FC931490

Overview
NameFC931490
Unique NameFC931490
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length733
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC931490 vs. ExPASy Swiss-Prot
Match: MNTH_STAA8 (Probable manganese transport protein mntH OS=Staphylococcus aureus (strain NCTC 8325) GN=mntH PE=3 SV=1)

HSP 1 Score: 136.346 bits (342), Expect = 1.585e-31
Identity = 74/223 (33.18%), Postives = 130/223 (58.30%), Query Frame = 3
Query:   75 AVGVVGCIIMPHNVFLHSALVQSRDIDNSKKGRVQEALRYYSIESTIALVVSFMINLFVTTVFAKGFYGTEQANNIGLVNAGQYLQEK--YGGGLFPILY-IWGIGLLAAGQSSTITGTYAGQFIMGGFLNLRLKKWMRALITRSCAIVPTIIVALVFDTSEDMLDVLNEWLNVLQSVQIPFALIPLLYLVSQEHIMGTFKLALY*D-VSWLVLSGELIMGIF 731
            A+G++G  IMPHN++LHS++VQSR           +A+++ +I+S I L ++F++N  +  + A  F+ +   +  G  +    L+ +   G  +  I+  ++ + LLA+GQ+STITGT AGQ +M GFL L +  W+R LITRS A++P I+  ++F  +   ++ L  +  V  S+ +PF LIPL    S + +MG F    + + +SW ++    I+ ++
Sbjct:  217 ALGIIGATIMPHNLYLHSSIVQSRTYSRHNNEEKAQAIKFATIDSNIQLSIAFVVNCLLLVLGASLFFNSNADDLGGFYDLYHALKTEPVLGATMGAIMSTLFAVALLASGQNSTITGTLAGQIVMEGFLRLHIPNWLRRLITRSLAVIPVIVCLIIFKGNAAKIEQLLVFSQVFLSIALPFCLIPLQLATSNKDLMGPFYNKTWVNIISWTLIIILSILNVY 439          
BLAST of FC931490 vs. ExPASy Swiss-Prot
Match: MNTH_STAA3 (Probable manganese transport protein mntH OS=Staphylococcus aureus (strain USA300) GN=mntH PE=3 SV=1)

HSP 1 Score: 136.346 bits (342), Expect = 1.585e-31
Identity = 74/223 (33.18%), Postives = 130/223 (58.30%), Query Frame = 3
Query:   75 AVGVVGCIIMPHNVFLHSALVQSRDIDNSKKGRVQEALRYYSIESTIALVVSFMINLFVTTVFAKGFYGTEQANNIGLVNAGQYLQEK--YGGGLFPILY-IWGIGLLAAGQSSTITGTYAGQFIMGGFLNLRLKKWMRALITRSCAIVPTIIVALVFDTSEDMLDVLNEWLNVLQSVQIPFALIPLLYLVSQEHIMGTFKLALY*D-VSWLVLSGELIMGIF 731
            A+G++G  IMPHN++LHS++VQSR           +A+++ +I+S I L ++F++N  +  + A  F+ +   +  G  +    L+ +   G  +  I+  ++ + LLA+GQ+STITGT AGQ +M GFL L +  W+R LITRS A++P I+  ++F  +   ++ L  +  V  S+ +PF LIPL    S + +MG F    + + +SW ++    I+ ++
Sbjct:  217 ALGIIGATIMPHNLYLHSSIVQSRTYSRHNNEEKAQAIKFATIDSNIQLSIAFVVNCLLLVLGASLFFNSNADDLGGFYDLYHALKTEPVLGATMGAIMSTLFAVALLASGQNSTITGTLAGQIVMEGFLRLHIPNWLRRLITRSLAVIPVIVCLIIFKGNAAKIEQLLVFSQVFLSIALPFCLIPLQLATSNKDLMGPFYNKTWVNIISWTLIIILSILNVY 439          
BLAST of FC931490 vs. ExPASy Swiss-Prot
Match: MNTH_STAA2 (Probable manganese transport protein mntH OS=Staphylococcus aureus (strain JH1) GN=mntH PE=3 SV=1)

