FC931490
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC931490 vs. ExPASy Swiss-Prot
Match: NRAML_CAEEL (NRAMP-like transporter smf-1 OS=Caenorhabditis elegans GN=smf-1 PE=2 SV=2) HSP 1 Score: 179.104 bits (453), Expect = 2.132e-44 Identity = 100/243 (41.15%), Postives = 142/243 (58.44%), Query Frame = 3 Query: 72 QAVGVVGCIIMPHNVFLHSALVQSRDIDNSKKGRVQEALRYYSIESTIALVVSFMINLFVTTVFAKGFYGTEQAN------------------------NIGLVNAGQYLQEKYGGGLFPILYIWGIGLLAAGQSSTITGTYAGQFIMGGFLNLRLKKWMRALITRSCAIVPTIIVALVFDTSEDMLDVLNEWLNVLQSVQIPFALIPLLYLVSQEHIMGTFKLALY*DVSWLVLSGELIMGI 728 QA+ VVG +IMPHN++LHSALV+SR +D + RV EA +Y+++ES IAL +SF INLFV VFA G Y A+ + + G YL ++G ++IWGIG+ AAGQSST+TGTY GQF+M GF+ + KW R LITR+ AI PT+++ + L +N++LN +Q +Q+PFALIP++ S IM F+ + + L+ S LI+ I Sbjct: 241 QAISVVGAVIMPHNLYLHSALVKSRRVDRKDRRRVAEANKYFTLESAIALFLSFFINLFVVAVFAHGLYQKTNADVREMCIARHDIPDADIFPNNTEPVEVDIYKGGIYLGCQFGA---IAMFIWGIGIFAAGQSSTMTGTYTGQFVMEGFVKIEWPKWKRVLITRAIAITPTLVLTF-YSQGVQNLTGMNDFLNCVQMIQLPFALIPIITFTSSRKIMHDFRSSKVFQIFALITSA-LILSI 478
BLAST of FC931490 vs. ExPASy Swiss-Prot
Match: MNTH_STAES (Probable manganese transport protein mntH OS=Staphylococcus epidermidis (strain ATCC 12228) GN=mntH PE=3 SV=1) HSP 1 Score: 154.066 bits (388), Expect = 7.345e-37 Identity = 87/221 (39.37%), Postives = 136/221 (61.54%), Query Frame = 3 Query: 75 AVGVVGCIIMPHNVFLHSALVQSRDIDNSKKGRVQEALRYYSIESTIALVVSFMINLFVTTVFAKGFYGTEQANNIGLVNAGQYLQEKYG-----GGLFPILYIWGIGLLAAGQSSTITGTYAGQFIMGGFLNLRLKKWMRALITRSCAIVPTIIVALVFDTSEDMLDVLNEWLNVLQSVQIPFALIPLLYLVSQEHIMGTFKLALY*D-VSWL---VLSG 710 A+G++G IMPHN++LHS++VQSR D +A++Y +I+S I L ++F++N + T+ A F+GT+ + G + L+ + GG+ L+ + LLA+GQ+STITGT AGQ +M GFL L + W+R LITRS A++P II +VF + + ++ L + V S+ +PF+LIPL S +++MG FK + + +SWL VLSG Sbjct: 222 ALGIIGATIMPHNLYLHSSIVQSRKYDRHSIHEKAQAIKYATIDSNIQLSIAFVVNCLLLTLGAALFFGTKTEDLGGFYDLYLALKTEPALGATLGGIMSTLF--AVALLASGQNSTITGTLAGQIVMEGFLKLSIPNWLRRLITRSLAVIPVIICLIVFKGNTEKIEQLLVFSQVFLSIALPFSLIPLQLATSNQNLMGPFKNKTWINIISWLLIIVLSG 440
BLAST of FC931490 vs. ExPASy Swiss-Prot
Match: MNTH_STAEQ (Probable manganese transport protein mntH OS=Staphylococcus epidermidis (strain ATCC 35984 / RP62A) GN=mntH PE=3 SV=1) HSP 1 Score: 154.066 bits (388), Expect = 7.345e-37 Identity = 87/221 (39.37%), Postives = 136/221 (61.54%), Query Frame = 3 Query: 75 AVGVVGCIIMPHNVFLHSALVQSRDIDNSKKGRVQEALRYYSIESTIALVVSFMINLFVTTVFAKGFYGTEQANNIGLVNAGQYLQEKYG-----GGLFPILYIWGIGLLAAGQSSTITGTYAGQFIMGGFLNLRLKKWMRALITRSCAIVPTIIVALVFDTSEDMLDVLNEWLNVLQSVQIPFALIPLLYLVSQEHIMGTFKLALY*D-VSWL---VLSG 710 A+G++G IMPHN++LHS++VQSR