FC931490

Overview
NameFC931490
Unique NameFC931490
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length733
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC931490 vs. ExPASy Swiss-Prot
Match: MNTH_YERPA (Probable manganese transport protein mntH OS=Yersinia pestis bv. Antiqua (strain Antiqua) GN=mntH PE=3 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 1.303e-17
Identity = 65/197 (32.99%), Postives = 100/197 (50.76%), Query Frame = 3
Query:   75 AVGVVGCIIMPHNVFLHSALVQSRDIDNSKKGRVQEALRYYS--IESTIALVVSFMINLFVTTVFAKGFYGTEQANNIGLVNAGQYLQEKYGGGLFPILYIWGIGLLAAGQSSTITGTYAGQFIMGGFLNLRLKKWMRALITRSCAIVPTIIVALVFDTSEDMLDVLNEWLNVLQSVQIPFALIPLLYLVSQEHIMG 659
            A GV+G  IMPH ++LHSAL Q+        G   +  RY S   +  IA+ ++  +NL +    A  F+     N   +  A   LQ   G     +   +G+ L+AAG SST+ GT AGQ +M GF+   +  W+R ++T    ++P+ IV L    +  +L V+++   VL S  I  AL+PLL     + +MG
Sbjct:  200 AAGVLGATIMPHVIYLHSALTQTG-------GEESKTERYASTKFDVAIAMTIAGFVNLAMMATAAAAFHFNGYENIAEIEEAYITLQPLLGNAAATV---FGLSLIAAGLSSTVVGTLAGQVVMQGFVRFYIPMWVRRIVT----MLPSFIVILAGMDATQIL-VMSQ---VLLSFGIALALVPLLVFTGNKELMG 378          
BLAST of FC931490 vs. ExPASy Swiss-Prot
Match: MNTH_YERP3 (Probable manganese transport protein mntH OS=Yersinia pseudotuberculosis serotype O:1b (strain IP 31758) GN=mntH PE=3 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 1.303e-17
Identity = 65/197 (32.99%), Postives = 100/197 (50.76%), Query Frame = 3
Query:   75 AVGVVGCIIMPHNVFLHSALVQSRDIDNSKKGRVQEALRYYS--IESTIALVVSFMINLFVTTVFAKGFYGTEQANNIGLVNAGQYLQEKYGGGLFPILYIWGIGLLAAGQSSTITGTYAGQFIMGGFLNLRLKKWMRALITRSCAIVPTIIVALVFDTSEDMLDVLNEWLNVLQSVQIPFALIPLLYLVSQEHIMG 659
            A GV+G  IMPH ++LHSAL Q+        G   +  RY S   +  IA+ ++  +NL +    A  F+     N   +  A   LQ   G     +   +G+ L+AAG SST+ GT AGQ +M GF+   +  W+R ++T    ++P+ IV L    +  +L V+++   VL S  I  AL+PLL     + +MG
Sbjct:  200 AAGVLGATIMPHVIYLHSALTQTG-------GEESKTERYASTKFDVAIAMTIAGFVNLAMMATAAAAFHFNGYENIAEIEEAYITLQPLLGNAAATV---FGLSLIAAGLSSTVVGTLAGQVVMQGFVRFYIPMWVRRIVT----MLPSFIVILAGMDATQIL-VMSQ---VLLSFGIALALVPLLVFTGNKELMG 378          
BLAST of FC931490 vs. ExPASy Swiss-Prot
Match: MNTH_YERE8 (Probable manganese transport protein mntH OS=Yersinia enterocolitica serotype O:8 / biotype 1B (strain 8081) GN=mntH PE=3 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 4.950e-17
Identity = 64/195 (32.82%), Postives = 101/195 (51.79%), Query Frame = 3
