FC931490

Overview
NameFC931490
Unique NameFC931490
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length733
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of FC931490 vs. ExPASy Swiss-Prot
Match: MNTH_ECOSM (Manganese transport protein mntH OS=Escherichia coli (strain SMS-3-5 / SECEC) GN=mntH PE=3 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 2.716e-15
Identity = 61/195 (31.28%), Postives = 95/195 (48.72%), Query Frame = 3 
Query:   75 AVGVVGCIIMPHNVFLHSALVQSRDIDNSKKGRVQEALRYYSIESTIALVVSFMINLFVTTVFAKGFYGTEQANNIGLVNAGQYLQEKYGGGLFPILYIWGIGLLAAGQSSTITGTYAGQFIMGGFLNLRLKKWMRALITRSCAIVPTIIVALVFDTSEDMLDVLNEWLNVLQSVQIPFALIPLLYLVSQEHIMG 659
            A GV+G  IMPH ++LHS+L Q     +   G  Q+       +  IA+ ++  +NL +    A  F+ +       L  A   LQ         +   +G+ L+AAG SST+ GT AGQ +M GF+   +  W+R  +T    ++P+ IV L+       + V+++   VL S  I  AL+PLL   S   +MG
Sbjct:  200 AAGVLGATIMPHVIYLHSSLTQ-----HLHGGSRQQRYSATKWDVAIAMTIAGFVNLAMMATAAAAFHFSGHTGVADLDEAYLTLQPLLSHAAATV---FGLSLVAAGLSSTVVGTLAGQVVMQGFIRFHIPLWVRRTVT----MLPSFIVILM-GLDPTRILVMSQ---VLLSFGIALALVPLLIFTSDSKLMG 378
[Close]
BLAST of FC931490 vs. ExPASy Swiss-Prot
Match: MNTH_ECOSE (Manganese transport protein mntH OS=Escherichia coli (strain SE11) GN=mntH PE=3 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 2.716e-15
Identity = 61/195 (31.28%), Postives = 95/195 (48.72%), Query Frame = 3 
Query:   75 AVGVVGCIIMPHNVFLHSALVQSRDIDNSKKGRVQEALRYYSIESTIALVVSFMINLFVTTVFAKGFYGTEQANNIGLVNAGQYLQEKYGGGLFPILYIWGIGLLAAGQSSTITGTYAGQFIMGGFLNLRLKKWMRALITRSCAIVPTIIVALVFDTSEDMLDVLNEWLNVLQSVQIPFALIPLLYLVSQEHIMG 659
            A GV+G  IMPH ++LHS+L Q     +   G  Q+       +  IA+ ++  +NL +    A  F+ +       L  A   LQ         +   +G+ L+AAG SST+ GT AGQ +M GF+   +  W+R  +T    ++P+ IV L+       + V+++   VL S  I  AL+PLL   S   +MG
Sbjct:  200 AAGVLGATIMPHVIYLHSSLTQ-----HLHGGSRQQRYSATKWDVAIAMTIAGFVNLAMMATAAAAFHFSGHTGVADLDEAYLTLQPLLSHAAATV---FGLSLVAAGLSSTVVGTLAGQVVMQGFIRFHIPLWVRRTVT----MLPSFIVILM-GLDPTRILVMSQ---VLLSFGIALALVPLLIFTSDSKLMG 378
[Close]
BLAST of FC931490 vs. ExPASy Swiss-Prot
Match: MNTH_ECOLU (Manganese transport protein mntH OS=Escherichia coli O17:K52:H18 (strain UMN026 / ExPEC) GN=mntH PE=3 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 2.716e-15
Identity = 61/195 (31.28%), Postives = 95/195 (48.72%), Query Frame = 3 