D +A++Y +I+S I L ++F++N + T+ A F+GT+ + G + L+ + GG+ L+ + LLA+GQ+STITGT AGQ +M GFL L + W+R LITRS A++P II +VF + + ++ L + V S+ +PF+LIPL S +++MG FK + + +SWL VLSG Sbjct: 222 ALGIIGATIMPHNLYLHSSIVQSRKYDRHSIHEKAQAIKYATIDSNIQLSIAFVVNCLLLTLGAALFFGTKTEDLGGFYDLYLALKTEPALGATLGGIMSTLF--AVALLASGQNSTITGTLAGQIVMEGFLKLSIPNWLRRLITRSLAVIPVIICLIVFKGNTEKIEQLLVFSQVFLSIALPFSLIPLQLATSNQNLMGPFKNKTWINIISWLLIIVLSG 440
BLAST of FC931490 vs. ExPASy Swiss-Prot
Match: MNTH_STAS1 (Probable manganese transport protein mntH OS=Staphylococcus saprophyticus subsp. saprophyticus (strain ATCC 15305 / DSM 20229) GN=mntH PE=3 SV=1) HSP 1 Score: 150.599 bits (379), Expect = 8.121e-36 Identity = 89/224 (39.73%), Postives = 140/224 (62.50%), Query Frame = 3 Query: 75 AVGVVGCIIMPHNVFLHSALVQSRDIDNSKKGRVQEALRYYSIESTIALVVSFMINLFVTTVFAKGFYG--TEQANNI-GLVNAGQYLQEKYGGGLFPILY-IWGIGLLAAGQSSTITGTYAGQFIMGGFLNLRLKKWMRALITRSCAIVPTIIVALVFDTSEDMLDVLNEWLNVLQSVQIPFALIPLLYLVSQEHIMGTFKLALY*D-VSWLVLSGELIMGIF 731 A+G++G IMPHN++LHS++VQSR D + A++Y +++S I L ++F++N + + A F+G TEQ L NA Q Q G L I+ ++ I LLA+GQ+STITGT AGQ +M GF+NL++ W+R LITR AI+P II +VF+++E ++ L + V S+ +PF+LIPL + + +MG FK L+ + +SW ++ I+ I+ Sbjct: 215 ALGIIGATIMPHNLYLHSSIVQSRMYDRNSIQSKAHAIKYATMDSNIQLSIAFIVNCLLLVLGAALFFGVNTEQLGGFYDLYNALQN-QPLLGASLGAIMSTLFAIALLASGQNSTITGTMAGQIVMEGFINLKIPNWLRRLITRLIAILPIIICLIVFNSNEAKMEQLLVFSQVFLSLALPFSLIPLQLSTNDKRLMGQFKNKLWVNIISWCLIIILSILNIY 437
BLAST of FC931490 vs. ExPASy Swiss-Prot
Match: NRAM6_ARATH (Metal transporter Nramp6 OS=Arabidopsis thaliana GN=NRAMP6 PE=2 SV=2) HSP 1 Score: 148.288 bits (373), Expect = 2.935e-35 Identity = 97/226 (42.92%), Postives = 144/226 (63.72%), Query Frame = 3 Query: 75 AVGVVGCIIMPHNVFLHSALVQSRDIDNSKKGRVQEALRYYSIESTIALVVSFMINLFVTTVF-----AKGFYGTEQANNIGL-VNAGQYLQEKYGGGLFPILYIWGIGLLAAGQSSTITGTYAGQFIMGGFLNLRLKKWMRALITRSCAIVPTIIVALVFDTS-EDMLDVLNEWLNVLQSVQIPFALIPLLYLVSQEHIMGTFKLAL-Y*DVSWLVLSGELIMGI 728 A+ ++G ++MPHN+FLHSALV SR I S G ++EA RYY IES +AL+V+F+IN+ V +V A ++A+ L +N +L G L+ I LLA+GQSSTITGTYAGQ++M GFL+LRL+ W+R +TR AI+P++IVAL+ ++ L ++ +++ S ++PFAL+PLL S + MG+ +L V+W++ G LIMGI Sbjct: 220 AISLLGAMVMPHNLFLHSALVLSRKIPRSVTG-IKEACRYYLIESGLALMVAFLINVSVISVSGAVCNASDLSPEDRASCQDLDLNKASFLLRNVVGKWSSKLF--AIALLASGQSSTITGTYAGQYVMQGFLDLRLEPWLRNFLTRCLAIIPSLIVALIGGSAGAGKLIII---ASMILSFELPFALVPLLKFTSSKTKMGSHANSLVISSVTWII--GGLIMGI 437 HSP 2 Score: 21.557 bits (44), Expect = 2.935e-35 Identity = 8/17 (47.06%), Postives = 12/17 (70.59%), Query Frame = 1 Query: 4 TKPSGSELLIGILVPKL 54 +KP E+L G+ VP+L Sbjct: 195 SKPDPKEVLYGLFVPQL 211
