FC931490

Overview
NameFC931490
Unique NameFC931490
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length733
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC931490 vs. ExPASy Swiss-Prot
Match: MNTH_LISMF (Probable manganese transport protein mntH OS=Listeria monocytogenes serotype 4b (strain F2365) GN=mntH PE=3 SV=1)

HSP 1 Score: 144.821 bits (364), Expect = 4.456e-34
Identity = 81/220 (36.82%), Postives = 136/220 (61.82%), Query Frame = 3
Query:   75 AVGVVGCIIMPHNVFLHSALVQSRDIDNSKKGRVQEALRYYSIESTIALVVSFMINLFVTTVFAKGFYGTEQANNIGLVNAGQYLQEKYGGGLFPILYIWGIGLLAAGQSSTITGTYAGQFIMGGFLNLRLKKWMRALITRSCAIVPTIIVALVFDTSEDMLDVLNEWLNVLQSVQIPFALIPLLYLVSQEHIMGTFKLALY*D-VSWLVLSGELIMGIF 731
            A+G++G  +MPHN++LHS++VQ+R    +K+G+ +EA+R+  I+ST +L ++ +IN  +  + A  FY T Q N  G+ +A + L    G  +   ++   + LLA+GQ+ST+TGT AGQ +M GFLN+RLK  +R L+TR  AIVP +I+  ++  +   ++ L  +  V+ S+Q+ FA+IPL+   S +  MG F    +   +SW V     ++ I+
Sbjct:  225 ALGILGATVMPHNLYLHSSIVQTRQYARTKEGK-KEAIRFSFIDSTFSLTIALLINASILILAAAAFYTTGQHNVAGIEDAYKLLNPTLGSSIASTVF--AVALLASGQNSTLTGTLAGQIVMEGFLNIRLKPVVRRLLTRVLAIVPAVIITALYGANG--INELLIFSQVILSMQLSFAVIPLVMFTSDKQKMGEFVNPTWLKIISWAVAIFIAVLNIY 439          
BLAST of FC931490 vs. ExPASy Swiss-Prot
Match: MNTH_LISMC (Probable manganese transport protein mntH OS=Listeria monocytogenes serotype 4b (strain Clip81459) GN=mntH PE=3 SV=1)

HSP 1 Score: 144.821 bits (364), Expect = 4.456e-34
Identity = 81/220 (36.82%), Postives = 136/220 (61.82%), Query Frame = 3
Query:   75 AVGVVGCIIMPHNVFLHSALVQSRDIDNSKKGRVQEALRYYSIESTIALVVSFMINLFVTTVFAKGFYGTEQANNIGLVNAGQYLQEKYGGGLFPILYIWGIGLLAAGQSSTITGTYAGQFIMGGFLNLRLKKWMRALITRSCAIVPTIIVALVFDTSEDMLDVLNEWLNVLQSVQIPFALIPLLYLVSQEHIMGTFKLALY*D-VSWLVLSGELIMGIF 731
            A+G++G  +MPHN++LHS++VQ+R    +K+G+ +EA+R+  I+ST +L ++ +IN  +  + A  FY T Q N  G+ +A + L    G  +   ++   + LLA+GQ+ST+TGT AGQ +M GFLN+RLK  +R L+TR  AIVP +I+  ++  +   ++ L  +  V+ S+Q+ FA+IPL+   S +  MG F    +   +SW V     ++ I+
Sbjct:  225 ALGILGATVMPHNLYLHSSIVQTRQYARTKEGK-KEAIRFSFIDSTFSLTIALLINASILILAAAAFYTTGQHNVAGIEDAYKLLNPTLGSSIASTVF--AVALLASGQNSTLTGTLAGQIVMEGFLNIRLKPVVRRLLTRVLAIVPAVIITALYGANG--INELLIFSQVILSMQLSFAVIPLVMFTSDKQKMGEFVNPTWLKIISWAVAIFIAVLNIY 439          
BLAST of FC931490 vs. ExPASy Swiss-Prot
Match: MNTH_LISIN (Probable manganese transport protein mntH OS=Listeria innocua GN=mntH PE=3 SV=1)

