FC931490

Overview
NameFC931490
Unique NameFC931490
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length733
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC931490 vs. ExPASy Swiss-Prot
Match: MNTH_SHIF8 (Manganese transport protein mntH OS=Shigella flexneri serotype 5b (strain 8401) GN=mntH PE=3 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 2.080e-15
Identity = 61/195 (31.28%), Postives = 95/195 (48.72%), Query Frame = 3
Query:   75 AVGVVGCIIMPHNVFLHSALVQSRDIDNSKKGRVQEALRYYSIESTIALVVSFMINLFVTTVFAKGFYGTEQANNIGLVNAGQYLQEKYGGGLFPILYIWGIGLLAAGQSSTITGTYAGQFIMGGFLNLRLKKWMRALITRSCAIVPTIIVALVFDTSEDMLDVLNEWLNVLQSVQIPFALIPLLYLVSQEHIMG 659
            A GV+G  IMPH ++LHS+L Q     +   G  Q+       +  IA+ ++  +NL +    A  F+ +       L  A   LQ         +   +G+ L+AAG SST+ GT AGQ +M GF+   +  W+R  +T    ++P+ IV L+       + V+++   VL S  I  AL+PLL   S   +MG
Sbjct:  200 AAGVLGATIMPHVIYLHSSLTQ-----HLHGGSRQQRYSATKWDVAIAMTIAGFVNLVMMATAAAAFHFSGHTGVADLDEAYLTLQPLLSHAAATV---FGLSLVAAGLSSTVVGTLAGQVVMQGFIRFHIPLWVRRTVT----MLPSFIVILM-GLDPTRILVMSQ---VLLSFGIALALVPLLIFTSDSKLMG 378          
BLAST of FC931490 vs. ExPASy Swiss-Prot
Match: MNTH_ERWT9 (Probable manganese transport protein mntH OS=Erwinia tasmaniensis (strain DSM 17950 / Et1/99) GN=mntH PE=3 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 2.080e-15
Identity = 63/195 (32.31%), Postives = 97/195 (49.74%), Query Frame = 3
Query:   75 AVGVVGCIIMPHNVFLHSALVQSRDIDNSKKGRVQEALRYYSIESTIALVVSFMINLFVTTVFAKGFYGTEQANNIGLVNAGQYLQEKYGGGLFPILYIWGIGLLAAGQSSTITGTYAGQFIMGGFLNLRLKKWMRALITRSCAIVPTIIVALVFDTSEDMLDVLNEWLNVLQSVQIPFALIPLLYLVSQEHIMG 659
            A GV+G  IMPH ++LHS+L Q+     S+  R         ++  IA+ ++  +NL +    A  F+ +  +    L  A   L    G        ++G+ LLAAG SST+ GT AGQ +M GF++  +   +R +IT    ++P+ IV L       +L V+++   VL S  I  ALIPLL       +MG
Sbjct:  200 AAGVLGATIMPHVIYLHSSLTQNSGDQGSRSERYSST----KLDVAIAMTIAGFVNLAMMATAAATFHFSGHSGVADLDQAYLTLDPLLGKAA---ALVFGLSLLAAGLSSTVVGTMAGQVVMQGFIHFHIPLLLRRVIT----MLPSFIVILAGWEPTRIL-VMSQ---VLLSFGIALALIPLLAFTGNPGLMG 379          
BLAST of FC931490 vs. ExPASy Swiss-Prot
Match: MNTH_BLOPB (Probable manganese transport protein mntH OS=Blochmannia pennsylvanicus (strain BPEN) GN=mntH PE=3 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 2.080e-15
Identity = 69/225 (30.67%), Postives = 110/225 (48.89%), Query Frame = 3
Query:   75 AVGVVGCIIMPHNVFLHSALVQSRDIDNSKKGRVQEALRYYSIESTIALVVSFMINLFVTTVFAKGFYGTEQANNIGLVNAGQYLQEKYGGGLFPIL-----YIWGIGLLAAGQSSTITGTYAGQFIMGGFLNLRLKKWMRALITRSCAIVPTIIVALVFDTSEDMLDVLNEWLNVLQSVQIPFALIPLLYLVSQEHIMGTFKLALY*D-VSWLVLSGELIMGIF 731
            + GV+G  IMPH ++LHS+L Q    D SK     E      ++  IA+ ++  +NL +    A  F+        G+ N    L E Y   L P+L      ++G+ L AAG SST+ GT AGQ +M GF+   +   +R +IT    ++P+ IV + F      + ++++   VL S  I  ALIPLL       +M     +L+   + WL+    +I+ I+