BLAST of FC931490 vs. ExPASy Swiss-Prot
Match: MNTH_STAHJ (Probable manganese transport protein mntH OS=Staphylococcus haemolyticus (strain JCSC1435) GN=mntH PE=3 SV=1) HSP 1 Score: 147.132 bits (370), Expect = 8.979e-35 Identity = 77/201 (38.31%), Postives = 123/201 (61.19%), Query Frame = 3 Query: 75 AVGVVGCIIMPHNVFLHSALVQSRDIDNSKKGRVQEALRYYSIESTIALVVSFMINLFVTTVFAKGFYGTEQANNIGLVNAGQYLQEKYGGGLFP---ILYIWGIGLLAAGQSSTITGTYAGQFIMGGFLNLRLKKWMRALITRSCAIVPTIIVALVFDTSEDMLDVLNEWLNVLQSVQIPFALIPLLYLVSQEHIMGTFK 668 A+G++G IMPHN++LHS++VQSR + +A+++ +I+S I L ++F++N + + A FYG N G + Q L+ + G+ + ++ I LLA+GQ+STITGT AGQ +M GFL L + WMR L+TRS A++P ++ ++F +E ++ L + V S+ +PF+LIPL S E +MG FK Sbjct: 215 ALGIIGATIMPHNLYLHSSIVQSRKYNRHSFTEKAQAIKFATIDSNIQLSIAFIVNCLLLVLGAALFYGVNSNNIGGFYDLYQALRTQPVLGVVMGSIMSTLFAIALLASGQNSTITGTLAGQIVMEGFLKLSIPNWMRRLVTRSLAVIPVLLCLVIFRGNESKMEQLLVFSQVFLSIALPFSLIPLQLATSNEKLMGPFK 415
BLAST of FC931490 vs. ExPASy Swiss-Prot
Match: NRAM1_ARATH (Metal transporter Nramp1 OS=Arabidopsis thaliana GN=NRAMP1 PE=2 SV=1) HSP 1 Score: 145.976 bits (367), Expect = 2.000e-34 Identity = 97/227 (42.73%), Postives = 146/227 (64.32%), Query Frame = 3 Query: 75 AVGVVGCIIMPHNVFLHSALVQSRDIDNSKKGRVQEALRYYSIESTIALVVSFMINLFVTTVF-----AKGFYGTEQANNIGL-VNAGQYLQEKYGGGLFPILYIWGIGLLAAGQSSTITGTYAGQFIMGGFLNLRLKKWMRALITRSCAIVPTIIVALVFDTS-EDMLDVLNEWLNVLQSVQIPFALIPLLYLVSQEHIMGTF--KLALY*DVSWLVLSGELIMGI 728 A+ ++G ++MPHN+FLHSALV SR I S G ++EA R+Y IES +AL+V+F+IN+ V +V A ++AN L +N +L G L+ I LLA+GQSSTITGTYAGQ++M GFL+LRL+ W+R L+TR AI+P++IVAL+ ++ L ++ +++ S ++PFAL+PLL S + MG+ +A+ ++W++ G LIMGI Sbjct: 228 AISLLGAMVMPHNLFLHSALVLSRKIPRSASG-IKEACRFYLIESGLALMVAFLINVSVISVSGAVCNAPNLSPEDRANCEDLDLNKASFLLRNVVGKWSSKLF--AIALLASGQSSTITGTYAGQYVMQGFLDLRLEPWLRNLLTRCLAIIPSLIVALIGGSAGAGKLIII---ASMILSFELPFALVPLLKFTSCKTKMGSHVNPMAIT-ALTWVI--GGLIMGI 445
BLAST of FC931490 vs. ExPASy Swiss-Prot
Match: MNTH_LISW6 (Probable manganese transport protein mntH OS=Listeria welshimeri serovar 6b (strain ATCC 35897 / DSM 20650 / SLCC5334) GN=mntH PE=3 SV=1) HSP 1 Score: 144.821 bits (364), Expect = 4.456e-34 Identity = 82/220 (37.27%), Postives = 136/220 (61.82%), Query Frame = 3 Query: 75 AVGVVGCIIMPHNVFLHSALVQSRDIDNSKKGRVQEALRYYSIESTIALVVSFMINLFVTTVFAKGFYGTEQANNIGLVNAGQYLQEKYGGGLFPILYIWGIGLLAAGQSSTITGTYAGQFIMGGFLNLRLKKWMRALITRSCAIVPTIIVALVFDTSEDMLDVLNEWLNVLQSVQIPFALIPLLYLVSQEHIMGTFKLALY*D-VSWLVLSGELIMGIF 731 A+G++G +MPHN++LHS++VQ+R +K+G+ +EA+R+ I+ST +L ++ +IN + + A FY T Q N G+ +A + L G + ++ + LLA+GQ+ST+TGT AGQ +M GFLN+RLK +R L+TR AIVP +I+ ++ + ++ L + V+ S+Q+ FA+IPL+ S + MG F + +SW V I+ I+ Sbjct: 225 ALGILGATVMPHNLYLHSSIVQTRQYARTKEGK-KEAIRFSFIDSTFSLTIALLINASILILAAAAFYTTGQHNVAGIEDAYKLLNPTLGSSIASTVF--AVALLASGQNSTLTGTLAGQIVMEGFLNIRLKPVVRRLLTRVLAIVPAVIITALYGANG--INELLIFSQVILSMQLSFAVIPLVMFTSDKEKMGEFVNPSWLKIISWAVAIFIAILNIY 439