HSP 1 Score: 144.436 bits (363), Expect = 5.820e-34
Identity = 77/197 (39.09%), Postives = 127/197 (64.47%), Query Frame = 3
Query:   75 AVGVVGCIIMPHNVFLHSALVQSRDIDNSKKGRVQEALRYYSIESTIALVVSFMINLFVTTVFAKGFYGTEQANNIGLVNAGQYLQEKYGGGLFPILYIWGIGLLAAGQSSTITGTYAGQFIMGGFLNLRLKKWMRALITRSCAIVPTIIVALVFDTSEDMLDVLNEWLNVLQSVQIPFALIPLLYLVSQEHIMGTF 665
            A+G++G  +MPHN++LHS++VQ+R    +K+G+ +EA+R+  I+ST +L ++ +IN  +  + A  FY T Q N  G+ +A + L    G  +   ++   + LLA+GQ+ST+TGT AGQ +M GFLN+RLK  +R L+TR  AIVP +I+  ++  +   ++ L  +  V+ S+Q+ FA+IPL+   S +  MG F
Sbjct:  225 ALGILGATVMPHNLYLHSSIVQTRQYARTKEGK-REAIRFSFIDSTFSLTIALLINASILILAAAAFYTTGQHNVAGIEDAYKLLNPTLGSSIASTVF--AVALLASGQNSTLTGTLAGQIVMEGFLNIRLKPVVRRLLTRVLAIVPAVIITALYGANG--INELLIFSQVILSMQLSFAVIPLVMFTSDKQKMGEF 416          
BLAST of FC931490 vs. ExPASy Swiss-Prot
Match: MNTH_BRAJA (Probable manganese transport protein mntH OS=Bradyrhizobium japonicum GN=mntH PE=3 SV=1)

HSP 1 Score: 142.895 bits (359), Expect = 1.693e-33
Identity = 81/219 (36.99%), Postives = 136/219 (62.10%), Query Frame = 3
Query:   75 AVGVVGCIIMPHNVFLHSALVQSRDIDNSKKGRVQEALRYYSIESTIALVVSFMINLFVTTVFAKGFYGTEQANNIGLVNAGQYLQEKYGGGLFPILYIWGIGLLAAGQSSTITGTYAGQFIMGGFLNLRLKKWMRALITRSCAIVPTIIVALVFDTSEDMLDVLNEWLNVLQSVQIPFALIPLLYLVSQEHIMGTFKLALY-*DVSWLVLSGELIMGI 728
            A+G++G  +MPHN++LHS++VQ+R  + ++ GR +EA+++ + +STIAL+++  IN  +  V A  F+ +  ++   +  A + L    G G+   L+   I LLA+G +ST+T T AGQ +M GFL+LRL  W R L+TR  AI+P IIV  ++       D+L  +  V+ S+Q+PFA+IPL+  VS    MG F ++ Y   ++W+V    +++ +
Sbjct:  228 AIGIIGATVMPHNLYLHSSIVQTRAYERNETGR-REAIKWATTDSTIALMLALFINAAILVVAAATFHKSGHSDVAEIGQAFELLSPLLGLGIASTLF--AIALLASGLNSTVTATLAGQIVMEGFLDLRLPSWARRLLTRGIAIIPVIIVTAIYG-ERGTADLL-VFSQVVLSMQLPFAVIPLVRFVSDRRKMGKFAISPYVAAIAWIVAGVIVVLNL 441          
BLAST of FC931490 vs. ExPASy Swiss-Prot
Match: MNTH_ANASP (Probable manganese transport protein mntH OS=Anabaena sp. (strain PCC 7120) GN=mntH PE=3 SV=1)

HSP 1 Score: 141.739 bits (356), Expect = 3.772e-33
Identity = 85/211 (40.28%), Postives = 131/211 (62.09%), Query Frame = 3
Query:   75 AVGVVGCIIMPHNVFLHSALVQSRDIDNSKKGRVQEALRYYSIESTIALVVSFMINLFVTTVFAKGFYGTEQANNIGLVNAGQYLQEKYGGGLFPILYIWGIGLLAAGQSSTITGTYAGQFIMGGFLNLRLKKWMRALITRSCAIVPTIIVALVF-DTSEDMLDVLNEWLNVLQSVQIPFALIPLLYLVSQEHIMGTFKLALY-*DVSWLV 701
            A+G++G  +MPHN++LHS++VQ+RD   + + R  EA+++ +I+ST AL ++  IN  +  V A  F+ +   N   + +A + L    G  +     I+GI LLA+GQSST+T T AGQ +M GFL  RL  W+R LITR  AI+P +I  ++F + S   L VL++   V+ S+Q+PFA+IPL+   S   +MG F   L+   ++WLV
Sbjct:  213 AIGILGATVMPHNLYLHSSIVQTRDWQPTTEKR-WEAIKFGTIDSTFALSLALFINSAILIVSAATFHFSGNQNVAEIQDAYKLLSPLLG--VSAASAIFGIALLASGQSSTLTATLAGQIVMEGFLQFRLPSWLRRLITRLLAIIPALITIILFGENSTSSLIVLSQ---VILSLQLPFAVIPLVMFTSNRRLMGEFVNPLWLKSLAWLV 417          
BLAST of FC931490 vs. ExPASy Swiss-Prot
Match: NRAM2_DICDI (Natural resistance-associated macrophage protein 2 homolog OS=Dictyostelium discoideum GN=nramp2 PE=3 SV=1)

