FC931490

Overview
NameFC931490
Unique NameFC931490
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length733
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC931490 vs. ExPASy Swiss-Prot
Match: MNTH_XANAC (Probable manganese transport protein mntH OS=Xanthomonas axonopodis pv. citri GN=mntH PE=3 SV=1)

HSP 1 Score: 133.65 bits (335), Expect = 1.027e-30
Identity = 79/204 (38.73%), Postives = 122/204 (59.80%), Query Frame = 3
Query:   51 TQFQTIQQAVGVVGCIIMPHNVFLHSALVQSRDIDNSKKGRVQEALRYYSIESTIALVVSFMINLFVTTVFAKGFYGTEQANNIGLVNAGQYLQEKYGGGLFPILYIWGIGLLAAGQSSTITGTYAGQFIMGGFLNLRLKKWMRALITRSCAIVPTIIVALVF-DTSEDMLDVLNEWLNVLQSVQIPFALIPLLYLVSQEHIMG 659
            T  Q +  A+G++G  +MPHN++LHS++VQ+R    +  GR + ALR+   +ST+AL+ +  IN  +  + A  F+   + +   +  A   L    G GL   L+   + LLA+G +ST+T T AGQ +M GFL LRL  W+R L+TR  AIVP +IV  ++ +     L VL++   V+ S+Q+PFA+IPL+  VS   +MG
Sbjct:  214 TDPQALYLAIGIIGATVMPHNLYLHSSIVQTRAYPRTDVGR-KSALRWAVTDSTVALMFALFINASILILAAAVFHAQGRTDVQEIEQAHALLAPMLGVGLASTLF--AVALLASGINSTVTATLAGQIVMEGFLQLRLPPWIRRLLTRGIAIVPVVIVTWLYGEAGTARLLVLSQ---VVLSMQLPFAVIPLVRFVSDRQLMG 411          
BLAST of FC931490 vs. ExPASy Swiss-Prot
Match: MNTH_LACPL (Probable manganese transport protein mntH OS=Lactobacillus plantarum GN=mntH PE=3 SV=1)

HSP 1 Score: 132.494 bits (332), Expect = 2.289e-30
Identity = 77/224 (34.38%), Postives = 133/224 (59.38%), Query Frame = 3
Query:   75 AVGVVGCIIMPHNVFLHSALVQSRDIDNSKKGRVQEALRYYSIESTIALVVSFMINLFVTTVFAKGFYGT--EQANNIGLVNA-GQYLQEKYGGGLFPIL-YIWGIGLLAAGQSSTITGTYAGQFIMGGFLNLRLKKWMRALITRSCAIVPTIIVALVFDTSEDMLDVLNEWLNVLQSVQIPFALIPLLYLVSQEHIMGTFKLALY*D-VSWLVLSGELIMGIF 731
            A+G+VG  +MPHN++L S++ Q+R +D S +  V +A+++ +I+S I L V+F++N  +  + A  F+GT  +    + L NA G    +  G    P+L  ++ I LL++GQSSTITGT +GQ IM GF+ L++  W + L+TR  ++ P +  A+ +  +E  ++ L     V  S+ +PFA+IPL+   S   +MG F   ++    +W+V    +I+ I+
Sbjct:  233 ALGIVGATVMPHNLYLGSSISQTRQVDRSDEKEVAKAVKFTTIDSNIQLSVAFVVNSLLLILGAALFFGTKGDLGRFVDLYNALGD--SKVVGSIASPLLSMLFAIALLSSGQSSTITGTLSGQIIMEGFIRLKMPLWAQRLLTRLISVTPVLAFAIYYHGNEAKIEDLLTMSQVFLSIALPFAMIPLVMFTSNRALMGNFTNRVWVKWTAWIVTVILIILNIY 454          
BLAST of FC931490 vs. ExPASy Swiss-Prot
Match: MNTH_AGRT5 (Probable manganese transport protein mntH OS=Agrobacterium tumefaciens (strain C58 / ATCC 33970) GN=mntH PE=3 SV=1)