Query:   75 AVGVVGCIIMPHNVFLHSALVQSRDIDNSKKGRVQEALRYYSIESTIALVVSFMINLFVTTVFAKGFYGTEQANNIGLVNAGQYLQEKYGGGLFPILYIWGIGLLAAGQSSTITGTYAGQFIMGGFLNLRLKKWMRALITRSCAIVPTIIVALVFDTSEDMLDVLNEWLNVLQSVQIPFALIPLLYLVSQEHIMG 659
            A GV+G  IMPH ++LHS+L Q     +   G  Q+       +  IA+ ++  +NL +    A  F+ +       L  A   LQ         +   +G+ L+AAG SST+ GT AGQ +M GF+   +  W+R  +T    ++P+ IV L+       + V+++   VL S  I  AL+PLL   S   +MG
Sbjct:  200 AAGVLGATIMPHVIYLHSSLTQ-----HLHGGSRQQRYSATKWDVAIAMTIAGFVNLAMMATAAAAFHFSGHTGVADLDEAYLTLQPLLSHAAATV---FGLSLVAAGLSSTVVGTLAGQVVMQGFIRFHIPLWVRRTVT----MLPSFIVILM-GLDPTRILVMSQ---VLLSFGIALALVPLLIFTSDSKLMG 378
[Close]
BLAST of FC931490 vs. ExPASy Swiss-Prot
Match: MNTH_ECOLI (Manganese transport protein mntH OS=Escherichia coli (strain K12) GN=mntH PE=1 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 2.716e-15
Identity = 61/195 (31.28%), Postives = 95/195 (48.72%), Query Frame = 3 
Query:   75 AVGVVGCIIMPHNVFLHSALVQSRDIDNSKKGRVQEALRYYSIESTIALVVSFMINLFVTTVFAKGFYGTEQANNIGLVNAGQYLQEKYGGGLFPILYIWGIGLLAAGQSSTITGTYAGQFIMGGFLNLRLKKWMRALITRSCAIVPTIIVALVFDTSEDMLDVLNEWLNVLQSVQIPFALIPLLYLVSQEHIMG 659
            A GV+G  IMPH ++LHS+L Q     +   G  Q+       +  IA+ ++  +NL +    A  F+ +       L  A   LQ         +   +G+ L+AAG SST+ GT AGQ +M GF+   +  W+R  +T    ++P+ IV L+       + V+++   VL S  I  AL+PLL   S   +MG
Sbjct:  200 AAGVLGATIMPHVIYLHSSLTQ-----HLHGGSRQQRYSATKWDVAIAMTIAGFVNLAMMATAAAAFHFSGHTGVADLDEAYLTLQPLLSHAAATV---FGLSLVAAGLSSTVVGTLAGQVVMQGFIRFHIPLWVRRTVT----MLPSFIVILM-GLDPTRILVMSQ---VLLSFGIALALVPLLIFTSDSKLMG 378
[Close]
BLAST of FC931490 vs. ExPASy Swiss-Prot
Match: MNTH_ECOLC (Manganese transport protein mntH OS=Escherichia coli (strain ATCC 8739 / DSM 1576 / Crooks) GN=mntH PE=3 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 2.716e-15
Identity = 61/195 (31.28%), Postives = 95/195 (48.72%), Query Frame = 3 
Query:   75 AVGVVGCIIMPHNVFLHSALVQSRDIDNSKKGRVQEALRYYSIESTIALVVSFMINLFVTTVFAKGFYGTEQANNIGLVNAGQYLQEKYGGGLFPILYIWGIGLLAAGQSSTITGTYAGQFIMGGFLNLRLKKWMRALITRSCAIVPTIIVALVFDTSEDMLDVLNEWLNVLQSVQIPFALIPLLYLVSQEHIMG 659
            A GV+G  IMPH ++LHS+L Q     +   G  Q+       +  IA+ ++  +NL +    A  F+ +       L  A   LQ         +   +G+ L+AAG SST+ GT AGQ +M GF+   +  W+R  +T    ++P+ IV L+       + V+++   VL S  I  AL+PLL   S   +MG