HSP 1 Score: 140.198 bits (352), Expect = 1.098e-32
Identity = 83/212 (39.15%), Postives = 125/212 (58.96%), Query Frame = 3
Query:   39 FGSKTQFQTIQQAVGVVGCIIMPHNVFLHSALVQSRDIDNSK-KGRVQEALRYYSIESTIALVVSFMINLFVTTVFAKGFYGTEQANNIGLVNAGQYLQEKYGGGLFPILYIWGIGLLAAGQSSTITGTYAGQFIMGGFLNLRLKKWMRALITRSCAIVPTIIVALVF-DTSEDMLDVLNEWLNVLQSVQIPFALIPLLYLVSQEHIMGTFK 668
            F  +    ++  A G+VG   MPHN+FLH ++V+SR I N + K  +++A RY  I++ +AL  +F +N+ +  + A  F+ +       L  A + L +   G L  +L+  G+GL  AGQSSTITGT AGQ +M GF+ LR+K W+R  ITR  AI+P  IV +V  D     L ++++   VL S+ +PFA++PL+   S   IMG FK
Sbjct:  318 FVPRLNSDSVMVATGIVGATTMPHNLFLHGSVVKSRKIPNDRRKSVIKQAYRYNVIDTVLALNCAFFVNIAILMLAASVFWKSN-IQVTELSEAYRLLTKLMDGKLAAVLF--GLGLFLAGQSSTITGTMAGQIVMEGFIKLRIKPWLRRFITRLLAIIPAAIVIIVLGDKGTYTLLIISQ---VLLSIGLPFAVVPLIIFTSSYEIMGEFK 523          
BLAST of FC931490 vs. ExPASy Swiss-Prot
Match: MNTH_RHILO (Probable manganese transport protein mntH OS=Rhizobium loti GN=mntH PE=3 SV=1)

HSP 1 Score: 139.428 bits (350), Expect = 1.872e-32
Identity = 74/199 (37.19%), Postives = 124/199 (62.31%), Query Frame = 3
Query:   75 AVGVVGCIIMPHNVFLHSALVQSRDIDNSKKGRVQEALRYYSIESTIALVVSFMINLFVTTVFAKGFYGTEQANNIGLVNAGQYLQEKYGGGLFPILYIWGIGLLAAGQSSTITGTYAGQFIMGGFLNLRLKKWMRALITRSCAIVPTIIVALVFDTSEDMLDVLNEWLNVLQSVQIPFALIPLLYLVSQEHIMGTFKL 671
            A+G++G  +MPHN++LHS++VQ+R  + ++KG+ ++A+++ + +STIAL+++  +N  +  V A  F+ T   +   +  A + L    G G+  IL+   + LLA+G +ST+T T AGQ IM GFL LR+  W R L+TR  AIVP ++V  ++   E     L  +  V+ S+Q+PFA++PL+  VS +  MG   +
Sbjct:  230 AIGIIGATVMPHNLYLHSSIVQTRAYERTEKGK-RDAIKWATTDSTIALMLALFVNAAILIVSAVAFHNTGHQDVAEIDQAFELLSPLLGLGIASILF--AVALLASGLNSTVTATLAGQIIMEGFLRLRIPNWARRLLTRGLAIVPVVVVTALY--GEKGTGQLLVFSQVILSMQLPFAVVPLVQFVSDKKKMGNLAI 423          
BLAST of FC931490 vs. ExPASy Swiss-Prot
Match: MNTH_LACCB (Probable manganese transport protein mntH OS=Lactobacillus casei (strain BL23) GN=mntH PE=3 SV=1)