HSP 1 Score: 132.109 bits (331), Expect = 2.989e-30
Identity = 79/211 (37.44%), Postives = 126/211 (59.72%), Query Frame = 3
Query:   75 AVGVVGCIIMPHNVFLHSALVQSRDIDNSKKGRVQEALRYYSIESTIALVVSFMINLFVTTVFAKGFYGTEQANNIGLVNAGQYLQEKYGGGLFPILYIWGIGLLAAGQSSTITGTYAGQFIMGGFLNLRLKKWMRALITRSCAIVPTIIVALVF-DTSEDMLDVLNEWLNVLQSVQIPFALIPLLYLVSQEHIMGTFKLALY*D-VSWLV 701
            A+G++G  +MPHN++LHS +VQ+R+I  +   + +EAL++ +++STIAL+ + +IN  +  + A  F  T Q N   L  A   L    G  + P L+  G+ LL  G +ST+T T AGQ +M GFL +RL  W+R LITR+ AIVP   V + + D+    L +L +   V+ S+Q+ FA+ PL+   S +  MG  +  L+   ++WL+
Sbjct:  240 ALGILGATVMPHNLYLHSGIVQTREIGPTIAEK-REALKFATLDSTIALMFALLINASILILAAATFNKTGQTNVAELGEAHSLLAPLLGLAIAPTLF--GVALLCCGINSTVTATLAGQIVMEGFLKMRLAPWLRRLITRAIAIVPAAGVTIFYGDSGTGQLLILTQ---VVLSLQLSFAVFPLVMFTSDKAKMGELRSPLWLSAIAWLI 444          
BLAST of FC931490 vs. ExPASy Swiss-Prot
Match: MNTH_XANCP (Probable manganese transport protein mntH OS=Xanthomonas campestris pv. campestris GN=mntH PE=3 SV=1)

HSP 1 Score: 131.724 bits (330), Expect = 3.904e-30
Identity = 76/196 (38.78%), Postives = 119/196 (60.71%), Query Frame = 3
Query:   75 AVGVVGCIIMPHNVFLHSALVQSRDIDNSKKGRVQEALRYYSIESTIALVVSFMINLFVTTVFAKGFYGTEQANNIGLVNAGQYLQEKYGGGLFPILYIWGIGLLAAGQSSTITGTYAGQFIMGGFLNLRLKKWMRALITRSCAIVPTIIVALVF-DTSEDMLDVLNEWLNVLQSVQIPFALIPLLYLVSQEHIMG 659
            A+G++G  +MPHN++LHS++VQ+R    +  GR + ALR+   +ST+AL+ +  IN  +  + A  F+   + +   +  A   L    G GL   L+   + LLA+G +ST+T T AGQ +M GFL LRL  WMR L+TR  AIVP ++V  ++ +     L VL++   V+ S+Q+PFA+IPL+  V+   +MG
Sbjct:  222 AIGIIGATVMPHNLYLHSSIVQTRAYPRTDAGR-RSALRWAVTDSTVALMFALFINAAILILAAAVFHAQGRTDVQEIEQAHALLAPMLGVGLASTLF--AVALLASGVNSTVTATLAGQIVMEGFLRLRLPPWMRRLLTRGIAIVPVVVVTWLYGEAGTARLLVLSQ---VVLSMQLPFAVIPLVRFVADRGLMG 411          
BLAST of FC931490 vs. ExPASy Swiss-Prot
Match: MNTH_RALSO (Probable manganese transport protein mntH OS=Ralstonia solanacearum GN=mntH PE=3 SV=1)