Sbjct:  200 SAGVLGATIMPHVIYLHSSLTQ----DESKTASRSERYSSTKLDVAIAMTIAGFVNLSMMATAAAVFH---YGGYTGISN----LDEAYLT-LSPLLNHTAAIVFGLSLTAAGLSSTVVGTLAGQVVMQGFVRFHIPLLLRRVIT----MLPSFIV-ISFGIDSTRILIMSQ---VLLSFGIALALIPLLVFTGNVKLMNELVNSLWIKLIGWLITIVVIILNIY 404          
BLAST of FC931490 vs. ExPASy Swiss-Prot
Match: MNTH_ACICJ (Probable manganese transport protein mntH OS=Acidiphilium cryptum (strain JF-5) GN=mntH PE=3 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 2.080e-15
Identity = 62/200 (31.00%), Postives = 104/200 (52.00%), Query Frame = 3
Query:   75 AVGVVGCIIMPHNVFLHSALVQSRDIDNSKKGRVQEALRYYSIESTIALVVSFMINLFVTTVFAKGFYGTEQANNIGLVNAGQYLQEKYGGGLFPIL-----YIWGIGLLAAGQSSTITGTYAGQFIMGGFLNLRLKKWMRALITRSCAIVPTIIVALVFDTSEDMLDVLNEWLNVLQSVQIPFALIPLLYLVSQEHIMG 659
            AVG+VG  +MPH +FLHS L  +R        R +  +RY +IE   AL V+ M+N+ +  + A  F+   Q    G+   G+  +      L P+L      I+ I LLA+G SS++ GT AGQ +M GF+   +  W+R    R+  ++P  +V +    +     VL++   V+ S+ +P  ++ LL+  ++  +MG
Sbjct:  213 AVGIVGATVMPHALFLHSGLSGARVAPQDAAQR-RRLVRYSNIEVLAALGVAGMVNMAMVAMAAGAFHPAHQ----GIAEIGEAYRT-----LSPLLGAGAAVIFLISLLASGVSSSVVGTLAGQMVMQGFVGFSIPIWLR----RALTMIPGFVV-IGLGVNPTRALVLSQ---VVLSLALPVPMLALLWFSTRRALMG 394          
BLAST of FC931490 vs. ExPASy Swiss-Prot
Match: MNTH_SHISS (Manganese transport protein mntH OS=Shigella sonnei (strain Ss046) GN=mntH PE=3 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 2.716e-15
Identity = 61/195 (31.28%), Postives = 95/195 (48.72%), Query Frame = 3
Query:   75 AVGVVGCIIMPHNVFLHSALVQSRDIDNSKKGRVQEALRYYSIESTIALVVSFMINLFVTTVFAKGFYGTEQANNIGLVNAGQYLQEKYGGGLFPILYIWGIGLLAAGQSSTITGTYAGQFIMGGFLNLRLKKWMRALITRSCAIVPTIIVALVFDTSEDMLDVLNEWLNVLQSVQIPFALIPLLYLVSQEHIMG 659
            A GV+G  IMPH ++LHS+L Q     +   G  Q+       +  IA+ ++  +NL +    A  F+ +       L  A   LQ         +   +G+ L+AAG SST+ GT AGQ +M GF+   +  W+R  +T    ++P+ IV L+       + V+++   VL S  I  AL+PLL   S   +MG
Sbjct:  200 AAGVLGATIMPHVIYLHSSLTQ-----HLHGGSRQQRYSATKWDVAIAMTIAGFVNLAMMATAAAAFHFSGHTGVADLDEAYLTLQPLLSHAAATV---FGLSLVAAGLSSTVVGTLAGQVVMQGFIRFHIPLWVRRTVT----MLPSFIVILM-GLDPTRILVMSQ---VLLSFGIALALVPLLIFTSDSKLMG 378          
BLAST of FC931490 vs. ExPASy Swiss-Prot
Match: MNTH_SHIBS (Manganese transport protein mntH OS=Shigella boydii serotype 4 (strain Sb227) GN=mntH PE=3 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 2.716e-15
Identity = 61/195 (31.28%), Postives = 95/195 (48.72%), Query Frame = 3
Query:   75 AVGVVGCIIMPHNVFLHSALVQSRDIDNSKKGRVQEALRYYSIESTIALVVSFMINLFVTTVFAKGFYGTEQANNIGLVNAGQYLQEKYGGGLFPILYIWGIGLLAAGQSSTITGTYAGQFIMGGFLNLRLKKWMRALITRSCAIVPTIIVALVFDTSEDMLDVLNEWLNVLQSVQIPFALIPLLYLVSQEHIMG 659
