FC931490

Overview
NameFC931490
Unique NameFC931490
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length733
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of FC931490 vs. ExPASy Swiss-Prot
Match: MNTH_BRUSU (Probable manganese transport protein mntH OS=Brucella suis GN=mntH PE=3 SV=1)

HSP 1 Score: 136.732 bits (343), Expect = 1.214e-31
Identity = 78/201 (38.81%), Postives = 122/201 (60.70%), Query Frame = 3 
Query:   75 AVGVVGCIIMPHNVFLHSALVQSRDIDNSKKGRVQEALRYYSIESTIALVVSFMINLFVTTVFAKGFYGTEQANNIGLVNAGQYLQEKYGGGLFPILYIWGIGLLAAGQSSTITGTYAGQFIMGGFLNLRLKKWMRALITRSCAIVPTIIVALVFDT-SEDMLDVLNEWLNVLQSVQIPFALIPLLYLVSQEHIMGTFKLA 674
            A+G++G  +MPHN++LHS +VQ+RD  ++   + +EA+RY +++STIAL  + +IN  +  + A  F+ T       L  A   L    G  + P L+   I LL  G +STIT T AGQ +M GF+++RLK W+R  ITR  AIVP  IV +++ +     L +L++   V+ S+Q+PFA+IPL+   +Q+  MG+   A
Sbjct:  231 ALGIIGATVMPHNLYLHSGIVQTRDYGHTTAEK-REAIRYATLDSTIALTFALVINASILILAAASFHATGHTGVEDLDKAHALLNPLLGSAIAPALF--AIALLCCGLNSTITATMAGQIVMEGFIDIRLKPWIRRAITRFVAIVPAAIVTILYGSQGTTELLILSQ---VVLSLQLPFAVIPLVIFTAQKKKMGSLAAA 425
[Close]
BLAST of FC931490 vs. ExPASy Swiss-Prot
Match: MNTH_BRUME (Probable manganese transport protein mntH OS=Brucella melitensis GN=mntH PE=3 SV=1)

HSP 1 Score: 136.732 bits (343), Expect = 1.214e-31
Identity = 78/201 (38.81%), Postives = 122/201 (60.70%), Query Frame = 3 
Query:   75 AVGVVGCIIMPHNVFLHSALVQSRDIDNSKKGRVQEALRYYSIESTIALVVSFMINLFVTTVFAKGFYGTEQANNIGLVNAGQYLQEKYGGGLFPILYIWGIGLLAAGQSSTITGTYAGQFIMGGFLNLRLKKWMRALITRSCAIVPTIIVALVFDT-SEDMLDVLNEWLNVLQSVQIPFALIPLLYLVSQEHIMGTFKLA 674
            A+G++G  +MPHN++LHS +VQ+RD  ++   + +EA+RY +++STIAL  + +IN  +  + A  F+ T       L  A   L    G  + P L+   I LL  G +STIT T AGQ +M GF+++RLK W+R  ITR  AIVP  IV +++ +     L +L++   V+ S+Q+PFA+IPL+   +Q+  MG+   A
Sbjct:  231 ALGIIGATVMPHNLYLHSGIVQTRDYGHTTAEK-REAIRYATLDSTIALTFALVINASILILAAASFHATGHTGVEDLDKAHALLNPLLGSAIAPALF--AIALLCCGLNSTITATMAGQIVMEGFIDIRLKPWIRRAITRFVAIVPAAIVTILYGSQGTTELLILSQ---VVLSLQLPFAVIPLVIFTAQKKKMGSLAAA 425
[Close]
BLAST of FC931490 vs. ExPASy Swiss-Prot
Match: MNTH_STAAW (Probable manganese transport protein mntH OS=Staphylococcus aureus (strain MW2) GN=mntH PE=3 SV=1)

