVFAHGMYGKTNNDVVEVCKDKSMYEDAKMSFVDNVNGTAIIDA-----DLYKGGLFLGCTFGAVAMYIWGVGILAAGQSSTMTGTYAGQFSMEGFLNLQWPRWCRVLVTRCIAIIPTFCLAM-FSKMED-LTSMNDILNAVMSLQLPFAAIPTIAFTSCAAIMGEF 482          
BLAST of FC931490 vs. ExPASy Swiss-Prot
Match: NRAM1_CHICK (Natural resistance-associated macrophage protein 1 OS=Gallus gallus GN=SLC11A1 PE=2 SV=1)

HSP 1 Score: 186.037 bits (471), Expect = 1.744e-46
Identity = 110/238 (46.22%), Postives = 146/238 (61.34%), Query Frame = 3
Query:   60 QTIQQAVGVVGCIIMPHNVFLHSALVQSRDIDNSKKGRVQEALRYYSIESTIALVVSFMINLFVTTVFAKGFY--GTEQANN------------IGLVNAGQYLQEKYGGGLF-------PILYIWGIGLLAAGQSSTITGTYAGQFIMGGFLNLRLKKWMRALITRSCAIVPTIIVALVFDTSEDMLDVLNEWLNVLQSVQIPFALIPLLYLVSQEHIMGTFKLALY*DVSWLVLSG 710
            + + QAVG+VG IIMPHN+FLHS+LV++R ID SKK  V+EA  Y+  ES +AL VSF+INLFV  VF + FY    E  +N            I  +N      + Y GG+          LYIW +G+LAAGQSST+TGTYAGQF+M GFL LR  ++ R L TRS AI+PT+ VA   D S+  L  +N+ LNVLQS+ +PFA++P+L   S   +M  F   L   V   +++G
Sbjct:  244 EELLQAVGIVGAIIMPHNIFLHSSLVKTRAIDRSKKEEVKEANMYFLTESCLALFVSFLINLFVMAVFGEAFYHQRNEDVHNKCVNSSVSRYASIFPINNETVSVDIYQGGVILGCYFGAAALYIWAVGILAAGQSSTMTGTYAGQFVMEGFLQLRWSRFTRVLFTRSLAILPTLFVAAFRDVSQ--LTGMNDLLNVLQSILLPFAVLPVLTFTSLRPLMHDFANGLLGQVLMSLITG 479          
The following BLAST results are available for this feature:
BLAST of FC931490 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 138
Match NameE-valueIdentityDescription
NRAM1_HUMAN1.427e-4850.23Natural resistance-associated macrophage protein 1... [more]
NRAM1_BOVIN1.864e-4845.83Natural resistance-associated macrophage protein 1... [more]
NRAM1_BISBI3.179e-4845.83Natural resistance-associated macrophage protein 1... [more]
NRAM1_CEREL4.152e-4846.64Natural resistance-associated macrophage protein 1... [more]
NRAM1_PIG1.578e-4750.23Natural resistance-associated macrophage protein 1... [more]
NRAM1_BUBBU1.578e-4746.22Natural resistance-associated macrophage protein 1... [more]
NRAM1_SHEEP2.060e-4746.22Natural resistance-associated macrophage protein 1... [more]
NRAM1_CANFA2.060e-4748.87Natural resistance-associated macrophage protein 1... [more]
MVL_DROME2.691e-4745.99Protein Malvolio OS=Drosophila melanogaster GN=Mvl... [more]
NRAM1_CHICK1.744e-4646.22Natural resistance-associated macrophage protein 1... [more]

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Properties
Property NameValue
Genbank descriptionC34105F09EF PostHarvP1 Citrus clementina cDNA clone C34105F09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931490 ID=FC931490; Name=FC931490; organism=Citrus clementina; type=EST; length=733bp
GAGACCAAGCCAAGTGGCTCTGAGCTTCTTATTGGCATTTTGGTTCCAAA
ACTCAGTTCCAAACAATACAGCAGGCTGTTGGAGTTGTGGGCTGTATTAT
CATGCCTCATAATGTGTTTTTGCACTCCGCTCTTGTGCAATCAAGAGATA
TTGATAACAGTAAGAAAGGCCGTGTCCAAGAAGCTCTCAGATACTATTCC
ATTGAGTCTACTATTGCCCTTGTTGTTTCATTCATGATCAATCTTTTTGT
TACAACTGTTTTTGCAAAGGGGTTTTATGGTACTGAACAGGCCAATAACA
TTGGCCTCGTAAATGCTGGCCAGTACCTTCAAGAGAAGTACGGAGGTGGA
CTTTTCCCAATTTTATATATCTGGGGTATTGGGTTATTAGCAGCTGGACA
GAGTAGCACCATTACCGGCACTTATGCTGGGCAGTTTATCATGGGAGGTT
TCCTAAATTTGAGGTTGAAAAAATGGATGAGGGCACTGATAACACGGAGC
TGTGCCATTGTCCCAACTATTATTGTTGCACTTGTTTTTGATACCTCTGA
AGACATGTTAGATGTTTTAAATGAATGGCTAAATGTGCTACAGTCAGTTC
AGATCCCTTTTGCTCTTATCCCACTTTTATATTTGGTCTCCCAGGAGCAT
ATCATGGGCACTTTCAAATTGGCCCTATATTAAGATGTTTCATGGCTTGT
GCTGTCTGGTGAACTGATCATGGGTATCTTTGC
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