Query:   75 AVGVVGCIIMPHNVFLHSALVQSRDIDNSKKGRVQEALRYYSIESTIALVVSFMINLFVTTVFAKGFYGTEQANNIGLVNAGQYLQEKYGGGLFPILYIWGIGLLAAGQSSTITGTYAGQFIMGGFLNLRLKKWMRALITRSCAIVPTIIVALVFDTSEDMLDVLNEWLNVLQSVQIPFALIPLLYLVSQEHIMG 659
            A GV+G  IMPH ++LHS+L Q+   +NSK  R         ++  IA+ ++  +NL +    A  F+     +   +  A   LQ   G     I   +G+ L+AAG SST+ GT AGQ +M GF+   +  W+R  +T    ++P+ IV L+   +  +L V+++   VL S  I  AL+PLL     + +MG
Sbjct:  200 AAGVLGATIMPHVIYLHSSLTQTAG-ENSKADRYAST----KLDVAIAMTIAGFVNLAMMATAAAAFHFNGYGSIAEIEQAYLTLQPLLGNAAATI---FGLSLVAAGLSSTVVGTLAGQVVMQGFVRFYIPIWVRRTVT----MLPSFIVILMGMDATRIL-VMSQ---VLLSFGIALALVPLLAFTGNKELMG 378          
BLAST of FC931490 vs. ExPASy Swiss-Prot
Match: MNTH_VEREI (Probable manganese transport protein mntH OS=Verminephrobacter eiseniae (strain EF01-2) GN=mntH PE=3 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 4.950e-17
Identity = 64/204 (31.37%), Postives = 107/204 (52.45%), Query Frame = 3
Query:   75 AVGVVGCIIMPHNVFLHSALVQSRDIDNSKKGRVQEALRYYSIESTIALVVSFMINLFVTTVFAKGFY-GTEQANNIGLVNAGQYLQEKYGGGLFPILYIWGIG-----LLAAGQSSTITGTYAGQFIMGGFLNLRLKKWMRALITRSCAIVPTIIVALVFDTSEDMLDVLNEWLNVLQSVQIPFALIPLLYLVSQEHIMGTFK 668
            AVG+VG  +MPH +FLHS L Q R    +++ R    L++ +IE  +AL ++ +IN+ +  + A  F+ G  +   I          E     L P+L I   G     L+A+G SS++ GT AGQ IM GF+  R+  W+R  +T + +     +VAL  + ++ +  VL++   V+ S+ +P  +  LL+      +MG +K
Sbjct:  218 AVGIVGATVMPHALFLHSGLTQRRTPARTERERAV-LLKFSNIEVVVALAIAGLINMAMVIMAAGAFHHGHPEVAEI----------ETAYHTLAPLLGIGAAGVFLLSLIASGISSSVVGTMAGQIIMQGFVEFRIPLWLRRAVTMAPSFA---VVALGVNVTQAL--VLSQ---VVLSLALPLPMAALLWFTCSREVMGAYK 402          
BLAST of FC931490 vs. ExPASy Swiss-Prot
Match: MNTH_PECCP (Probable manganese transport protein mntH OS=Pectobacterium carotovorum subsp. carotovorum (strain PC1) GN=mntH PE=3 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 8.443e-17
Identity = 70/218 (32.11%), Postives = 108/218 (49.54%), Query Frame = 3
Query:   75 AVGVVGCIIMPHNVFLHSALVQSRDIDNSKKGRVQEALRYYS--IESTIALVVSFMINLFVTTVFAKGFYGTEQANNIGLVNAGQYLQEKYGGGLFPILYIWGIGLLAAGQSSTITGTYAGQFIMGGFLNLRLKKWMRALITRSCAIVPTIIVALVFDTSEDMLDVLNEWLNVLQSVQIPFALIPLLYLVSQEHIMGTFKLALY*DVSWLVLSGELIM 722
            A GV+G  IMPH ++LHS+L Q        +G    A RY +  ++  IA+ ++  +NL +    A  F+ +   +   L  A   L+   G        I+G+ L+AAG SST+ GT AGQ +M GF+   +  W+R    RS  ++P+ IV L       +L VL++   V+ S  I  AL+PLL       +MGT       +  W+   G+LI+
