FC931490

Overview
NameFC931490
Unique NameFC931490
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length733
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC931490 vs. ExPASy Swiss-Prot
Match: MNTH_SALCH (Manganese transport protein mntH OS=Salmonella choleraesuis GN=mntH PE=3 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 6.051e-15
Identity = 65/201 (32.34%), Postives = 102/201 (50.75%), Query Frame = 3
Query:   75 AVGVVGCIIMPHNVFLHSALVQSRDIDNSKKGRVQEALRYYSIESTIALVVSFMINLFVTTVFAKGFYGTEQANNIGLVNAGQ-YLQEKYGGGLFPILY-----IWGIGLLAAGQSSTITGTYAGQFIMGGFLNLRLKKWMRALITRSCAIVPTIIVALVFDTSEDMLDVLNEWLNVLQSVQIPFALIPLLYLVSQEHIMG 659
            A GV+G  IMPH ++LHS+L Q     +   G  Q+       +  IA+ ++  +NL +    A  F+ +    + G+ +  Q YL       L P+L      ++G+ L+AAG SST+ GT AGQ +M GF+   +  W+R  IT    ++P+ IV L+       + V+++   VL S  I  AL+PLL   S   +MG
Sbjct:  200 AAGVLGATIMPHVIYLHSSLTQ-----HLHGGTRQQRYSATKWDVAIAMTIAGFVNLAMMATAAAAFHFS---GHTGIADLDQAYLT------LEPLLSHAAATVFGLSLVAAGLSSTVVGTLAGQVVMQGFVRFHIPLWVRRTIT----MLPSFIVILM-GLDPTRILVMSQ---VLLSFGIALALVPLLIFTSNATLMG 378          
BLAST of FC931490 vs. ExPASy Swiss-Prot
Match: MNTH_KLEP7 (Probable manganese transport protein mntH OS=Klebsiella pneumoniae subsp. pneumoniae (strain ATCC 700721 / MGH 78578) GN=mntH PE=3 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 6.051e-15
Identity = 61/195 (31.28%), Postives = 94/195 (48.21%), Query Frame = 3
Query:   75 AVGVVGCIIMPHNVFLHSALVQSRDIDNSKKGRVQEALRYYSIESTIALVVSFMINLFVTTVFAKGFYGTEQANNIGLVNAGQYLQEKYGGGLFPILYIWGIGLLAAGQSSTITGTYAGQFIMGGFLNLRLKKWMRALITRSCAIVPTIIVALVFDTSEDMLDVLNEWLNVLQSVQIPFALIPLLYLVSQEHIMG 659
            A GV+G  IMPH ++LHS+L Q   +    +     A R+   +  IA+ ++  +NL +    A  F+         L  A   L+         I   +G+ L+AAG SST+ GT AGQ +M GF+   +  W R  IT    ++P+ +V L+       + V+++   VL S  I  AL+PLL   S   +MG
Sbjct:  200 AAGVLGATIMPHVIYLHSSLTQH--LHGGTRKERYNATRW---DVAIAMTIAGFVNLAMMATAAAAFHFNGHTGVADLDQAYMTLEPLLSHAAATI---FGLSLIAAGLSSTVVGTLAGQVVMQGFIRFHIPLWFRRAIT----MLPSFVVILL-GLDPTRILVMSQ---VLLSFGIALALVPLLIFTSNAKLMG 378          
BLAST of FC931490 vs. ExPASy Swiss-Prot
Match: SMF3_YEAST (Iron transporter SMF3 OS=Saccharomyces cerevisiae GN=SMF3 PE=1 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 1.348e-14
Identity = 64/213 (30.05%), Postives = 106/213 (49.77%), Query Frame = 3
Query:   60 QTIQQAVGVVGCIIMPHNVFLHSALVQSR--DIDNSKKGRVQ-----EALRYYSIESTIALVVS-FMINLFVTT----VFAKGFYGTEQANNIGLVNAGQYLQEKYG--GGLFPILYIWGIGLLAAGQSSTITGTYAGQFIMGGFLNLRLKKWMRALITRSCAIVPTIIVALVFDTSEDMLDVLNEWLNVLQSVQIPFALIPLLYLVSQEHIM 656