HSP 1 Score: 136.346 bits (342), Expect = 1.585e-31
Identity = 74/223 (33.18%), Postives = 130/223 (58.30%), Query Frame = 3
Query:   75 AVGVVGCIIMPHNVFLHSALVQSRDIDNSKKGRVQEALRYYSIESTIALVVSFMINLFVTTVFAKGFYGTEQANNIGLVNAGQYLQEK--YGGGLFPILY-IWGIGLLAAGQSSTITGTYAGQFIMGGFLNLRLKKWMRALITRSCAIVPTIIVALVFDTSEDMLDVLNEWLNVLQSVQIPFALIPLLYLVSQEHIMGTFKLALY*D-VSWLVLSGELIMGIF 731
            A+G++G  IMPHN++LHS++VQSR           +A+++ +I+S I L ++F++N  +  + A  F+ +   +  G  +    L+ +   G  +  I+  ++ + LLA+GQ+STITGT AGQ +M GFL L +  W+R LITRS A++P I+  ++F  +   ++ L  +  V  S+ +PF LIPL    S + +MG F    + + +SW ++    I+ ++
Sbjct:  217 ALGIIGATIMPHNLYLHSSIVQSRTYSRHNNEEKAQAIKFATIDSNIQLSIAFVVNCLLLVLGASLFFNSNADDLGGFYDLYHALKTEPVLGATMGAIMSTLFAVALLASGQNSTITGTLAGQIVMEGFLRLHIPNWLRRLITRSLAVIPVIVCLIIFKGNAAKIEQLLVFSQVFLSIALPFCLIPLQLATSNKDLMGPFYNKTWVNIISWTLIIILSILNVY 439          
BLAST of FC931490 vs. ExPASy Swiss-Prot
Match: MNTH_STAA1 (Probable manganese transport protein mntH OS=Staphylococcus aureus (strain Mu3 / ATCC 700698) GN=mntH PE=3 SV=1)

HSP 1 Score: 136.346 bits (342), Expect = 1.585e-31
Identity = 74/223 (33.18%), Postives = 130/223 (58.30%), Query Frame = 3
Query:   75 AVGVVGCIIMPHNVFLHSALVQSRDIDNSKKGRVQEALRYYSIESTIALVVSFMINLFVTTVFAKGFYGTEQANNIGLVNAGQYLQEK--YGGGLFPILY-IWGIGLLAAGQSSTITGTYAGQFIMGGFLNLRLKKWMRALITRSCAIVPTIIVALVFDTSEDMLDVLNEWLNVLQSVQIPFALIPLLYLVSQEHIMGTFKLALY*D-VSWLVLSGELIMGIF 731
            A+G++G  IMPHN++LHS++VQSR           +A+++ +I+S I L ++F++N  +  + A  F+ +   +  G  +    L+ +   G  +  I+  ++ + LLA+GQ+STITGT AGQ +M GFL L +  W+R LITRS A++P I+  ++F  +   ++ L  +  V  S+ +PF LIPL    S + +MG F    + + +SW ++    I+ ++
Sbjct:  217 ALGIIGATIMPHNLYLHSSIVQSRTYSRHNNEEKAQAIKFATIDSNIQLSIAFVVNCLLLVLGASLFFNSNADDLGGFYDLYHALKTEPVLGATMGAIMSTLFAVALLASGQNSTITGTLAGQIVMEGFLRLHIPNWLRRLITRSLAVIPVIVCLIIFKGNAAKIEQLLVFSQVFLSIALPFCLIPLQLATSNKDLMGPFYNKTWVNIISWTLIIILSILNVY 439          
BLAST of FC931490 vs. ExPASy Swiss-Prot
Match: MNTH_LACSS (Probable manganese transport protein mntH OS=Lactobacillus sakei subsp. sakei (strain 23K) GN=mntH PE=3 SV=1)