Sbjct:  200 AAGVLGATIMPHVIYLHSSLTQ-----HLHGGSRQQRYSATKWDVAIAMTIAGFVNLAMMATAAAAFHFSGHTGVADLDEAYLTLQPLLSHAAATV---FGLSLVAAGLSSTVVGTLAGQVVMQGFIRFHIPLWVRRTVT----MLPSFIVILM-GLDPTRILVMSQ---VLLSFGIALALVPLLIFTSDSKLMG 378
[Close]
BLAST of FC931490 vs. ExPASy Swiss-Prot
Match: MNTH_ECOL6 (Manganese transport protein mntH OS=Escherichia coli O6 GN=mntH PE=3 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 2.716e-15
Identity = 61/195 (31.28%), Postives = 95/195 (48.72%), Query Frame = 3 
Query:   75 AVGVVGCIIMPHNVFLHSALVQSRDIDNSKKGRVQEALRYYSIESTIALVVSFMINLFVTTVFAKGFYGTEQANNIGLVNAGQYLQEKYGGGLFPILYIWGIGLLAAGQSSTITGTYAGQFIMGGFLNLRLKKWMRALITRSCAIVPTIIVALVFDTSEDMLDVLNEWLNVLQSVQIPFALIPLLYLVSQEHIMG 659
            A GV+G  IMPH ++LHS+L Q     +   G  Q+       +  IA+ ++  +NL +    A  F+ +       L  A   LQ         +   +G+ L+AAG SST+ GT AGQ +M GF+   +  W+R  +T    ++P+ IV L+       + V+++   VL S  I  AL+PLL   S   +MG
Sbjct:  200 AAGVLGATIMPHVIYLHSSLTQ-----HLHGGSRQQRYSATKWDVAIAMTIAGFVNLAMMATAAAAFHFSGHTGVADLDEAYLTLQPLLSHAAATV---FGLSLVAAGLSSTVVGTLAGQVVMQGFIRFHIPLWVRRTVT----MLPSFIVILM-GLDPTRILVMSQ---VLLSFGIALALVPLLIFTSDSKLMG 378
[Close]
BLAST of FC931490 vs. ExPASy Swiss-Prot
Match: MNTH_ECOL5 (Manganese transport protein mntH OS=Escherichia coli O6:K15:H31 (strain 536 / UPEC) GN=mntH PE=3 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 2.716e-15
Identity = 61/195 (31.28%), Postives = 95/195 (48.72%), Query Frame = 3 
Query:   75 AVGVVGCIIMPHNVFLHSALVQSRDIDNSKKGRVQEALRYYSIESTIALVVSFMINLFVTTVFAKGFYGTEQANNIGLVNAGQYLQEKYGGGLFPILYIWGIGLLAAGQSSTITGTYAGQFIMGGFLNLRLKKWMRALITRSCAIVPTIIVALVFDTSEDMLDVLNEWLNVLQSVQIPFALIPLLYLVSQEHIMG 659
            A GV+G  IMPH ++LHS+L Q     +   G  Q+       +  IA+ ++  +NL +    A  F+ +       L  A   LQ         +   +G+ L+AAG SST+ GT AGQ +M GF+   +  W+R  +T    ++P+ IV L+       + V+++   VL S  I  AL+PLL   S   +MG
Sbjct:  200 AAGVLGATIMPHVIYLHSSLTQ-----HLHGGSRQQRYSATKWDVAIAMTIAGFVNLAMMATAAAAFHFSGHTGVADLDEAYLTLQPLLSHAAATV---FGLSLVAAGLSSTVVGTLAGQVVMQGFIRFHIPLWVRRTVT----MLPSFIVILM-GLDPTRILVMSQ---VLLSFGIALALVPLLIFTSDSKLMG 378
[Close]
BLAST of FC931490 vs. ExPASy Swiss-Prot
Match: MNTH_ECOK1 (Manganese transport protein mntH OS=Escherichia coli O1:K1 / APEC GN=mntH PE=3 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 2.716e-15
Identity = 61/195 (31.28%), Postives = 95/195 (48.72%), Query Frame = 3 