BLAST of FC931490 vs. ExPASy Swiss-Prot
Match: MNTH_LISMO (Probable manganese transport protein mntH OS=Listeria monocytogenes GN=mntH PE=3 SV=1) HSP 1 Score: 144.821 bits (364), Expect = 4.456e-34 Identity = 81/220 (36.82%), Postives = 136/220 (61.82%), Query Frame = 3 Query: 75 AVGVVGCIIMPHNVFLHSALVQSRDIDNSKKGRVQEALRYYSIESTIALVVSFMINLFVTTVFAKGFYGTEQANNIGLVNAGQYLQEKYGGGLFPILYIWGIGLLAAGQSSTITGTYAGQFIMGGFLNLRLKKWMRALITRSCAIVPTIIVALVFDTSEDMLDVLNEWLNVLQSVQIPFALIPLLYLVSQEHIMGTFKLALY*D-VSWLVLSGELIMGIF 731 A+G++G +MPHN++LHS++VQ+R +K+G+ +EA+R+ I+ST +L ++ +IN + + A FY T Q N G+ +A + L G + ++ + LLA+GQ+ST+TGT AGQ +M GFLN+RLK +R L+TR AIVP +I+ ++ + ++ L + V+ S+Q+ FA+IPL+ S + MG F + +SW V ++ I+ Sbjct: 225 ALGILGATVMPHNLYLHSSIVQTRQYARTKEGK-KEAIRFSFIDSTFSLTIALLINASILILAAAAFYTTGQHNVAGIEDAYKLLNPTLGSSIASTVF--AVALLASGQNSTLTGTLAGQIVMEGFLNIRLKPVVRRLLTRVLAIVPAVIITALYGANG--INELLIFSQVILSMQLSFAVIPLVMFTSDKQKMGEFVNPTWLKIISWAVAIFIAVLNIY 439
BLAST of FC931490 vs. ExPASy Swiss-Prot
Match: MNTH_LISMH (Probable manganese transport protein mntH OS=Listeria monocytogenes serotype 4a (strain HCC23) GN=mntH PE=3 SV=1) HSP 1 Score: 144.821 bits (364), Expect = 4.456e-34 Identity = 81/220 (36.82%), Postives = 136/220 (61.82%), Query Frame = 3 Query: 75 AVGVVGCIIMPHNVFLHSALVQSRDIDNSKKGRVQEALRYYSIESTIALVVSFMINLFVTTVFAKGFYGTEQANNIGLVNAGQYLQEKYGGGLFPILYIWGIGLLAAGQSSTITGTYAGQFIMGGFLNLRLKKWMRALITRSCAIVPTIIVALVFDTSEDMLDVLNEWLNVLQSVQIPFALIPLLYLVSQEHIMGTFKLALY*D-VSWLVLSGELIMGIF 731 A+G++G +MPHN++LHS++VQ+R +K+G+ +EA+R+ I+ST +L ++ +IN + + A FY T Q N G+ +A + L G + ++ + LLA+GQ+ST+TGT AGQ +M GFLN+RLK +R L+TR AIVP +I+ ++ + ++ L + V+ S+Q+ FA+IPL+ S + MG F + +SW V ++ I+ Sbjct: 225 ALGILGATVMPHNLYLHSSIVQTRQYARTKEGK-KEAIRFSFIDSTFSLTIALLINASILILAAAAFYTTGQHNVAGIEDAYKLLNPTLGSSIASTVF--AVALLASGQNSTLTGTLAGQIVMEGFLNIRLKPVVRRLLTRVLAIVPAVIITALYGANG--INELLIFSQVILSMQLSFAVIPLVMFTSDKQKMGEFVNPTWLKIISWAVAIFIAVLNIY 439 The following BLAST results are available for this feature:
BLAST of FC931490 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 138
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Sequences
The
following sequences are available for this feature:
EST sequence >FC931490 ID=FC931490; Name=FC931490; organism=Citrus clementina; type=EST; length=733bpback to top |