HSP 1 Score: 135.961 bits (341), Expect = 2.070e-31
Identity = 73/200 (36.50%), Postives = 120/200 (60.00%), Query Frame = 3
Query:   75 AVGVVGCIIMPHNVFLHSALVQSRDIDNSKKGRVQEALRYYSIESTIALVVSFMINLFVTTVFAKGFYGTEQ--ANNIGLVNAGQYLQEKYGGGLFPIL-YIWGIGLLAAGQSSTITGTYAGQFIMGGFLNLRLKKWMRALITRSCAIVPTIIVALVFDTSEDMLDVLNEWLNVLQSVQIPFALIPLLYLVSQEHIMGTF 665
            A+G+VG  +MPHN++LHS++ Q+R  D       ++A+++  I+S I L ++F++N  +  + A  FYGT       + L NA Q  +E  G    P+L  ++ + LLA+GQ+STITGT +GQ +M GF+ +++  W R +ITR  +I+P II  + +  +E  ++ L  +  V  S+ +P ++IPL    S E IMG F
Sbjct:  227 ALGIVGATVMPHNLYLHSSIAQARQYDRDDVAEKRKAIKFTVIDSNIQLTIAFVVNCLLLILGAAMFYGTNSDLGRFVDLFNALQN-KEIVGSIASPMLSLLFAVALLASGQNSTITGTLSGQIVMEGFVRMKIPLWARRVITRGLSILPVIIFTVYYHGNEAQVENLLIYSQVFLSIALPVSMIPLTLFTSDEKIMGPF 425          
BLAST of FC931490 vs. ExPASy Swiss-Prot
Match: MNTH_LACBA (Probable manganese transport protein mntH OS=Lactobacillus brevis (strain ATCC 367 / JCM 1170) GN=mntH PE=3 SV=1)

HSP 1 Score: 135.961 bits (341), Expect = 2.070e-31
Identity = 76/223 (34.08%), Postives = 133/223 (59.64%), Query Frame = 3
Query:   75 AVGVVGCIIMPHNVFLHSALVQSRDIDNSKKGRVQEALRYYSIESTIALVVSFMINLFVTTVFAKGFYGTEQ--ANNIGLVNAGQYLQEKYGGGLFPIL-YIWGIGLLAAGQSSTITGTYAGQFIMGGFLNLRLKKWMRALITRSCAIVPTIIVALVFDTSEDMLDVLNEWLNVLQSVQIPFALIPLLYLVSQEHIMGTFKLALY*DV-SWLVLSGELIMGIF 731
            ++G+VG  +MPH+++L S++ Q+R  D   +  V +A+++ +I+S I L ++F++N  +  + A  F+GT       + L NA    Q   G    P+L  ++ + LL++GQSSTITGT AGQ IM GF+NL++  W + LITR  ++ P II A+++  +E  ++ L  +  V  S+ +PFA+IPL+   S + +MG F    +  +  W++    +I+ I+
Sbjct:  228 SLGIVGATVMPHDLYLGSSISQTRSFDRKNRKSVAQAIKFTTIDSNIQLTLAFVVNSLLLILGAALFFGTNSDLGRFVDLFNALSDSQI-VGAIASPMLSMLFALALLSSGQSSTITGTLAGQIIMEGFINLKMPLWAQRLITRLLSVTPVIIFAIIYHGNEAKIEDLLTFSQVFLSIALPFAMIPLVIFTSSKKLMGEFANRTWSKILGWIIAVILIILNIY 449          
BLAST of FC931490 vs. ExPASy Swiss-Prot
Match: MNTH_XYLFT (Probable manganese transport protein mntH OS=Xylella fastidiosa (strain Temecula1 / ATCC 700964) GN=mntH PE=3 SV=1)

HSP 1 Score: 135.191 bits (339), Expect = 3.531e-31
Identity = 84/224 (37.50%), Postives = 130/224 (58.04%), Query Frame = 3
Query:   60 QTIQQAVGVVGCIIMPHNVFLHSALVQSRDIDNSKKGRVQEALRYYSIESTIALVVSFMINLFVTTVFAKGFYGTEQANNIGLVNAGQYLQEKYGGGLFPILYIWGIGLLAAGQSSTITGTYAGQFIMGGFLNLRLKKWMRALITRSCAIVPTI-IVALVFDTSEDMLDVLNEWLNVLQSVQIPFALIPLLYLVSQEHIMGTFKLALY*DVSWLVLSGELIMGI 728
            Q +  A+G+VG  +MPHN++LHS++VQ+R    +  GR + ALR+   +ST+AL+++  IN  +  + A  F+     +   +  A Q L    G G+   L+     LLA+G +ST+T T AGQ +M GFL LRL+ W+R ++TR  AIVP I +VAL  +     L +L++   V+ S+Q+PFA+IPLL  V+   +MG           WL++   LI G+
Sbjct:  238 QALYLAIGIVGATVMPHNLYLHSSIVQTRAYPRTPVGR-RSALRWAVADSTLALMLALFINASILILAAAVFHAQHHFDVEEIEQAYQLLAPVLGVGVAATLF--ATALLASGINSTVTATLAGQIVMEGFLRLRLRPWLRRVLTRGLAIVPVIVVVALYGEQGTGRLLLLSQ---VILSMQLPFAVIPLLRCVADRKVMGALVAP-----RWLMVVAWLIAGV 450          
BLAST of FC931490 vs. ExPASy Swiss-Prot
Match: MNTH_XYLFA (Probable manganese transport protein mntH OS=Xylella fastidiosa GN=mntH PE=3 SV=1)