HSP 1 Score: 128.257 bits (321), Expect = 4.316e-29
Identity = 70/198 (35.35%), Postives = 122/198 (61.62%), Query Frame = 3
Query:   75 AVGVVGCIIMPHNVFLHSALVQSRDIDNSKKGRVQEALRYYSIESTIALVVSFMINLFVTTVFAKGFYGTEQANNIGLVNAGQYLQEKYGGGLFPILYIWGIGLLAAGQSSTITGTYAGQFIMGGFLNLRLKKWMRALITRSCAIVPTII-VALVFDTSEDMLDVLNEWLNVLQSVQIPFALIPLLYLVSQEHIMGTF 665
            A+G++G  +MPHN++LHS++VQ+R +  ++  R +EA+    +++ ++L ++ ++N  +  + A  F+     +   + +A + L+   G  +  +L+  GI LLAAGQSST TGT AGQ +M GFL LR+  W R L TR+ A++P  + VA++ D +   L V+++   V+   Q+PFA+ PL+ +     +MGTF
Sbjct:  220 AIGILGATVMPHNLYLHSSIVQTRVVSETEPAR-REAVGLSRLDTIVSLSLALLVNGAILVLAAAAFHANGHQDVADIQDAHRLLEPIVGTAVAGVLF--GIALLAAGQSSTFTGTIAGQILMEGFLELRIPCWQRRLATRALALIPAFVGVAMLGDHAIGRLLVISQ---VVLGFQLPFAMFPLIRMTGDRALMGTF 411          
BLAST of FC931490 vs. ExPASy Swiss-Prot
Match: MNTH_LACBR (Manganese transport protein mntH OS=Lactobacillus brevis GN=mntH PE=2 SV=1)

HSP 1 Score: 128.257 bits (321), Expect = 4.316e-29
Identity = 69/201 (34.33%), Postives = 124/201 (61.69%), Query Frame = 3
Query:   75 AVGVVGCIIMPHNVFLHSALVQSRDIDNSKKGRVQEALRYYSIESTIALVVSFMINLFVTTVFAKGFYGTEQANNIG-LVNAGQYLQEKY--GGGLFPIL-YIWGIGLLAAGQSSTITGTYAGQFIMGGFLNLRLKKWMRALITRSCAIVPTIIVALVFDTSEDMLDVLNEWLNVLQSVQIPFALIPLLYLVSQEHIMGTF 665
            A+G+VG  +MPH+++L S++ Q+R +D   +  V +A+++ +I+S + L ++F++N  +  + A  F+GT   + +G  V+    L   +  G    P+L  ++ + LL++GQSSTITGT +GQ IM GF++LR+  W + L+TR  ++ P +I A+ +  +E  ++ L     V  SV +PFA++PL+   S + +MG F
Sbjct:  233 ALGIVGATVMPHDLYLGSSISQTRAVDRHDRQDVAKAIKFTTIDSNLQLTIAFIVNSLLLILGAALFFGTN--STVGRFVDLFNSLNNSHIVGAIASPMLSMLFAVALLSSGQSSTITGTLSGQIIMEGFIHLRMPLWAQRLLTRLLSVTPVLIFAIYYHGNEAKIENLLTLSQVFLSVALPFAIVPLVKFTSSKELMGEF 431          
BLAST of FC931490 vs. ExPASy Swiss-Prot
Match: MNTH1_PSEAE (Manganese transport protein mntH1 OS=Pseudomonas aeruginosa GN=mntH1 PE=3 SV=2)