Query:   75 AVGVVGCIIMPHNVFLHSALVQSRDIDNSKKGRVQEALRYYSIESTIALVVSFMINLFVTTVFAKGFYGTEQANNIGLVNAGQYLQEKYGGGLFPILYIWGIGLLAAGQSSTITGTYAGQFIMGGFLNLRLKKWMRALITRSCAIVPTIIVALVFDTSEDMLDVLNEWLNVLQSVQIPFALIPLLYLVSQEHIMG 659
            A GV+G  IMPH ++LHS+L Q     +   G  Q+       +  IA+ ++  +NL +    A  F+ +       L  A   LQ         +   +G+ L+AAG SST+ GT AGQ +M GF+   +  W+R  +T    ++P+ IV L+       + V+++   VL S  I  AL+PLL   S   +MG
Sbjct:  200 AAGVLGATIMPHVIYLHSSLTQ-----HLHGGSRQQRYSATKWDVAIAMTIAGFVNLAMMATAAAAFHFSGHTGVADLDEAYLTLQPLLSHAAATV---FGLSLVAAGLSSTVVGTLAGQVVMQGFIRFHIPLWVRRTVT----MLPSFIVILM-GLDPTRILVMSQ---VLLSFGIALALVPLLIFTSDSKLMG 378
[Close]
BLAST of FC931490 vs. ExPASy Swiss-Prot
Match: MNTH_ECOHS (Manganese transport protein mntH OS=Escherichia coli O9:H4 (strain HS) GN=mntH PE=3 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 2.716e-15
Identity = 61/195 (31.28%), Postives = 95/195 (48.72%), Query Frame = 3 
Query:   75 AVGVVGCIIMPHNVFLHSALVQSRDIDNSKKGRVQEALRYYSIESTIALVVSFMINLFVTTVFAKGFYGTEQANNIGLVNAGQYLQEKYGGGLFPILYIWGIGLLAAGQSSTITGTYAGQFIMGGFLNLRLKKWMRALITRSCAIVPTIIVALVFDTSEDMLDVLNEWLNVLQSVQIPFALIPLLYLVSQEHIMG 659
            A GV+G  IMPH ++LHS+L Q     +   G  Q+       +  IA+ ++  +NL +    A  F+ +       L  A   LQ         +   +G+ L+AAG SST+ GT AGQ +M GF+   +  W+R  +T    ++P+ IV L+       + V+++   VL S  I  AL+PLL   S   +MG
Sbjct:  200 AAGVLGATIMPHVIYLHSSLTQ-----HLHGGSRQQRYSATKWDVAIAMTIAGFVNLAMMATAAAAFHFSGHTGVADLDEAYLTLQPLLSHAAATV---FGLSLVAAGLSSTVVGTLAGQVVMQGFIRFHIPLWVRRTVT----MLPSFIVILM-GLDPTRILVMSQ---VLLSFGIALALVPLLIFTSDSKLMG 378
[Close]
BLAST of FC931490 vs. ExPASy Swiss-Prot
Match: MNTH_ECODH (Manganese transport protein mntH OS=Escherichia coli (strain K12 / DH10B) GN=mntH PE=3 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 2.716e-15
Identity = 61/195 (31.28%), Postives = 95/195 (48.72%), Query Frame = 3 
Query:   75 AVGVVGCIIMPHNVFLHSALVQSRDIDNSKKGRVQEALRYYSIESTIALVVSFMINLFVTTVFAKGFYGTEQANNIGLVNAGQYLQEKYGGGLFPILYIWGIGLLAAGQSSTITGTYAGQFIMGGFLNLRLKKWMRALITRSCAIVPTIIVALVFDTSEDMLDVLNEWLNVLQSVQIPFALIPLLYLVSQEHIMG 659
            A GV+G  IMPH ++LHS+L Q     +   G  Q+       +  IA+ ++  +NL +    A  F+ +       L  A   LQ         +   +G+ L+AAG SST+ GT AGQ +M GF+   +  W+R  +T    ++P+ IV L+       + V+++   VL S  I  AL+PLL   S   +MG