HSP 1 Score: 135.191 bits (339), Expect = 3.531e-31
Identity = 84/224 (37.50%), Postives = 130/224 (58.04%), Query Frame = 3
Query:   60 QTIQQAVGVVGCIIMPHNVFLHSALVQSRDIDNSKKGRVQEALRYYSIESTIALVVSFMINLFVTTVFAKGFYGTEQANNIGLVNAGQYLQEKYGGGLFPILYIWGIGLLAAGQSSTITGTYAGQFIMGGFLNLRLKKWMRALITRSCAIVPTI-IVALVFDTSEDMLDVLNEWLNVLQSVQIPFALIPLLYLVSQEHIMGTFKLALY*DVSWLVLSGELIMGI 728
            Q +  A+G+VG  +MPHN++LHS++VQ+R    +  GR + ALR+   +ST+AL+++  IN  +  + A  F+     +   +  A Q L    G G+   L+     LLA+G +ST+T T AGQ +M GFL LRL+ W+R ++TR  AIVP I +VAL  +     L +L++   V+ S+Q+PFA+IPLL  V+   +MG           WL++   LI G+
Sbjct:  238 QALYLAIGIVGATVMPHNLYLHSSIVQTRAYPRTPVGR-RSALRWAVADSTLALMLALFINASILILAAAVFHAQHHFDVEEIEQAYQLLAPVLGVGVAATLF--ATALLASGINSTVTATLAGQIVMEGFLRLRLRPWLRRVLTRGLAIVPVIVVVALYGEQGTGRLLLLSQ---VILSMQLPFAVIPLLRCVADRKVMGALVAP-----RWLMVVAWLIAGV 450          
BLAST of FC931490 vs. ExPASy Swiss-Prot
Match: MNTH_STAAB (Probable manganese transport protein mntH OS=Staphylococcus aureus (strain bovine RF122 / ET3-1) GN=mntH PE=3 SV=1)

HSP 1 Score: 135.191 bits (339), Expect = 3.531e-31
Identity = 74/223 (33.18%), Postives = 129/223 (57.85%), Query Frame = 3
Query:   75 AVGVVGCIIMPHNVFLHSALVQSRDIDNSKKGRVQEALRYYSIESTIALVVSFMINLFVTTVFAKGFYGTEQANNIGLVNAGQYLQEK--YGGGLFPILY-IWGIGLLAAGQSSTITGTYAGQFIMGGFLNLRLKKWMRALITRSCAIVPTIIVALVFDTSEDMLDVLNEWLNVLQSVQIPFALIPLLYLVSQEHIMGTFKLALY*D-VSWLVLSGELIMGIF 731
            A+G++G  IMPHN++LHS++VQSR           +A+++ +I+S I L ++F++N  +  + A  F+ +   +  G  +    L+ +   G  +  I+  ++ + LLA+GQ+STITGT AGQ +M GFL L +  W+R LITRS A++P I+   +F  +   ++ L  +  V  S+ +PF LIPL    S + +MG F    + + +SW ++    I+ ++
Sbjct:  217 ALGIIGATIMPHNLYLHSSIVQSRTYSRHNNEEKSQAIKFATIDSNIQLSIAFVVNCLLLVLGASLFFNSNADDLGGFYDLYHALKTEPVLGATMGAIMSTLFAVALLASGQNSTITGTLAGQIVMEGFLRLHIPNWLRRLITRSLAVIPVIVCLSIFKGNAAKIEQLLVFSQVFLSIALPFCLIPLQLATSNKDLMGPFYNKTWVNIISWTLIIILSILNVY 439          
BLAST of FC931490 vs. ExPASy Swiss-Prot
Match: MNTH2_PSEAE (Manganese transport protein mntH2 OS=Pseudomonas aeruginosa GN=mntH2 PE=3 SV=2)