HSP 1 Score: 136.346 bits (342), Expect = 1.585e-31
Identity = 74/223 (33.18%), Postives = 130/223 (58.30%), Query Frame = 3 
Query:   75 AVGVVGCIIMPHNVFLHSALVQSRDIDNSKKGRVQEALRYYSIESTIALVVSFMINLFVTTVFAKGFYGTEQANNIGLVNAGQYLQEK--YGGGLFPILY-IWGIGLLAAGQSSTITGTYAGQFIMGGFLNLRLKKWMRALITRSCAIVPTIIVALVFDTSEDMLDVLNEWLNVLQSVQIPFALIPLLYLVSQEHIMGTFKLALY*D-VSWLVLSGELIMGIF 731
            A+G++G  IMPHN++LHS++VQSR           +A+++ +I+S I L ++F++N  +  + A  F+ +   +  G  +    L+ +   G  +  I+  ++ + LLA+GQ+STITGT AGQ +M GFL L +  W+R LITRS A++P I+  ++F  +   ++ L  +  V  S+ +PF LIPL    S + +MG F    + + +SW ++    I+ ++
Sbjct:  217 ALGIIGATIMPHNLYLHSSIVQSRTYSRHNNEEKAQAIKFATIDSNIQLSIAFVVNCLLLVLGASLFFNSNADDLGGFYDLYHALKTEPVLGATMGAIMSTLFAVALLASGQNSTITGTLAGQIVMEGFLRLHIPNWLRRLITRSLAVIPVIVCLIIFKGNAAKIEQLLVFSQVFLSIALPFCLIPLQLATSNKDLMGPFYNKTWVNIISWTLIIILSILNVY 439
[Close]
BLAST of FC931490 vs. ExPASy Swiss-Prot
Match: MNTH_STAAS (Probable manganese transport protein mntH OS=Staphylococcus aureus (strain MSSA476) GN=mntH PE=3 SV=1)

HSP 1 Score: 136.346 bits (342), Expect = 1.585e-31
Identity = 74/223 (33.18%), Postives = 130/223 (58.30%), Query Frame = 3 
Query:   75 AVGVVGCIIMPHNVFLHSALVQSRDIDNSKKGRVQEALRYYSIESTIALVVSFMINLFVTTVFAKGFYGTEQANNIGLVNAGQYLQEK--YGGGLFPILY-IWGIGLLAAGQSSTITGTYAGQFIMGGFLNLRLKKWMRALITRSCAIVPTIIVALVFDTSEDMLDVLNEWLNVLQSVQIPFALIPLLYLVSQEHIMGTFKLALY*D-VSWLVLSGELIMGIF 731
            A+G++G  IMPHN++LHS++VQSR           +A+++ +I+S I L ++F++N  +  + A  F+ +   +  G  +    L+ +   G  +  I+  ++ + LLA+GQ+STITGT AGQ +M GFL L +  W+R LITRS A++P I+  ++F  +   ++ L  +  V  S+ +PF LIPL    S + +MG F    + + +SW ++    I+ ++
Sbjct:  217 ALGIIGATIMPHNLYLHSSIVQSRTYSRHNNEEKAQAIKFATIDSNIQLSIAFVVNCLLLVLGASLFFNSNADDLGGFYDLYHALKTEPVLGATMGAIMSTLFAVALLASGQNSTITGTLAGQIVMEGFLRLHIPNWLRRLITRSLAVIPVIVCLIIFKGNAAKIEQLLVFSQVFLSIALPFCLIPLQLATSNKDLMGPFYNKTWVNIISWTLIIILSILNVY 439
[Close]
BLAST of FC931490 vs. ExPASy Swiss-Prot
Match: MNTH_STAAR (Probable manganese transport protein mntH OS=Staphylococcus aureus (strain MRSA252) GN=mntH PE=3 SV=1)

HSP 1 Score: 136.346 bits (342), Expect = 1.585e-31
Identity = 74/223 (33.18%), Postives = 130/223 (58.30%), Query Frame = 3 
Query:   75 AVGVVGCIIMPHNVFLHSALVQSRDIDNSKKGRVQEALRYYSIESTIALVVSFMINLFVTTVFAKGFYGTEQANNIGLVNAGQYLQEK--YGGGLFPILY-IWGIGLLAAGQSSTITGTYAGQFIMGGFLNLRLKKWMRALITRSCAIVPTIIVALVFDTSEDMLDVLNEWLNVLQSVQIPFALIPLLYLVSQEHIMGTFKLALY*D-VSWLVLSGELIMGIF 731
            A+G++G  IMPHN++LHS++VQSR           +A+++ +I+S I L ++F++N  +  + A  F+ +   +  G  +    L+ +   G  +  I+  ++ + LLA+GQ+STITGT AGQ +M GFL L +  W+R LITRS A++P I+  ++F  +   ++ L  +  V  S+ +PF LIPL    S + +MG F    + + +SW ++    I+ ++
Sbjct:  217 ALGIIGATIMPHNLYLHSSIVQSRTYSRHNNEEKAQAIKFATIDSNIQLSIAFVVNCLLLVLGASLFFNSNADDLGGFYDLYHALKTEPVLGATMGAIMSTLFAVALLASGQNSTITGTLAGQIVMEGFLRLHIPNWLRRLITRSLAVIPVIVCLIIFKGNAAKIEQLLVFSQVFLSIALPFCLIPLQLATSNKDLMGPFYNKTWVNIISWTLIIILSILNVY 439
[Close]
BLAST of FC931490 vs. ExPASy Swiss-Prot
Match: MNTH_STAAN (Probable manganese transport protein mntH OS=Staphylococcus aureus (strain N315) GN=mntH PE=1 SV=1)