Sbjct:  200 AAGVLGATIMPHVIYLHSSLTQH-------EGSHTRAERYSATKVDVAIAMTIAGFVNLAMMATAAAAFHFSGNQDIADLDKAYLTLEPLLGKAA---AVIFGLSLVAAGLSSTVVGTLAGQVVMQGFVRFHIPLWVR----RSVTMLPSFIVILSGMDPTRVL-VLSQ---VVLSFGIALALVPLLSFTGNRELMGTMV-----NGKWVQRIGQLIV 394          
BLAST of FC931490 vs. ExPASy Swiss-Prot
Match: MNTH_CLOAB (Probable manganese transport protein mntH OS=Clostridium acetobutylicum GN=mntH PE=3 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 1.103e-16
Identity = 67/197 (34.01%), Postives = 108/197 (54.82%), Query Frame = 3
Query:   75 AVGVVGCIIMPHNVFLHSALVQSRDIDNSKKGRVQEALRYYSIESTIALVVSFMINLFVTTVFAKGFY--GTEQANNIGLVNAGQYLQEKYGGGLFPILYIWGIGLLAAGQSSTITGTYAGQFIMGGFLNLRLKKWMRALITRSCAIVPTIIVALVFDTSEDMLDVLNEWLNVLQSVQIPFALIPLLYLVSQEHIMG 659
            AVG++G  +MPH ++LHS LVQ R+ ++S K ++   L+   I+  IA+ ++F++N  +  V A  F+  G + +       + Q L      G F      GI LLA+G SS+  GT AGQ IM GF+NL +   +R +IT   A+   II+AL  +    +  VL++   V  S  +PF +I +L +  ++ +MG
Sbjct:  215 AVGMLGATVMPHVIYLHSELVQHRNTNSSDKEKLHH-LKMEKIDILIAMNIAFVVNAAMVIVSAAVFFKHGIKVSTIEEAHRSLQPLLGNLSSGAF------GIALLASGLSSSAVGTMAGQTIMKGFVNLSIPINLRRIITMLPAL---IIIALGINPMRVL--VLSQ---VALSFILPFPIIQMLLIAGRKDLMG 396          
BLAST of FC931490 vs. ExPASy Swiss-Prot
Match: MNTH_BURCM (Probable manganese transport protein mntH OS=Burkholderia ambifaria (strain ATCC BAA-244 / AMMD) GN=mntH PE=3 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 1.103e-16
Identity = 62/206 (30.10%), Postives = 103/206 (50.00%), Query Frame = 3
Query:   75 AVGVVGCIIMPHNVFLHSALVQSRDIDNSKKGRVQEALRYYSIESTIALVVSFMINLFVTTVFAKGFYGTEQANNIGLVNAGQYLQEKYGGGLFPIL-----YIWGIGLLAAGQSSTITGTYAGQFIMGGFLNLRLKKWMRALITRSCAIVPTIIVALVFDTSEDMLDVLNEWLNVLQSVQIPFALIPLLYLVSQEHIMGTFKLAL 677
            AVG++G  IMPH ++LHS L Q R        R +  +R+ + E  +AL ++  +NL +  + A  F+    A+  G+ + G          L P+L      ++ + LL +G SS++ GT AGQ +M GF+  RL  WMR  +T + A     +VA   D +  M+        V+ S  +P  +I LL L ++  +MG + + +
Sbjct:  228 AVGIIGATIMPHTLYLHSGLTQDRIAPRDDTER-RRLMRFSNREVVVALGLAGFVNLAMVMMAASAFH----ASAPGMADIGDAYHT-----LIPVLGPAAGVLFLVALLTSGVSSSVVGTMAGQVVMQGFMRRRLSVWMRRAVTIAPAFA---VVACGCDVTRAMVA-----SQVVLSFVLPMPMIALLILSARNDVMGRYAMRM 415          
BLAST of FC931490 vs. ExPASy Swiss-Prot
Match: MNTH_ENT38 (Probable manganese transport protein mntH OS=Enterobacter sp. (strain 638) GN=mntH PE=3 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 2.457e-16
Identity = 69/216 (31.94%), Postives = 105/216 (48.61%), Query Frame = 3