HSP 1 Score: 134.035 bits (336), Expect = 7.866e-31
Identity = 80/208 (38.46%), Postives = 122/208 (58.65%), Query Frame = 3
Query:   75 AVGVVGCIIMPHNVFLHSALVQSRDIDNSKKGRVQEALRYYSIESTIALVVSFMINLFVTTVFAKGFYGTEQANNIGLVNAGQYLQEKYGGGLFPILYIWGIGLLAAGQSSTITGTYAGQFIMGGFLNLRLKKWMRALITRSCAIVPTIIVALVFDTSEDMLDVLNEWLNVLQSVQIPFALIPLLYLVSQEHIMGTFKLALY*DVSWL 698
            A+G+VG  +MPHN++LHS+LVQSR    S  G+ ++ALR+   +S++AL ++ ++N  +  V A  F+       + +  A   L    G  L  +L+   + LLA+G +ST+T T AGQ +M GFL LRL  W R L+TR  A++P ++V L++   ED    L  +  V+ S+Q+P A+IPLL  VS   +MG   LA+     WL
Sbjct:  216 AIGIVGATVMPHNLYLHSSLVQSRAYPRSLAGK-RKALRWAVADSSLALTLALLVNAAILIVAASVFHRNGHTEVVDIEQAHALLSPLLGLELASLLF--AVALLASGLNSTVTTTLAGQIVMEGFLRLRLAPWARRLLTRGVAVLPVLLVTLLY--GEDGTARLLIFSQVILSMQLPLAVIPLLQFVSDRRLMG--PLAIGAGTRWL 416          
The following BLAST results are available for this feature:
BLAST of FC931490 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 138
Match NameE-valueIdentityDescription
MNTH_STAA81.585e-3133.18Probable manganese transport protein mntH OS=Staph... [more]
MNTH_STAA31.585e-3133.18Probable manganese transport protein mntH OS=Staph... [more]
MNTH_STAA21.585e-3133.18Probable manganese transport protein mntH OS=Staph... [more]
MNTH_STAA11.585e-3133.18Probable manganese transport protein mntH OS=Staph... [more]
MNTH_LACSS2.070e-3136.50Probable manganese transport protein mntH OS=Lacto... [more]
MNTH_LACBA2.070e-3134.08Probable manganese transport protein mntH OS=Lacto... [more]
MNTH_XYLFT3.531e-3137.50Probable manganese transport protein mntH OS=Xylel... [more]
MNTH_XYLFA3.531e-3137.50Probable manganese transport protein mntH OS=Xylel... [more]
MNTH_STAAB3.531e-3133.18Probable manganese transport protein mntH OS=Staph... [more]
MNTH2_PSEAE7.866e-3138.46Manganese transport protein mntH2 OS=Pseudomonas a... [more]

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Properties
Property NameValue
Genbank descriptionC34105F09EF PostHarvP1 Citrus clementina cDNA clone C34105F09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931490 ID=FC931490; Name=FC931490; organism=Citrus clementina; type=EST; length=733bp
GAGACCAAGCCAAGTGGCTCTGAGCTTCTTATTGGCATTTTGGTTCCAAA
ACTCAGTTCCAAACAATACAGCAGGCTGTTGGAGTTGTGGGCTGTATTAT
CATGCCTCATAATGTGTTTTTGCACTCCGCTCTTGTGCAATCAAGAGATA
TTGATAACAGTAAGAAAGGCCGTGTCCAAGAAGCTCTCAGATACTATTCC
ATTGAGTCTACTATTGCCCTTGTTGTTTCATTCATGATCAATCTTTTTGT
TACAACTGTTTTTGCAAAGGGGTTTTATGGTACTGAACAGGCCAATAACA
TTGGCCTCGTAAATGCTGGCCAGTACCTTCAAGAGAAGTACGGAGGTGGA
CTTTTCCCAATTTTATATATCTGGGGTATTGGGTTATTAGCAGCTGGACA
GAGTAGCACCATTACCGGCACTTATGCTGGGCAGTTTATCATGGGAGGTT
TCCTAAATTTGAGGTTGAAAAAATGGATGAGGGCACTGATAACACGGAGC
TGTGCCATTGTCCCAACTATTATTGTTGCACTTGTTTTTGATACCTCTGA
AGACATGTTAGATGTTTTAAATGAATGGCTAAATGTGCTACAGTCAGTTC
AGATCCCTTTTGCTCTTATCCCACTTTTATATTTGGTCTCCCAGGAGCAT
ATCATGGGCACTTTCAAATTGGCCCTATATTAAGATGTTTCATGGCTTGT
GCTGTCTGGTGAACTGATCATGGGTATCTTTGC
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