            Q +  ++G++G  +MPH+++L S++V+ R  D D  K G+V       A++Y    +   L++S F+I  FV +    V      G  +A +  L++  + L        GL     I+ + +L +GQS+ I  T AGQ +  GFL   L  W   L TR  AIVP + V L     + + D+LN +  V+ S+ +P    PL+Y  +   +M
Sbjct:  197 QALYISLGILGATVMPHSLYLGSSIVKPRLHDYDLKKYGKVNARPSLSAIKYTLNYAYAELIISLFLIATFVNSAILIVAGATLSGQPEAEDADLLSIYKLLVHYISPAAGL-----IFALAMLCSGQSAGIICTLAGQIVSEGFLQWSLPPWATRLCTRLIAIVPCLFVTLTMG-EKGISDILN-FSQVVLSLILPIVSAPLIYFTANRKLM 402          
BLAST of FC931490 vs. ExPASy Swiss-Prot
Match: SMF1_YEAST (Manganese transporter SMF1 OS=Saccharomyces cerevisiae GN=SMF1 PE=1 SV=2)

HSP 1 Score: 80.1073 bits (196), Expect = 1.348e-14
Identity = 57/234 (24.36%), Postives = 103/234 (44.02%), Query Frame = 3
Query:   66 IQQAVGVVGCIIMPHNVFLHSALVQSRDIDNSKK----------------------------------GRVQEALRYYSIESTIAL-VVSFMINLFVTTVFAKGFYGTEQANNIGLVNAGQYLQEKYGGGLFPILYIWGIGLLAAGQSSTITGTYAGQFIMGGFLNLRLKKWMRALITRSCAIVPTIIVALVFDTSEDMLDVLNEWLNVLQSVQIPFALIPLLYLVSQEHIMGT 662
            I  A+ ++G  +MPH++FL SALVQ R +D   K                                    ++  ++Y  +E +I L  ++  +N  +  V     Y + +A+   L    + L          I  +    LL +GQS+ +  T +GQ +  G +N +L+ W R L TR  +I+P +++++     E +   LN    V+ S+ +PF + PL++   ++ IM T
Sbjct:  264 IYTAISILGATVMPHSLFLGSALVQPRLLDYDVKHGNYTVSEEQDKVKKSKSTEEIMEEKYFNYRPTNAAIKYCMKYSMVELSITLFTLALFVNCAILVVAGSTLYNSPEADGADLFTIHELLSRNLAPAAGTIFML---ALLLSGQSAGVVCTMSGQIVSEGHINWKLQPWQRRLATRCISIIPCLVISICIG-REALSKALNA-SQVVLSIVLPFLVAPLIFFTCKKSIMKT 492          
BLAST of FC931490 vs. ExPASy Swiss-Prot
Match: MNTH_MYCTU (Probable manganese transport protein mntH OS=Mycobacterium tuberculosis GN=mntH PE=3 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 4.336e-13
Identity = 57/200 (28.50%), Postives = 100/200 (50.00%), Query Frame = 3
Query:   60 QTIQQAVGVVGCIIMPHNVFLHSALVQSRDIDNSKKGRVQEALRYYSIESTIALVVSFMINLFVTTVFAKGFYGTEQANNIGLVNAGQYLQEKYGGGLFPILYIWGIGLLAAGQSSTITGTYAGQFIMGGFLNLRLKKWMRALITRSCAIVPTIIVALVFDTSEDMLDVLNEWLNVLQSVQIPFALIPLLYLVSQEHIMG 659
            +++  A  ++G  +MPH V+LHS L + R        + +  LR    +  +A++++  +N  +  V A    G  + +   +  A   + +  G     I  ++ +GLLA+G +S+  G YAG  IM G L+  +   +R LIT   A+    I+ L FD +  +  VL++   V+ S  IPFA++PL+ L     +MG
Sbjct:  209 ESVLLAAAIMGATVMPHAVYLHSGLARDRHGHPDPGPQRRRLLRVTRWDVGLAMLIAGGVNAAMLLVAALNMRG--RGDTASIEGAYHAVHDTLGA---TIAVLFAVGLLASGLASSSVGAYAGAMIMQGLLHWSVPMLVRRLITLGPALA---ILTLGFDPTRTL--VLSQ---VVLSFGIPFAVLPLVKLTGSPAVMG 395          
