FC931490

Overview
NameFC931490
Unique NameFC931490
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length733
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig15158 contig Ccv1_Contig15158:733..1466. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC931490 vs. ExPASy Swiss-Prot
Match: MNTH_GRABC (Probable manganese transport protein mntH OS=Granulibacter bethesdensis (strain ATCC BAA-1260 / CGDNIH1) GN=mntH PE=3 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 5.289e-19
Identity = 64/202 (31.68%), Postives = 104/202 (51.49%), Query Frame = 3
Query:   75 AVGVVGCIIMPHNVFLHSALVQSRDIDNSKKGRVQEALRYYSIESTIALVVSFMINLFVTTVFAKGFYGTEQANNIGLVNAGQYLQEKYGGGLFPIL-----YIWGIGLLAAGQSSTITGTYAGQFIMGGFLNLRLKKWMRALITRSCAIVPTIIVALVFDTSEDMLDVLNEWLNVLQSVQIPFALIPLLYLVSQEHIMGTF 665
            A G+VG  +MPH V+LHS L Q+R    +        +R+ + E  +AL ++ M+N+ +  + A  F+       IG  +  +  Q  +   L P+L      I+ I L+ +G SS++ GT AGQ IM GF+++R+  W+R L+T    +VP  IV L    + D L +      V+ S+ +P  +I L+Y      +MG F
Sbjct:  220 ATGIVGATVMPHAVYLHSGLAQNRAAAATDDASRHRLIRFSNREVILALALAGMVNMAMVIMAASAFH-------IGHSDVAEIEQAYH--TLTPLLGAAAAAIFLISLITSGISSSVVGTMAGQMIMQGFVHIRIPVWLRRLVT----MVPAFIVILAGVNATDALVI----SQVILSIALPAPMIALIYFSGHRELMGPF 404          
BLAST of FC931490 vs. ExPASy Swiss-Prot
Match: MNTH_THETN (Probable manganese transport protein mntH OS=Thermoanaerobacter tengcongensis GN=mntH PE=3 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 9.021e-19
Identity = 71/200 (35.50%), Postives = 106/200 (53.00%), Query Frame = 3
Query:   75 AVGVVGCIIMPHNVFLHSALVQSRDIDNSKKGRVQEALRYYSIESTIALVVSFMINLFVTTVFAKGFYGTEQANNIGLVNAGQYLQEKYGGGLFPILYIW--GIGLLAAGQSSTITGTYAGQFIMGGFLNLRLKKWMRALITRSCAIVPTI-IVALVFDTSEDMLDVLNEWLNVLQSVQIPFALIPLLYLVSQEHIMGTF 665
            AVG++G  +MPH ++LHS LVQ R+ D S + + +E L+   I+  +A+  +F+IN  +  V A  FY        G+V        K    L  +   W  GI LLA+G SS+  GT AGQ IM GF+ L +   +R L+T    +VP I I+AL  D  + ++        V+ S ++P A+IPLL + S +  M  F
Sbjct:  205 AVGILGATVMPHVIYLHSQLVQYRNKDGSLQAK-KEHLKMEKIDILVAMNTAFIINAAMLIVSAAVFYKN------GIVIESIEEAHKTLEPLLGVFSSWAFGIALLASGFSSSAVGTMAGQTIMKGFVGLNIPLNVRRLVT----MVPAITIIALGIDPLKSLI-----VSQVVLSFELPMAIIPLLLITSNKKFMKEF 388          
BLAST of FC931490 vs. ExPASy Swiss-Prot
Match: MNTH_BACSU (Manganese transport protein mntH OS=Bacillus subtilis GN=mntH PE=1 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 1.539e-18