HSP 1 Score: 137.117 bits (344), Expect = 9.292e-32
Identity = 82/234 (35.04%), Postives = 138/234 (58.97%), Query Frame = 3
Query:   36 HFGSKTQFQTIQQAVGVVGCIIMPHNVFLHSALVQSRDIDNSKKGRVQEALRYYSIESTIALVVSFMINLFVTTVFAKGFYGTEQANN--IGLVNAGQYLQEKYGGGLFPIL-YIWGIGLLAAGQSSTITGTYAGQFIMGGFLNLRLKKWMRALITRSCAIVPTIIVALVFDTSEDMLDVLNEWLNVLQSVQIPFALIPLLYLVSQEHIMGTFKLALY*DVSWLV--LSGELIM 722
            H    T    +  ++G+VG  +MPH++FL S++ Q+R ID +K   V++A+++ +I+S + L ++F++N  +  + A  F+GT  +    + L NA    Q   G    P+L  ++ + LLA+GQSSTITGT AGQ IM GF++L++  W + L+TR  ++ P +I A+ +  +E  ++ L  +  V  S+ +PFA+IPL+   S + IMG F    +  V W    +SG LI+
Sbjct:  214 HADIVTNKSMLYLSLGIVGATVMPHDLFLGSSISQTRKIDRTKHEEVKKAIKFSTIDSNLQLTMAFIVNSLLLILGAALFFGTSSSVGRFVDLFNALSNSQI-VGAIASPMLSMLFAVALLASGQSSTITGTLAGQIIMEGFIHLKMPLWAQRLLTRLMSVTPVLIFAIYYHGNEAKIENLLTFSQVFLSIALPFAVIPLVLYTSDKKIMGEFANRAW--VKWTAWFISGVLII 444          
BLAST of FC931490 vs. ExPASy Swiss-Prot
Match: MNTH_LACC3 (Probable manganese transport protein mntH OS=Lactobacillus casei (strain ATCC 334) GN=mntH PE=3 SV=1)

HSP 1 Score: 137.117 bits (344), Expect = 9.292e-32
Identity = 82/234 (35.04%), Postives = 138/234 (58.97%), Query Frame = 3
Query:   36 HFGSKTQFQTIQQAVGVVGCIIMPHNVFLHSALVQSRDIDNSKKGRVQEALRYYSIESTIALVVSFMINLFVTTVFAKGFYGTEQANN--IGLVNAGQYLQEKYGGGLFPIL-YIWGIGLLAAGQSSTITGTYAGQFIMGGFLNLRLKKWMRALITRSCAIVPTIIVALVFDTSEDMLDVLNEWLNVLQSVQIPFALIPLLYLVSQEHIMGTFKLALY*DVSWLV--LSGELIM 722
            H    T    +  ++G+VG  +MPH++FL S++ Q+R ID +K   V++A+++ +I+S + L ++F++N  +  + A  F+GT  +    + L NA    Q   G    P+L  ++ + LLA+GQSSTITGT AGQ IM GF++L++  W + L+TR  ++ P +I A+ +  +E  ++ L  +  V  S+ +PFA+IPL+   S + IMG F    +  V W    +SG LI+
Sbjct:  214 HADIVTNKSMLYLSLGIVGATVMPHDLFLGSSISQTRKIDRTKHEEVKKAIKFSTIDSNLQLTMAFIVNSLLLILGAALFFGTSSSVGRFVDLFNALSNSQI-VGAIASPMLSMLFAVALLASGQSSTITGTLAGQIIMEGFIHLKMPLWAQRLLTRLMSVTPVLIFAIYYHGNEAKIENLLTFSQVFLSIALPFAVIPLVLYTSDKKIMGEFANRAW--VKWTAWFISGVLII 444          
BLAST of FC931490 vs. ExPASy Swiss-Prot
Match: MNTH_PEDPA (Probable manganese transport protein mntH OS=Pediococcus pentosaceus (strain ATCC 25745 / 183-1w) GN=mntH PE=3 SV=1)