HSP 1 Score: 126.716 bits (317), Expect = 1.256e-28
Identity = 73/198 (36.87%), Postives = 117/198 (59.09%), Query Frame = 3
Query:   75 AVGVVGCIIMPHNVFLHSALVQSRDIDNSKKGRVQEALRYYSIESTIALVVSFMINLFVTTVFAKGFYGTEQANNIGLVNAGQYLQEKYGGGLFPILYIWGIGLLAAGQSSTITGTYAGQFIMGGFLNLRLKKWMRALITRSCAIVPTII-VALVFDTSEDMLDVLNEWLNVLQSVQIPFALIPLLYLVSQEHIMGTF 665
            A+G++G  +MPHN++LHS++VQ+R +        + A+R+  +++  +L ++ ++N  +  + A  F+G+     + + +A   L    GG L   L+  G  LLAAGQSST TGT AGQ +M GFL  ++  W R LITR  A+VP +I V  + + +   L VL++   V+ S+Q+PFAL PL+   S   +MG F
Sbjct:  218 AIGILGATVMPHNLYLHSSVVQTR-VSGDDAASKRSAIRFSRLDTIGSLSLALLVNAAILILAAAAFHGSGHTEVVEIQDAYHLLDPLVGGALASFLF--GFALLAAGQSSTFTGTIAGQVVMEGFLRAKIPCWQRRLITRGLALVPALIGVLWLGEAAVGKLLVLSQ---VVLSLQLPFALWPLIRFSSDRGLMGEF 409          
BLAST of FC931490 vs. ExPASy Swiss-Prot
Match: MNTH_CHRSD (Probable manganese transport protein mntH OS=Chromohalobacter salexigens (strain DSM 3043 / ATCC BAA-138 / NCIMB 13768) GN=mntH PE=3 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 1.259e-20
Identity = 64/195 (32.82%), Postives = 109/195 (55.90%), Query Frame = 3
Query:   75 AVGVVGCIIMPHNVFLHSALVQSRDIDNSKKGRVQEALRYYSIESTIALVVSFMINLFVTTVFAKGFYGTEQANNIGLVNAGQYLQEKYGGGLFPILYIWGIGLLAAGQSSTITGTYAGQFIMGGFLNLRLKKWMRALITRSCAIVPTIIVALVFDTSEDMLDVLNEWLNVLQSVQIPFALIPLLYLVSQEHIMG 659
            A G++G  +MPH ++LHSAL Q R        R++  +RYY ++  + + ++ ++NL +  + A  F+ T + +   + ++  YL      G     +++G+ LL AG SS+I GT +GQ IM GF+N+ +  W+R L+T    ++P + V ++   SE    V ++   V+ S  IPFAL+PLL   +   IMG
Sbjct:  214 AAGILGATVMPHVIYLHSALSQQRIQVKDDAHRLR-LMRYYRLDVILGMAIAGLVNLSMLAMAAAVFHATGRLDVATISDS--YLLLAPVVGQVTASHVFGLALLLAGLSSSIVGTLSGQVIMQGFVNVSIPLWLRRLVT----MLPALAV-IMLGISEQKALVASQ---VILSFGIPFALVPLLCFTANRQIMG 397          
BLAST of FC931490 vs. ExPASy Swiss-Prot
Match: MNTH_AERHH (Probable manganese transport protein mntH OS=Aeromonas hydrophila subsp. hydrophila (strain ATCC 7966 / NCIB 9240) GN=mntH PE=3 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 1.392e-19
Identity = 65/198 (32.83%), Postives = 105/198 (53.03%), Query Frame = 3
Query:   75 AVGVVGCIIMPHNVFLHSALVQSRDIDNSKKGRVQEALRYYSIESTIALVVSFMINLFVTTVFAKGFYGTEQANNIGLVNAGQYLQEKYGGGLFPILYIWGIGLLAAGQSSTITGTYAGQFIMGGFLNLRLKKWMRALITRSCAIVPTIIVALVFDTSEDMLDVLNEWLNVLQSVQIPFALIPLLYLVSQEHIMGTFK 668
            A GV+G  +MPH ++LHSAL Q        +G V + L    ++  IA+ ++  +NL +  + A  F+ +       L +A Q L    G     +   +G+ L+A+G SST+ GT AGQ +M GF+   +  W+R  IT + A V   ++A+  +T+E +  VL++   V+ S  I  ALIPLL L     +MG ++
Sbjct:  202 AAGVLGATVMPHVIYLHSALTQH----TQDQGSVPQRLHTTRVDVAIAMTIAGFVNLAMMAMAAAAFHSSGNQQVAELESAYQTLTPLLGQAAATL---FGLSLVASGISSTVVGTLAGQVVMQGFVRFTIPLWLRRAITMAPAFV---VIAMGLNTTEIL--VLSQ---VVLSFGIALALIPLLILTGDRALMGEYR 384          
BLAST of FC931490 vs. ExPASy Swiss-Prot
Match: MNTH_DEIRA (Probable manganese transport protein mntH OS=Deinococcus radiodurans GN=mntH PE=3 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 3.100e-19
Identity = 64/195 (32.82%), Postives = 101/195 (51.79%), Query Frame = 3
Query:   75 AVGVVGCIIMPHNVFLHSALVQSRDIDNSKKGRVQEALRYYSIESTIALVVSFMINLFVTTVFAKGFYGTEQANNIGLVNAGQYLQEKYGGGLFPILYIWGIGLLAAGQSSTITGTYAGQFIMGGFLNLRLKKWMRALITRSCAIVPTIIVALVFDTSEDMLDVLNEWLNVLQSVQIPFALIPLLYLVSQEHIMG 659
            AVG++G  +MPH ++LHSAL Q R I        +  +R   ++   A+ ++ +IN+ +  V A  F+G    N   L  A Q L    G        ++ + LLA+G SS+  GT AG  IM GF+   +  W+R LIT    ++P  IV L+      +L +L++   V+    +PFAL+PLL   ++  +MG
Sbjct:  221 AVGIIGATVMPHVIYLHSALTQGR-IQTDTTEEKRRLVRLNRVDVIAAMGLAGLINMSMLAVAAATFHGKNVENAGDLTTAYQTLTPLLGPAAS---VLFAVALLASGLSSSAVGTMAGDVIMQGFMGFHIPLWLRRLIT----MLPAFIVILLGMDPSSVL-ILSQ---VILCFGVPFALVPLLLFTARRDVMG 403          
The following BLAST results are available for this feature:
BLAST of FC931490 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 138
Match NameE-valueIdentityDescription
MNTH_XANAC1.027e-3038.73Probable manganese transport protein mntH OS=Xanth... [more]
MNTH_LACPL2.289e-3034.38Probable manganese transport protein mntH OS=Lacto... [more]
MNTH_AGRT52.989e-3037.44Probable manganese transport protein mntH OS=Agrob... [more]
MNTH_XANCP3.904e-3038.78Probable manganese transport protein mntH OS=Xanth... [more]
MNTH_RALSO4.316e-2935.35Probable manganese transport protein mntH OS=Ralst... [more]
MNTH_LACBR4.316e-2934.33Manganese transport protein mntH OS=Lactobacillus ... [more]
MNTH1_PSEAE1.256e-2836.87Manganese transport protein mntH1 OS=Pseudomonas a... [more]
MNTH_CHRSD1.259e-2032.82Probable manganese transport protein mntH OS=Chrom... [more]
MNTH_AERHH1.392e-1932.83Probable manganese transport protein mntH OS=Aerom... [more]
MNTH_DEIRA3.100e-1932.82Probable manganese transport protein mntH OS=Deino... [more]