Identity = 72/221 (32.58%), Postives = 118/221 (53.39%), Query Frame = 3
Query:   75 AVGVVGCIIMPHNVFLHSALVQSRDIDNSKKGRVQEALRYYSIESTIALVVSFMINLFVTTVFAKGFYGTEQANNIGLVNAGQYLQEKYGGGLFPI-LYIWGIGLLAAGQSSTITGTYAGQFIMGGFLNLRLKKWMRALITRSCAIVPTIIVALVFDTSEDMLDVLNEWLNVLQSVQIPFALIPLLYLVSQEHIMGTFKLALY*D-VSWLVLSGELIMGIF 731
            A G++G  +MPH ++LHSAL Q R +  +   R ++  R+  I+  IA++++  IN  +  V A  F+      N   V       +++G  + P+   ++GIGLL AG SS+  GT +G  IM GF+N R+  ++R  IT    I+P I++ +    +     VL++   V+ S  I FALIPL+   S + IMG+   A +   VSWL+    + + +F
Sbjct:  212 AAGILGATVMPHAIYLHSALTQRRVVGKTDAER-KKIFRFEFIDILIAMLIAGAINASMLIVAAALFF-----KNGLFVEDLDVAFQQFGHLVSPMSAALFGIGLLVAGLSSSSVGTLSGDVIMQGFINYRIPLYVRRFIT----IIPPILI-IASGVNPTTALVLSQ---VVLSFGIAFALIPLIMFTSNKRIMGSLINAKWITVVSWLIAVLIVALNVF 418          
BLAST of FC931490 vs. ExPASy Swiss-Prot
Match: MNTH_VIBHB (Probable manganese transport protein mntH OS=Vibrio harveyi (strain ATCC BAA-1116 / BB120) GN=mntH PE=3 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 2.625e-18
Identity = 64/226 (28.32%), Postives = 112/226 (49.56%), Query Frame = 3
Query:   51 TQFQTIQQAVGVVGCIIMPHNVFLHSALVQSRDIDNSKKGRVQEALRYYSIESTIALVVSFMINLFVTTVFAKGFYGTEQANNIGLVNAGQYLQEKYGGGLFPILYIWGIGLLAAGQSSTITGTYAGQFIMGGFLNLRLKKWMRALITRSCAIVPTIIVALVFDTSEDMLDVLNEWLNVLQSVQIPFALIPLLYLVSQEHIMGTFKLALY*DVSWLVLSGELIMGI 728
            T    I  A G++G  +MPH ++LHSAL +     NS     +  LR    +  IA+V++  +N+ +  + A  F+ +   +   +  A   L    G        ++G+ L+A+G SST+ GT AGQ +M GF+   +  W+R  IT + + V   ++ L  +T++ ++        V+ S  I  A+IPLL   + E +MG FK     +  W+  +G +I+ +
Sbjct:  205 TDSHQIYLAAGILGATVMPHVIYLHSALFK-----NSYGESTKTRLRTTRFDVLIAMVIAGFVNIAIVAMAAAVFHYSGNQHVAEIETAYMTLTPLVGKAAS---VLFGVSLIASGLSSTVVGTMAGQVVMQGFVRFSIPMWVRRFITMAPSFV---VIGLGMNTTDILV-----MSQVVLSFGIALAIIPLLIFTNSERLMGEFK-----NNKWVSYAGVVIVSL 409          
BLAST of FC931490 vs. ExPASy Swiss-Prot
Match: MNTH_YERPY (Probable manganese transport protein mntH OS=Yersinia pseudotuberculosis serotype O:3 (strain YPIII) GN=mntH PE=3 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 1.303e-17
Identity = 65/197 (32.99%), Postives = 100/197 (50.76%), Query Frame = 3
Query:   75 AVGVVGCIIMPHNVFLHSALVQSRDIDNSKKGRVQEALRYYS--IESTIALVVSFMINLFVTTVFAKGFYGTEQANNIGLVNAGQYLQEKYGGGLFPILYIWGIGLLAAGQSSTITGTYAGQFIMGGFLNLRLKKWMRALITRSCAIVPTIIVALVFDTSEDMLDVLNEWLNVLQSVQIPFALIPLLYLVSQEHIMG 659