HSP 1 Score: 136.732 bits (343), Expect = 1.214e-31
Identity = 75/219 (34.25%), Postives = 132/219 (60.27%), Query Frame = 3
Query:   75 AVGVVGCIIMPHNVFLHSALVQSRDIDNSKKGRVQEALRYYSIESTIALVVSFMINLFVTTVFAKGFYGTEQANN--IGLVNAGQYLQEKYGGGLFPIL-YIWGIGLLAAGQSSTITGTYAGQFIMGGFLNLRLKKWMRALITRSCAIVPTIIVALVFDTSEDMLDVLNEWLNVLQSVQIPFALIPLLYLVSQEHIMGTFKLALY*DVSWLVLSGELIM 722
            ++G+VG  +MPH+++L S++ Q+R++D   +  V +A+R+ +I+S + L ++F++N  +  + A  FYGT+ +    + L NA    Q   G    P+L  ++ + LLA+GQSSTITGT +GQ IM GF+ LR+  W++ L+TR  ++ P +I A+ +   E  ++ L  +  V  SV +PFA+IPL+   S + +MG F    +  V W   +  +++
Sbjct:  216 SLGIVGATVMPHDLYLGSSISQTREVDRKDRENVAQAIRFSTIDSNMQLFLAFIVNSLLLILGAALFYGTDSSLGRFVDLFNALSNNQI-VGAIASPVLSMLFAVALLASGQSSTITGTLSGQIIMEGFIRLRVPLWVQRLVTRVLSVAPVLIFAIYYHGDEAKIENLLTFSQVFLSVALPFAVIPLVIYTSSKKLMGEFANRAW--VKWCAWTATIVL 431          
The following BLAST results are available for this feature:
BLAST of FC931490 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 138
Match NameE-valueIdentityDescription
MNTH_LISMF4.456e-3436.82Probable manganese transport protein mntH OS=Liste... [more]
MNTH_LISMC4.456e-3436.82Probable manganese transport protein mntH OS=Liste... [more]
MNTH_LISIN5.820e-3439.09Probable manganese transport protein mntH OS=Liste... [more]
MNTH_BRAJA1.693e-3336.99Probable manganese transport protein mntH OS=Brady... [more]
MNTH_ANASP3.772e-3340.28Probable manganese transport protein mntH OS=Anaba... [more]
NRAM2_DICDI1.098e-3239.15Natural resistance-associated macrophage protein 2... [more]
MNTH_RHILO1.872e-3237.19Probable manganese transport protein mntH OS=Rhizo... [more]
MNTH_LACCB9.292e-3235.04Probable manganese transport protein mntH OS=Lacto... [more]
MNTH_LACC39.292e-3235.04Probable manganese transport protein mntH OS=Lacto... [more]
MNTH_PEDPA1.214e-3134.25Probable manganese transport protein mntH OS=Pedio... [more]

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Properties
Property NameValue
Genbank descriptionC34105F09EF PostHarvP1 Citrus clementina cDNA clone C34105F09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931490 ID=FC931490; Name=FC931490; organism=Citrus clementina; type=EST; length=733bp
GAGACCAAGCCAAGTGGCTCTGAGCTTCTTATTGGCATTTTGGTTCCAAA
ACTCAGTTCCAAACAATACAGCAGGCTGTTGGAGTTGTGGGCTGTATTAT
CATGCCTCATAATGTGTTTTTGCACTCCGCTCTTGTGCAATCAAGAGATA
TTGATAACAGTAAGAAAGGCCGTGTCCAAGAAGCTCTCAGATACTATTCC
ATTGAGTCTACTATTGCCCTTGTTGTTTCATTCATGATCAATCTTTTTGT
TACAACTGTTTTTGCAAAGGGGTTTTATGGTACTGAACAGGCCAATAACA
TTGGCCTCGTAAATGCTGGCCAGTACCTTCAAGAGAAGTACGGAGGTGGA
CTTTTCCCAATTTTATATATCTGGGGTATTGGGTTATTAGCAGCTGGACA
GAGTAGCACCATTACCGGCACTTATGCTGGGCAGTTTATCATGGGAGGTT
TCCTAAATTTGAGGTTGAAAAAATGGATGAGGGCACTGATAACACGGAGC
TGTGCCATTGTCCCAACTATTATTGTTGCACTTGTTTTTGATACCTCTGA
AGACATGTTAGATGTTTTAAATGAATGGCTAAATGTGCTACAGTCAGTTC
AGATCCCTTTTGCTCTTATCCCACTTTTATATTTGGTCTCCCAGGAGCAT
ATCATGGGCACTTTCAAATTGGCCCTATATTAAGATGTTTCATGGCTTGT
GCTGTCTGGTGAACTGATCATGGGTATCTTTGC
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