BLAST of FC931490 vs. ExPASy Swiss-Prot
Match: MNTH_MYCLE (Probable manganese transport protein mntH OS=Mycobacterium leprae GN=mntH PE=3 SV=2)

HSP 1 Score: 75.0998 bits (183), Expect = 4.336e-13
Identity = 60/202 (29.70%), Postives = 99/202 (49.01%), Query Frame = 3
Query:   60 QTIQQAVGVVGCIIMPHNVFLHSALVQSRDIDNSKKGRVQEALRYYSIESTIALVVSFMINLFVTTVFAKGFYGTEQANNIGLVNAGQY--LQEKYGGGLFPILYIWGIGLLAAGQSSTITGTYAGQFIMGGFLNLRLKKWMRALITRSCAIVPTIIVALVFDTSEDMLDVLNEWLNVLQSVQIPFALIPLLYLVSQEHIMG 659
            +++  A  ++G  +MPH V+LHS L   R          +  LR   ++  +A+ ++ ++N  +  V A       Q + +     G Y  +Q+  G     I  ++ IGLLA+  +S   G YAG  IM G L   +   +R LIT   AI    I+AL FD +  +  VL++   ++ S  IPFA++PL+ L +   +MG
Sbjct:  207 ESVLLAAAIIGATVMPHAVYLHSGLALDRHGHPHAGRSRRRLLRVTRLDVILAMTIAGIVNTAMLLVAAINL----QHHQVTAYIEGTYTAIQDTLGA---TIAMLFAIGLLASSLASASVGAYAGALIMQGLLQRSIPMLIRRLITLCPAIA---ILALGFDPTRAL--VLSQ---IVLSFGIPFAVLPLVKLTNNRGLMG 393          
BLAST of FC931490 vs. ExPASy Swiss-Prot
Match: MNTH_MYCBO (Probable manganese transport protein mntH OS=Mycobacterium bovis GN=mntH PE=3 SV=2)

HSP 1 Score: 75.0998 bits (183), Expect = 4.336e-13
Identity = 57/200 (28.50%), Postives = 100/200 (50.00%), Query Frame = 3
Query:   60 QTIQQAVGVVGCIIMPHNVFLHSALVQSRDIDNSKKGRVQEALRYYSIESTIALVVSFMINLFVTTVFAKGFYGTEQANNIGLVNAGQYLQEKYGGGLFPILYIWGIGLLAAGQSSTITGTYAGQFIMGGFLNLRLKKWMRALITRSCAIVPTIIVALVFDTSEDMLDVLNEWLNVLQSVQIPFALIPLLYLVSQEHIMG 659
            +++  A  ++G  +MPH V+LHS L + R        + +  LR    +  +A++++  +N  +  V A    G  + +   +  A   + +  G     I  ++ +GLLA+G +S+  G YAG  IM G L+  +   +R LIT   A+    I+ L FD +  +  VL++   V+ S  IPFA++PL+ L     +MG
Sbjct:  465 ESVLLAAAIMGATVMPHAVYLHSGLARDRHGHPDPGPQRRRLLRVTRWDVGLAMLIAGGVNAAMLLVAALNMRG--RGDTASIEGAYHAVHDTLGA---TIAVLFAVGLLASGLASSSVGAYAGAMIMQGLLHWSVPMLVRRLITLGPALA---ILTLGFDPTRTL--VLSQ---VVLSFGIPFAVLPLVKLTGSPAVMG 651          
BLAST of FC931490 vs. ExPASy Swiss-Prot
Match: SMF2_YEAST (Manganese transporter SMF2 OS=Saccharomyces cerevisiae GN=SMF2 PE=2 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 9.660e-13
Identity = 64/221 (28.96%), Postives = 101/221 (45.70%), Query Frame = 3
Query:   75 AVGVVGCIIMPHNVFLHSALVQSR----------------DIDNSKKG------RVQEALRYYSIESTIAL-VVSFMINLFVTTVFAKGFYGT----EQANNIGLVNAGQYLQEKYGGGLFPILYIWGIGLLAAGQSSTITGTYAGQFIMGGFLNLRLKKWMRALITRSCAIVPTIIVALVFDTSEDMLDVLNEWLNVLQSVQIPFALIPLLYLVSQEHIM 656