            A GV+G  IMPH ++LHSAL Q+        G   +  RY S   +  IA+ ++  +NL +    A  F+     N   +  A   LQ   G     +   +G+ L+AAG SST+ GT AGQ +M GF+   +  W+R ++T    ++P+ IV L    +  +L V+++   VL S  I  AL+PLL     + +MG
Sbjct:  200 AAGVLGATIMPHVIYLHSALTQTG-------GEESKTERYASTKFDVAIAMTIAGFVNLAMMATAAAAFHFNGYENIAEIEEAYITLQPLLGNAAATV---FGLSLIAAGLSSTVVGTLAGQVVMQGFVRFYIPMWVRRIVT----MLPSFIVILAGMDATQIL-VMSQ---VLLSFGIALALVPLLVFTGNKELMG 378          
BLAST of FC931490 vs. ExPASy Swiss-Prot
Match: MNTH_YERPS (Probable manganese transport protein mntH OS=Yersinia pseudotuberculosis GN=mntH PE=3 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 1.303e-17
Identity = 65/197 (32.99%), Postives = 100/197 (50.76%), Query Frame = 3
Query:   75 AVGVVGCIIMPHNVFLHSALVQSRDIDNSKKGRVQEALRYYS--IESTIALVVSFMINLFVTTVFAKGFYGTEQANNIGLVNAGQYLQEKYGGGLFPILYIWGIGLLAAGQSSTITGTYAGQFIMGGFLNLRLKKWMRALITRSCAIVPTIIVALVFDTSEDMLDVLNEWLNVLQSVQIPFALIPLLYLVSQEHIMG 659
            A GV+G  IMPH ++LHSAL Q+        G   +  RY S   +  IA+ ++  +NL +    A  F+     N   +  A   LQ   G     +   +G+ L+AAG SST+ GT AGQ +M GF+   +  W+R ++T    ++P+ IV L    +  +L V+++   VL S  I  AL+PLL     + +MG
Sbjct:  200 AAGVLGATIMPHVIYLHSALTQTG-------GEESKTERYASTKFDVAIAMTIAGFVNLAMMATAAAAFHFNGYENIAEIEEAYITLQPLLGNAAATV---FGLSLIAAGLSSTVVGTLAGQVVMQGFVRFYIPMWVRRIVT----MLPSFIVILAGMDATQIL-VMSQ---VLLSFGIALALVPLLVFTGNKELMG 378          
BLAST of FC931490 vs. ExPASy Swiss-Prot
Match: MNTH_YERPP (Probable manganese transport protein mntH OS=Yersinia pestis (strain Pestoides F) GN=mntH PE=3 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 1.303e-17
Identity = 65/197 (32.99%), Postives = 100/197 (50.76%), Query Frame = 3
Query:   75 AVGVVGCIIMPHNVFLHSALVQSRDIDNSKKGRVQEALRYYS--IESTIALVVSFMINLFVTTVFAKGFYGTEQANNIGLVNAGQYLQEKYGGGLFPILYIWGIGLLAAGQSSTITGTYAGQFIMGGFLNLRLKKWMRALITRSCAIVPTIIVALVFDTSEDMLDVLNEWLNVLQSVQIPFALIPLLYLVSQEHIMG 659
            A GV+G  IMPH ++LHSAL Q+        G   +  RY S   +  IA+ ++  +NL +    A  F+     N   +  A   LQ   G     +   +G+ L+AAG SST+ GT AGQ +M GF+   +  W+R ++T    ++P+ IV L    +  +L V+++   VL S  I  AL+PLL     + +MG
Sbjct:  200 AAGVLGATIMPHVIYLHSALTQTG-------GEESKTERYASTKFDVAIAMTIAGFVNLAMMATAAAAFHFNGYENIAEIEEAYITLQPLLGNAAATV---FGLSLIAAGLSSTVVGTLAGQVVMQGFVRFYIPMWVRRIVT----MLPSFIVILAGMDATQIL-VMSQ---VLLSFGIALALVPLLVFTGNKELMG 378          
BLAST of FC931490 vs. ExPASy Swiss-Prot
Match: MNTH_YERPN (Probable manganese transport protein mntH OS=Yersinia pestis bv. Antiqua (strain Nepal516) GN=mntH PE=3 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 1.303e-17