Query:   75 AVGVVGCIIMPHNVFLHSALVQSRDIDNSKKGRVQEALRYYSIESTIALVVSFMINLFVTTVFAKGFYGTEQANNIGLVNAGQYLQEKYGGGLFPILY-----IWGIGLLAAGQSSTITGTYAGQFIMGGFLNLRLKKWMRALITRSCAIVPTIIVALVFDTSEDMLDVLNEWLNVLQSVQIPFALIPLLYLVSQEHIMGTF-KLALY*DVSWLVL 704
            A GV+G  IMPH ++LHS+L Q     N+  G  QE       +  IA+ ++  +NL +    A  F+         L  A  YL       L P+L      I+G+ L+AAG SST+ GT AGQ +M GF+   +  W+R    RS  ++P+ IV L+       + V+++   VL S  I  AL+PLL     + +MG      L   + W+++
Sbjct:  200 AAGVLGATIMPHVIYLHSSLTQ-----NAHDGTRQERYSATKWDVGIAMTIAGFVNLAMMATAAAAFHFNGHTGVADLDQA--YLT------LEPLLSHAAATIFGLSLVAAGLSSTVVGTLAGQVVMQGFVRFHIPLWVR----RSVTMMPSFIVILM-GLDPTRILVMSQ---VLLSFGIALALVPLLIFTGNKSLMGDLVNTTLVKRIGWMIV 394          
BLAST of FC931490 vs. ExPASy Swiss-Prot
Match: MNTH_KLEP3 (Probable manganese transport protein mntH OS=Klebsiella pneumoniae (strain 342) GN=mntH PE=3 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 1.592e-15
Identity = 64/218 (29.36%), Postives = 105/218 (48.17%), Query Frame = 3
Query:   75 AVGVVGCIIMPHNVFLHSALVQSRDIDNSKKGRVQEALRYYSIESTIALVVSFMINLFVTTVFAKGFYGTEQANNIGLVNAGQYLQEKYGGGLFPILYIWGIGLLAAGQSSTITGTYAGQFIMGGFLNLRLKKWMRALITRSCAIVPTIIVALVFDTSEDMLDVLNEWLNVLQSVQIPFALIPLLYLVSQEHIMGTFKLALY*DVSWLVLSGELIMGI 728
            A GV+G  IMPH ++LHS+L Q   +    +     A R+   +  IA+ ++  +NL +    A  F+         L  A + L+         I   +G+ L+AAG SST+ GT AGQ +M GF+   +  W R  +T    ++P+ +V L+       + V+++   VL S  I  AL+PLL   S   +MG        +  W+ ++G +I+ I
Sbjct:  200 AAGVLGATIMPHVIYLHSSLTQH--LHGGTRKERYNATRW---DVAIAMTIAGFVNLAMMATAAAAFHFNGHTGVADLDQAYRTLEPLLSHAAATI---FGLSLVAAGLSSTVVGTLAGQVVMQGFIRFHIPLWFRRAVT----MLPSFVVILL-GLDPTRILVMSQ---VLLSFGIALALVPLLIFTSNAQLMGDLV-----NTRWVRVTGWVIVAI 396          
BLAST of FC931490 vs. ExPASy Swiss-Prot
Match: PDT1_SCHPO (Manganese transporter pdt1 OS=Schizosaccharomyces pombe GN=pdt1 PE=1 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 2.080e-15
Identity = 63/221 (28.51%), Postives = 100/221 (45.25%), Query Frame = 3
Query:   66 IQQAVGVVGCIIMPHNVFLHSALVQSR----DIDNSKKGRVQEALRYYSIESTIA-----LVVSFMINLFVTTVFAKG---------FYGTEQANNIGLVNAGQYLQEKYG---GGLFPILYIWGIGLLAAGQSSTITGTYAGQFIMGGFLNLRLKKWMRALITRSCAIVPTIIVALVFDTSEDMLDVLNEWLNVLQ---SVQIPFALIPLLYLVSQEHIM 656
            +  ++G++G  +MPH++FL S LVQ+R    D+       V +   Y     TI       +V   ++LF   +F            FY T  A+   L +    L+E      G LF       + LL +G S+    T AGQ +  G++N  L+ W+R +ITR+ AI+P ++V+     S      LN+ LN  Q   S+ +PF   PL+       +M