            ++ ++G  +MPH+++L S +VQ R                D+DN+          + E L +   E  I+L  V+  +N  +  V     YG+    E+A+   + N       K  G +F +       LL +GQS+ I  T +GQ +  GFLN  +   +R   TR+ AI P +I+ LV   S  +   LN    V+ S+ +PF   PLLY  S + IM
Sbjct:  246 SLAILGATVMPHSLYLGSGVVQPRLREYDIKNGHYLPDANDMDNNHDNYRPSYEAISETLHFTITELLISLFTVALFVNCAILIVSGATLYGSTQNAEEADLFSIYNLLCSTLSKGAGTVFVL------ALLFSGQSAGIVCTLSGQMVSEGFLNWTVSPALRRSATRAVAITPCLILVLVAGRS-GLSGALNA-SQVVLSLLLPFVSAPLLYFTSSKKIM 458          
The following BLAST results are available for this feature:
BLAST of FC931490 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 138
Match NameE-valueIdentityDescription
MNTH_SALCH6.051e-1532.34Manganese transport protein mntH OS=Salmonella cho... [more]
MNTH_KLEP76.051e-1531.28Probable manganese transport protein mntH OS=Klebs... [more]
SMF3_YEAST1.348e-1430.05Iron transporter SMF3 OS=Saccharomyces cerevisiae ... [more]
SMF1_YEAST1.348e-1424.36Manganese transporter SMF1 OS=Saccharomyces cerevi... [more]
MNTH_MYCTU4.336e-1328.50Probable manganese transport protein mntH OS=Mycob... [more]
MNTH_MYCLE4.336e-1329.70Probable manganese transport protein mntH OS=Mycob... [more]
MNTH_MYCBO4.336e-1328.50Probable manganese transport protein mntH OS=Mycob... [more]
SMF2_YEAST9.660e-1328.96Manganese transporter SMF2 OS=Saccharomyces cerevi... [more]

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Properties
Property NameValue
Genbank descriptionC34105F09EF PostHarvP1 Citrus clementina cDNA clone C34105F09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931490 ID=FC931490; Name=FC931490; organism=Citrus clementina; type=EST; length=733bp
GAGACCAAGCCAAGTGGCTCTGAGCTTCTTATTGGCATTTTGGTTCCAAA
ACTCAGTTCCAAACAATACAGCAGGCTGTTGGAGTTGTGGGCTGTATTAT
CATGCCTCATAATGTGTTTTTGCACTCCGCTCTTGTGCAATCAAGAGATA
TTGATAACAGTAAGAAAGGCCGTGTCCAAGAAGCTCTCAGATACTATTCC
ATTGAGTCTACTATTGCCCTTGTTGTTTCATTCATGATCAATCTTTTTGT
TACAACTGTTTTTGCAAAGGGGTTTTATGGTACTGAACAGGCCAATAACA
TTGGCCTCGTAAATGCTGGCCAGTACCTTCAAGAGAAGTACGGAGGTGGA
CTTTTCCCAATTTTATATATCTGGGGTATTGGGTTATTAGCAGCTGGACA
GAGTAGCACCATTACCGGCACTTATGCTGGGCAGTTTATCATGGGAGGTT
TCCTAAATTTGAGGTTGAAAAAATGGATGAGGGCACTGATAACACGGAGC
TGTGCCATTGTCCCAACTATTATTGTTGCACTTGTTTTTGATACCTCTGA
AGACATGTTAGATGTTTTAAATGAATGGCTAAATGTGCTACAGTCAGTTC
AGATCCCTTTTGCTCTTATCCCACTTTTATATTTGGTCTCCCAGGAGCAT
ATCATGGGCACTTTCAAATTGGCCCTATATTAAGATGTTTCATGGCTTGT
GCTGTCTGGTGAACTGATCATGGGTATCTTTGC
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