Identity = 65/197 (32.99%), Postives = 100/197 (50.76%), Query Frame = 3
Query:   75 AVGVVGCIIMPHNVFLHSALVQSRDIDNSKKGRVQEALRYYS--IESTIALVVSFMINLFVTTVFAKGFYGTEQANNIGLVNAGQYLQEKYGGGLFPILYIWGIGLLAAGQSSTITGTYAGQFIMGGFLNLRLKKWMRALITRSCAIVPTIIVALVFDTSEDMLDVLNEWLNVLQSVQIPFALIPLLYLVSQEHIMG 659
            A GV+G  IMPH ++LHSAL Q+        G   +  RY S   +  IA+ ++  +NL +    A  F+     N   +  A   LQ   G     +   +G+ L+AAG SST+ GT AGQ +M GF+   +  W+R ++T    ++P+ IV L    +  +L V+++   VL S  I  AL+PLL     + +MG
Sbjct:  200 AAGVLGATIMPHVIYLHSALTQTG-------GEESKTERYASTKFDVAIAMTIAGFVNLAMMATAAAAFHFNGYENIAEIEEAYITLQPLLGNAAATV---FGLSLIAAGLSSTVVGTLAGQVVMQGFVRFYIPMWVRRIVT----MLPSFIVILAGMDATQIL-VMSQ---VLLSFGIALALVPLLVFTGNKELMG 378          
BLAST of FC931490 vs. ExPASy Swiss-Prot
Match: MNTH_YERPE (Probable manganese transport protein mntH OS=Yersinia pestis GN=mntH PE=3 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 1.303e-17
Identity = 65/197 (32.99%), Postives = 100/197 (50.76%), Query Frame = 3
Query:   75 AVGVVGCIIMPHNVFLHSALVQSRDIDNSKKGRVQEALRYYS--IESTIALVVSFMINLFVTTVFAKGFYGTEQANNIGLVNAGQYLQEKYGGGLFPILYIWGIGLLAAGQSSTITGTYAGQFIMGGFLNLRLKKWMRALITRSCAIVPTIIVALVFDTSEDMLDVLNEWLNVLQSVQIPFALIPLLYLVSQEHIMG 659
            A GV+G  IMPH ++LHSAL Q+        G   +  RY S   +  IA+ ++  +NL +    A  F+     N   +  A   LQ   G     +   +G+ L+AAG SST+ GT AGQ +M GF+   +  W+R ++T    ++P+ IV L    +  +L V+++   VL S  I  AL+PLL     + +MG
Sbjct:  200 AAGVLGATIMPHVIYLHSALTQTG-------GEESKTERYASTKFDVAIAMTIAGFVNLAMMATAAAAFHFNGYENIAEIEEAYITLQPLLGNAAATV---FGLSLIAAGLSSTVVGTLAGQVVMQGFVRFYIPMWVRRIVT----MLPSFIVILAGMDATQIL-VMSQ---VLLSFGIALALVPLLVFTGNKELMG 378          
BLAST of FC931490 vs. ExPASy Swiss-Prot
Match: MNTH_YERPB (Probable manganese transport protein mntH OS=Yersinia pseudotuberculosis serotype IB (strain PB1/+) GN=mntH PE=3 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 1.303e-17
Identity = 65/197 (32.99%), Postives = 100/197 (50.76%), Query Frame = 3
Query:   75 AVGVVGCIIMPHNVFLHSALVQSRDIDNSKKGRVQEALRYYS--IESTIALVVSFMINLFVTTVFAKGFYGTEQANNIGLVNAGQYLQEKYGGGLFPILYIWGIGLLAAGQSSTITGTYAGQFIMGGFLNLRLKKWMRALITRSCAIVPTIIVALVFDTSEDMLDVLNEWLNVLQSVQIPFALIPLLYLVSQEHIMG 659
            A GV+G  IMPH ++LHSAL Q+        G   +  RY S   +  IA+ ++  +NL +    A  F+     N   +  A   LQ   G     +   +G+ L+AAG SST+ GT AGQ +M GF+   +  W+R ++T    ++P+ IV L    +  +L V+++   VL S  I  AL+PLL     + +MG