Sbjct:  200 AAGVLGATIMPHVIYLHSSLTQ-----HLHGGSRQQRYSATKWDVAIAMTIAGFVNLAMMATAAAAFHFSGHTGVADLDEAYLTLQPLLSHAAATV---FGLSLVAAGLSSTVVGTLAGQVVMQGFIRFHIPLWVRRTVT----MLPSFIVILM-GLDPTRILVMSQ---VLLSFGIALALVPLLIFTSDSKLMG 378
The following BLAST results are available for this feature:
BLAST of FC931490 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 138
Match NameE-valueIdentityDescription
MNTH_ECOSM2.716e-1531.28Manganese transport protein mntH OS=Escherichia co... [more]
MNTH_ECOSE2.716e-1531.28Manganese transport protein mntH OS=Escherichia co... [more]
MNTH_ECOLU2.716e-1531.28Manganese transport protein mntH OS=Escherichia co... [more]
MNTH_ECOLI2.716e-1531.28Manganese transport protein mntH OS=Escherichia co... [more]
MNTH_ECOLC2.716e-1531.28Manganese transport protein mntH OS=Escherichia co... [more]
MNTH_ECOL62.716e-1531.28Manganese transport protein mntH OS=Escherichia co... [more]
MNTH_ECOL52.716e-1531.28Manganese transport protein mntH OS=Escherichia co... [more]
MNTH_ECOK12.716e-1531.28Manganese transport protein mntH OS=Escherichia co... [more]
MNTH_ECOHS2.716e-1531.28Manganese transport protein mntH OS=Escherichia co... [more]
MNTH_ECODH2.716e-1531.28Manganese transport protein mntH OS=Escherichia co... [more]

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Properties
Property NameValue
Genbank descriptionC34105F09EF PostHarvP1 Citrus clementina cDNA clone C34105F09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931490 ID=FC931490; Name=FC931490; organism=Citrus clementina; type=EST; length=733bp
GAGACCAAGCCAAGTGGCTCTGAGCTTCTTATTGGCATTTTGGTTCCAAA
ACTCAGTTCCAAACAATACAGCAGGCTGTTGGAGTTGTGGGCTGTATTAT
CATGCCTCATAATGTGTTTTTGCACTCCGCTCTTGTGCAATCAAGAGATA
TTGATAACAGTAAGAAAGGCCGTGTCCAAGAAGCTCTCAGATACTATTCC
ATTGAGTCTACTATTGCCCTTGTTGTTTCATTCATGATCAATCTTTTTGT
TACAACTGTTTTTGCAAAGGGGTTTTATGGTACTGAACAGGCCAATAACA
TTGGCCTCGTAAATGCTGGCCAGTACCTTCAAGAGAAGTACGGAGGTGGA
CTTTTCCCAATTTTATATATCTGGGGTATTGGGTTATTAGCAGCTGGACA
GAGTAGCACCATTACCGGCACTTATGCTGGGCAGTTTATCATGGGAGGTT
TCCTAAATTTGAGGTTGAAAAAATGGATGAGGGCACTGATAACACGGAGC
TGTGCCATTGTCCCAACTATTATTGTTGCACTTGTTTTTGATACCTCTGA
AGACATGTTAGATGTTTTAAATGAATGGCTAAATGTGCTACAGTCAGTTC
AGATCCCTTTTGCTCTTATCCCACTTTTATATTTGGTCTCCCAGGAGCAT
ATCATGGGCACTTTCAAATTGGCCCTATATTAAGATGTTTCATGGCTTGT
GCTGTCTGGTGAACTGATCATGGGTATCTTTGC
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