HSP 1 Score: 136.346 bits (342), Expect = 1.585e-31
Identity = 74/223 (33.18%), Postives = 130/223 (58.30%), Query Frame = 3 
Query:   75 AVGVVGCIIMPHNVFLHSALVQSRDIDNSKKGRVQEALRYYSIESTIALVVSFMINLFVTTVFAKGFYGTEQANNIGLVNAGQYLQEK--YGGGLFPILY-IWGIGLLAAGQSSTITGTYAGQFIMGGFLNLRLKKWMRALITRSCAIVPTIIVALVFDTSEDMLDVLNEWLNVLQSVQIPFALIPLLYLVSQEHIMGTFKLALY*D-VSWLVLSGELIMGIF 731
            A+G++G  IMPHN++LHS++VQSR           +A+++ +I+S I L ++F++N  +  + A  F+ +   +  G  +    L+ +   G  +  I+  ++ + LLA+GQ+STITGT AGQ +M GFL L +  W+R LITRS A++P I+  ++F  +   ++ L  +  V  S+ +PF LIPL    S + +MG F    + + +SW ++    I+ ++
Sbjct:  217 ALGIIGATIMPHNLYLHSSIVQSRTYSRHNNEEKAQAIKFATIDSNIQLSIAFVVNCLLLVLGASLFFNSNADDLGGFYDLYHALKTEPVLGATMGAIMSTLFAVALLASGQNSTITGTLAGQIVMEGFLRLHIPNWLRRLITRSLAVIPVIVCLIIFKGNAAKIEQLLVFSQVFLSIALPFCLIPLQLATSNKDLMGPFYNKTWVNIISWTLIIILSILNVY 439
[Close]
BLAST of FC931490 vs. ExPASy Swiss-Prot
Match: MNTH_STAAM (Probable manganese transport protein mntH OS=Staphylococcus aureus (strain Mu50 / ATCC 700699) GN=mntH PE=3 SV=1)

HSP 1 Score: 136.346 bits (342), Expect = 1.585e-31
Identity = 74/223 (33.18%), Postives = 130/223 (58.30%), Query Frame = 3 
Query:   75 AVGVVGCIIMPHNVFLHSALVQSRDIDNSKKGRVQEALRYYSIESTIALVVSFMINLFVTTVFAKGFYGTEQANNIGLVNAGQYLQEK--YGGGLFPILY-IWGIGLLAAGQSSTITGTYAGQFIMGGFLNLRLKKWMRALITRSCAIVPTIIVALVFDTSEDMLDVLNEWLNVLQSVQIPFALIPLLYLVSQEHIMGTFKLALY*D-VSWLVLSGELIMGIF 731
            A+G++G  IMPHN++LHS++VQSR           +A+++ +I+S I L ++F++N  +  + A  F+ +   +  G  +    L+ +   G  +  I+  ++ + LLA+GQ+STITGT AGQ +M GFL L +  W+R LITRS A++P I+  ++F  +   ++ L  +  V  S+ +PF LIPL    S + +MG F    + + +SW ++    I+ ++
Sbjct:  217 ALGIIGATIMPHNLYLHSSIVQSRTYSRHNNEEKAQAIKFATIDSNIQLSIAFVVNCLLLVLGASLFFNSNADDLGGFYDLYHALKTEPVLGATMGAIMSTLFAVALLASGQNSTITGTLAGQIVMEGFLRLHIPNWLRRLITRSLAVIPVIVCLIIFKGNAAKIEQLLVFSQVFLSIALPFCLIPLQLATSNKDLMGPFYNKTWVNIISWTLIIILSILNVY 439
[Close]
BLAST of FC931490 vs. ExPASy Swiss-Prot
Match: MNTH_STAAE (Probable manganese transport protein mntH OS=Staphylococcus aureus (strain Newman) GN=mntH PE=3 SV=1)