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Properties
Property NameValue
Genbank descriptionC34105F09EF PostHarvP1 Citrus clementina cDNA clone C34105F09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931490 ID=FC931490; Name=FC931490; organism=Citrus clementina; type=EST; length=733bp
GAGACCAAGCCAAGTGGCTCTGAGCTTCTTATTGGCATTTTGGTTCCAAA
ACTCAGTTCCAAACAATACAGCAGGCTGTTGGAGTTGTGGGCTGTATTAT
CATGCCTCATAATGTGTTTTTGCACTCCGCTCTTGTGCAATCAAGAGATA
TTGATAACAGTAAGAAAGGCCGTGTCCAAGAAGCTCTCAGATACTATTCC
ATTGAGTCTACTATTGCCCTTGTTGTTTCATTCATGATCAATCTTTTTGT
TACAACTGTTTTTGCAAAGGGGTTTTATGGTACTGAACAGGCCAATAACA
TTGGCCTCGTAAATGCTGGCCAGTACCTTCAAGAGAAGTACGGAGGTGGA
CTTTTCCCAATTTTATATATCTGGGGTATTGGGTTATTAGCAGCTGGACA
GAGTAGCACCATTACCGGCACTTATGCTGGGCAGTTTATCATGGGAGGTT
TCCTAAATTTGAGGTTGAAAAAATGGATGAGGGCACTGATAACACGGAGC
TGTGCCATTGTCCCAACTATTATTGTTGCACTTGTTTTTGATACCTCTGA
AGACATGTTAGATGTTTTAAATGAATGGCTAAATGTGCTACAGTCAGTTC
AGATCCCTTTTGCTCTTATCCCACTTTTATATTTGGTCTCCCAGGAGCAT
ATCATGGGCACTTTCAAATTGGCCCTATATTAAGATGTTTCATGGCTTGT
GCTGTCTGGTGAACTGATCATGGGTATCTTTGC
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