Sbjct:  257 LYSSIGILGATVMPHSLFLGSGLVQTRLRDLDVRRGNYTPVGDCSDYRPTHETIKHSLTYSIVEVALSLFTFALFTNSSILIVAGAVFYNTSGADTSDLFSIYDLLKEYVSISCGRLF------AVALLFSGMSAGYVCTIAGQIVSEGYINWNLRPWLRRVITRAIAIIPCLVVSAAVGQSG-----LNQVLNASQVCLSILLPFLTFPLVMFTCSRKVM 466          
The following BLAST results are available for this feature:
BLAST of FC931490 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 138
Match NameE-valueIdentityDescription
MNTH_YERPA1.303e-1732.99Probable manganese transport protein mntH OS=Yersi... [more]
MNTH_YERP31.303e-1732.99Probable manganese transport protein mntH OS=Yersi... [more]
MNTH_YERE84.950e-1732.82Probable manganese transport protein mntH OS=Yersi... [more]
MNTH_VEREI4.950e-1731.37Probable manganese transport protein mntH OS=Vermi... [more]
MNTH_PECCP8.443e-1732.11Probable manganese transport protein mntH OS=Pecto... [more]
MNTH_CLOAB1.103e-1634.01Probable manganese transport protein mntH OS=Clost... [more]
MNTH_BURCM1.103e-1630.10Probable manganese transport protein mntH OS=Burkh... [more]
MNTH_ENT382.457e-1631.94Probable manganese transport protein mntH OS=Enter... [more]
MNTH_KLEP31.592e-1529.36Probable manganese transport protein mntH OS=Klebs... [more]
PDT1_SCHPO2.080e-1528.51Manganese transporter pdt1 OS=Schizosaccharomyces ... [more]

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Properties
Property NameValue
Genbank descriptionC34105F09EF PostHarvP1 Citrus clementina cDNA clone C34105F09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931490 ID=FC931490; Name=FC931490; organism=Citrus clementina; type=EST; length=733bp
GAGACCAAGCCAAGTGGCTCTGAGCTTCTTATTGGCATTTTGGTTCCAAA
ACTCAGTTCCAAACAATACAGCAGGCTGTTGGAGTTGTGGGCTGTATTAT
CATGCCTCATAATGTGTTTTTGCACTCCGCTCTTGTGCAATCAAGAGATA
TTGATAACAGTAAGAAAGGCCGTGTCCAAGAAGCTCTCAGATACTATTCC
ATTGAGTCTACTATTGCCCTTGTTGTTTCATTCATGATCAATCTTTTTGT
TACAACTGTTTTTGCAAAGGGGTTTTATGGTACTGAACAGGCCAATAACA
TTGGCCTCGTAAATGCTGGCCAGTACCTTCAAGAGAAGTACGGAGGTGGA
CTTTTCCCAATTTTATATATCTGGGGTATTGGGTTATTAGCAGCTGGACA
GAGTAGCACCATTACCGGCACTTATGCTGGGCAGTTTATCATGGGAGGTT
TCCTAAATTTGAGGTTGAAAAAATGGATGAGGGCACTGATAACACGGAGC
TGTGCCATTGTCCCAACTATTATTGTTGCACTTGTTTTTGATACCTCTGA
AGACATGTTAGATGTTTTAAATGAATGGCTAAATGTGCTACAGTCAGTTC
AGATCCCTTTTGCTCTTATCCCACTTTTATATTTGGTCTCCCAGGAGCAT
ATCATGGGCACTTTCAAATTGGCCCTATATTAAGATGTTTCATGGCTTGT
GCTGTCTGGTGAACTGATCATGGGTATCTTTGC
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