Sbjct:  200 AAGVLGATIMPHVIYLHSALTQTG-------GEESKTERYASTKFDVAIAMTIAGFVNLAMMATAAAAFHFNGYENIAEIEEAYITLQPLLGNAAATV---FGLSLIAAGLSSTVVGTLAGQVVMQGFVRFYIPMWVRRIVT----MLPSFIVILAGMDATQIL-VMSQ---VLLSFGIALALVPLLVFTGNKELMG 378          
The following BLAST results are available for this feature:
BLAST of FC931490 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 138
Match NameE-valueIdentityDescription
MNTH_GRABC5.289e-1931.68Probable manganese transport protein mntH OS=Granu... [more]
MNTH_THETN9.021e-1935.50Probable manganese transport protein mntH OS=Therm... [more]
MNTH_BACSU1.539e-1832.58Manganese transport protein mntH OS=Bacillus subti... [more]
MNTH_VIBHB2.625e-1828.32Probable manganese transport protein mntH OS=Vibri... [more]
MNTH_YERPY1.303e-1732.99Probable manganese transport protein mntH OS=Yersi... [more]
MNTH_YERPS1.303e-1732.99Probable manganese transport protein mntH OS=Yersi... [more]
MNTH_YERPP1.303e-1732.99Probable manganese transport protein mntH OS=Yersi... [more]
MNTH_YERPN1.303e-1732.99Probable manganese transport protein mntH OS=Yersi... [more]
MNTH_YERPE1.303e-1732.99Probable manganese transport protein mntH OS=Yersi... [more]
MNTH_YERPB1.303e-1732.99Probable manganese transport protein mntH OS=Yersi... [more]

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Properties
Property NameValue
Genbank descriptionC34105F09EF PostHarvP1 Citrus clementina cDNA clone C34105F09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931490 ID=FC931490; Name=FC931490; organism=Citrus clementina; type=EST; length=733bp
GAGACCAAGCCAAGTGGCTCTGAGCTTCTTATTGGCATTTTGGTTCCAAA
ACTCAGTTCCAAACAATACAGCAGGCTGTTGGAGTTGTGGGCTGTATTAT
CATGCCTCATAATGTGTTTTTGCACTCCGCTCTTGTGCAATCAAGAGATA
TTGATAACAGTAAGAAAGGCCGTGTCCAAGAAGCTCTCAGATACTATTCC
ATTGAGTCTACTATTGCCCTTGTTGTTTCATTCATGATCAATCTTTTTGT
TACAACTGTTTTTGCAAAGGGGTTTTATGGTACTGAACAGGCCAATAACA
TTGGCCTCGTAAATGCTGGCCAGTACCTTCAAGAGAAGTACGGAGGTGGA
CTTTTCCCAATTTTATATATCTGGGGTATTGGGTTATTAGCAGCTGGACA
GAGTAGCACCATTACCGGCACTTATGCTGGGCAGTTTATCATGGGAGGTT
TCCTAAATTTGAGGTTGAAAAAATGGATGAGGGCACTGATAACACGGAGC
TGTGCCATTGTCCCAACTATTATTGTTGCACTTGTTTTTGATACCTCTGA
AGACATGTTAGATGTTTTAAATGAATGGCTAAATGTGCTACAGTCAGTTC
AGATCCCTTTTGCTCTTATCCCACTTTTATATTTGGTCTCCCAGGAGCAT
ATCATGGGCACTTTCAAATTGGCCCTATATTAAGATGTTTCATGGCTTGT
GCTGTCTGGTGAACTGATCATGGGTATCTTTGC
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