HSP 1 Score: 136.346 bits (342), Expect = 1.585e-31
Identity = 74/223 (33.18%), Postives = 130/223 (58.30%), Query Frame = 3 
Query:   75 AVGVVGCIIMPHNVFLHSALVQSRDIDNSKKGRVQEALRYYSIESTIALVVSFMINLFVTTVFAKGFYGTEQANNIGLVNAGQYLQEK--YGGGLFPILY-IWGIGLLAAGQSSTITGTYAGQFIMGGFLNLRLKKWMRALITRSCAIVPTIIVALVFDTSEDMLDVLNEWLNVLQSVQIPFALIPLLYLVSQEHIMGTFKLALY*D-VSWLVLSGELIMGIF 731
            A+G++G  IMPHN++LHS++VQSR           +A+++ +I+S I L ++F++N  +  + A  F+ +   +  G  +    L+ +   G  +  I+  ++ + LLA+GQ+STITGT AGQ +M GFL L +  W+R LITRS A++P I+  ++F  +   ++ L  +  V  S+ +PF LIPL    S + +MG F    + + +SW ++    I+ ++
Sbjct:  217 ALGIIGATIMPHNLYLHSSIVQSRTYSRHNNEEKAQAIKFATIDSNIQLSIAFVVNCLLLVLGASLFFNSNADDLGGFYDLYHALKTEPVLGATMGAIMSTLFAVALLASGQNSTITGTLAGQIVMEGFLRLHIPNWLRRLITRSLAVIPVIVCLIIFKGNAAKIEQLLVFSQVFLSIALPFCLIPLQLATSNKDLMGPFYNKTWVNIISWTLIIILSILNVY 439
[Close]
BLAST of FC931490 vs. ExPASy Swiss-Prot
Match: MNTH_STAAC (Probable manganese transport protein mntH OS=Staphylococcus aureus (strain COL) GN=mntH PE=3 SV=1)

HSP 1 Score: 136.346 bits (342), Expect = 1.585e-31
Identity = 74/223 (33.18%), Postives = 130/223 (58.30%), Query Frame = 3 
Query:   75 AVGVVGCIIMPHNVFLHSALVQSRDIDNSKKGRVQEALRYYSIESTIALVVSFMINLFVTTVFAKGFYGTEQANNIGLVNAGQYLQEK--YGGGLFPILY-IWGIGLLAAGQSSTITGTYAGQFIMGGFLNLRLKKWMRALITRSCAIVPTIIVALVFDTSEDMLDVLNEWLNVLQSVQIPFALIPLLYLVSQEHIMGTFKLALY*D-VSWLVLSGELIMGIF 731
            A+G++G  IMPHN++LHS++VQSR           +A+++ +I+S I L ++F++N  +  + A  F+ +   +  G  +    L+ +   G  +  I+  ++ + LLA+GQ+STITGT AGQ +M GFL L +  W+R LITRS A++P I+  ++F  +   ++ L  +  V  S+ +PF LIPL    S + +MG F    + + +SW ++    I+ ++
Sbjct:  217 ALGIIGATIMPHNLYLHSSIVQSRTYSRHNNEEKAQAIKFATIDSNIQLSIAFVVNCLLLVLGASLFFNSNADDLGGFYDLYHALKTEPVLGATMGAIMSTLFAVALLASGQNSTITGTLAGQIVMEGFLRLHIPNWLRRLITRSLAVIPVIVCLIIFKGNAAKIEQLLVFSQVFLSIALPFCLIPLQLATSNKDLMGPFYNKTWVNIISWTLIIILSILNVY 439
[Close]
BLAST of FC931490 vs. ExPASy Swiss-Prot
Match: MNTH_STAA9 (Probable manganese transport protein mntH OS=Staphylococcus aureus (strain JH9) GN=mntH PE=3 SV=1)

HSP 1 Score: 136.346 bits (342), Expect = 1.585e-31
Identity = 74/223 (33.18%), Postives = 130/223 (58.30%), Query Frame = 3 
Query:   75 AVGVVGCIIMPHNVFLHSALVQSRDIDNSKKGRVQEALRYYSIESTIALVVSFMINLFVTTVFAKGFYGTEQANNIGLVNAGQYLQEK--YGGGLFPILY-IWGIGLLAAGQSSTITGTYAGQFIMGGFLNLRLKKWMRALITRSCAIVPTIIVALVFDTSEDMLDVLNEWLNVLQSVQIPFALIPLLYLVSQEHIMGTFKLALY*D-VSWLVLSGELIMGIF 731
            A+G++G  IMPHN++LHS++VQSR           +A+++ +I+S I L ++F++N  +  + A  F+ +   +  G  +    L+ +   G  +  I+  ++ + LLA+GQ+STITGT AGQ +M GFL L +  W+R LITRS A++P I+  ++F  +   ++ L  +  V  S+ +PF LIPL    S + +MG F    + + +SW ++    I+ ++
Sbjct:  217 ALGIIGATIMPHNLYLHSSIVQSRTYSRHNNEEKAQAIKFATIDSNIQLSIAFVVNCLLLVLGASLFFNSNADDLGGFYDLYHALKTEPVLGATMGAIMSTLFAVALLASGQNSTITGTLAGQIVMEGFLRLHIPNWLRRLITRSLAVIPVIVCLIIFKGNAAKIEQLLVFSQVFLSIALPFCLIPLQLATSNKDLMGPFYNKTWVNIISWTLIIILSILNVY 439
The following BLAST results are available for this feature:
BLAST of FC931490 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 138
Match NameE-valueIdentityDescription
MNTH_BRUSU1.214e-3138.81Probable manganese transport protein mntH OS=Bruce... [more]
MNTH_BRUME1.214e-3138.81Probable manganese transport protein mntH OS=Bruce... [more]
MNTH_STAAW1.585e-3133.18Probable manganese transport protein mntH OS=Staph... [more]
MNTH_STAAS1.585e-3133.18Probable manganese transport protein mntH OS=Staph... [more]
MNTH_STAAR1.585e-3133.18Probable manganese transport protein mntH OS=Staph... [more]
MNTH_STAAN1.585e-3133.18Probable manganese transport protein mntH OS=Staph... [more]
MNTH_STAAM1.585e-3133.18Probable manganese transport protein mntH OS=Staph... [more]
MNTH_STAAE1.585e-3133.18Probable manganese transport protein mntH OS=Staph... [more]
MNTH_STAAC1.585e-3133.18Probable manganese transport protein mntH OS=Staph... [more]
MNTH_STAA91.585e-3133.18Probable manganese transport protein mntH OS=Staph... [more]

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Properties
Property NameValue
Genbank descriptionC34105F09EF PostHarvP1 Citrus clementina cDNA clone C34105F09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931490 ID=FC931490; Name=FC931490; organism=Citrus clementina; type=EST; length=733bp
GAGACCAAGCCAAGTGGCTCTGAGCTTCTTATTGGCATTTTGGTTCCAAA
ACTCAGTTCCAAACAATACAGCAGGCTGTTGGAGTTGTGGGCTGTATTAT
CATGCCTCATAATGTGTTTTTGCACTCCGCTCTTGTGCAATCAAGAGATA
TTGATAACAGTAAGAAAGGCCGTGTCCAAGAAGCTCTCAGATACTATTCC
ATTGAGTCTACTATTGCCCTTGTTGTTTCATTCATGATCAATCTTTTTGT
TACAACTGTTTTTGCAAAGGGGTTTTATGGTACTGAACAGGCCAATAACA
TTGGCCTCGTAAATGCTGGCCAGTACCTTCAAGAGAAGTACGGAGGTGGA
CTTTTCCCAATTTTATATATCTGGGGTATTGGGTTATTAGCAGCTGGACA
GAGTAGCACCATTACCGGCACTTATGCTGGGCAGTTTATCATGGGAGGTT
TCCTAAATTTGAGGTTGAAAAAATGGATGAGGGCACTGATAACACGGAGC
TGTGCCATTGTCCCAACTATTATTGTTGCACTTGTTTTTGATACCTCTGA
AGACATGTTAGATGTTTTAAATGAATGGCTAAATGTGCTACAGTCAGTTC
AGATCCCTTTTGCTCTTATCCCACTTTTATATTTGGTCTCCCAGGAGCAT
ATCATGGGCACTTTCAAATTGGCCCTATATTAAGATGTTTCATGGCTTGT
GCTGTCTGGTGAACTGATCATGGGTATCTTTGC
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