            A GV+G  IMPH ++LHS+L Q     +   G  Q+       +  IA+ ++  +NL +    A  F+ +       L  A   LQ         +   +G+ L+AAG SST+ GT AGQ +M GF+   +  W+R  +T    ++P+ IV L+       + V+++   VL S  I  AL+PLL   S   +MG
Sbjct:  200 AAGVLGATIMPHVIYLHSSLTQ-----HLHGGSRQQRYSATKWDVAIAMTIAGFVNLAMMATAAAAFHFSGHTGVADLDEAYLTLQPLLSHAAATV---FGLSLVAAGLSSTVVGTLAGQVVMQGFIRFHIPLWVRRTVT----MLPSFIVILM-GLDPTRILVMSQ---VLLSFGIALALVPLLIFTSDSKLMG 378          
BLAST of FC931490 vs. ExPASy Swiss-Prot
Match: MNTH_SHIB3 (Manganese transport protein mntH OS=Shigella boydii serotype 18 (strain CDC 3083-94 / BS512) GN=mntH PE=3 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 2.716e-15
Identity = 61/195 (31.28%), Postives = 95/195 (48.72%), Query Frame = 3
Query:   75 AVGVVGCIIMPHNVFLHSALVQSRDIDNSKKGRVQEALRYYSIESTIALVVSFMINLFVTTVFAKGFYGTEQANNIGLVNAGQYLQEKYGGGLFPILYIWGIGLLAAGQSSTITGTYAGQFIMGGFLNLRLKKWMRALITRSCAIVPTIIVALVFDTSEDMLDVLNEWLNVLQSVQIPFALIPLLYLVSQEHIMG 659
            A GV+G  IMPH ++LHS+L Q     +   G  Q+       +  IA+ ++  +NL +    A  F+ +       L  A   LQ         +   +G+ L+AAG SST+ GT AGQ +M GF+   +  W+R  +T    ++P+ IV L+       + V+++   VL S  I  AL+PLL   S   +MG
Sbjct:  200 AAGVLGATIMPHVIYLHSSLTQ-----HLHGGSRQQRYSATKWDVAIAMTIAGFVNLAMMATAAAAFHFSGHTGVADLDEAYLTLQPLLSHAAATV---FGLSLVAAGLSSTVVGTLAGQVVMQGFIRFHIPLWVRRTVT----MLPSFIVILM-GLDPTRILVMSQ---VLLSFGIALALVPLLIFTSDSKLMG 378          
BLAST of FC931490 vs. ExPASy Swiss-Prot
Match: MNTH_ESCF3 (Manganese transport protein mntH OS=Escherichia fergusonii (strain ATCC 35469 / DSM 13698 / CDC 0568-73) GN=mntH PE=3 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 2.716e-15
Identity = 61/195 (31.28%), Postives = 95/195 (48.72%), Query Frame = 3
Query:   75 AVGVVGCIIMPHNVFLHSALVQSRDIDNSKKGRVQEALRYYSIESTIALVVSFMINLFVTTVFAKGFYGTEQANNIGLVNAGQYLQEKYGGGLFPILYIWGIGLLAAGQSSTITGTYAGQFIMGGFLNLRLKKWMRALITRSCAIVPTIIVALVFDTSEDMLDVLNEWLNVLQSVQIPFALIPLLYLVSQEHIMG 659
            A GV+G  IMPH ++LHS+L Q     +   G  Q+       +  IA+ ++  +NL +    A  F+ +       L  A   LQ         +   +G+ L+AAG SST+ GT AGQ +M GF+   +  W+R  +T    ++P+ IV L+       + V+++   VL S  I  AL+PLL   S   +MG
Sbjct:  200 AAGVLGATIMPHVIYLHSSLTQ-----HLHGGSRQQRYSATKWDVAIAMTIAGFVNLAMMATAAAAFHFSGHTGVADLDEAYLTLQPLLSHAAATV---FGLSLVAAGLSSTVVGTLAGQVVMQGFIRFHIPLWVRRTVT----MLPSFIVILM-GLDPTRILVMSQ---VLLSFGIALALVPLLIFTSDSKLMG 378          
BLAST of FC931490 vs. ExPASy Swiss-Prot
Match: MNTH_ENTS8 (Probable manganese transport protein mntH OS=Enterobacter sakazakii (strain ATCC BAA-894) GN=mntH PE=3 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 2.716e-15
Identity = 66/199 (33.17%), Postives = 101/199 (50.75%), Query Frame = 3
Query:   75 AVGVVGCIIMPHNVFLHSALVQSRDIDNSKKGRVQEALRYYSIESTIALVVSFMINLFVTTVFAKGFYGTEQANNIGLVNAGQYLQEKYGGGLFPILY-----IWGIGLLAAGQSSTITGTYAGQFIMGGFLNLRLKKWMRALITRSCAIVPTIIVALVFDTSEDMLDVLNEWLNVLQSVQIPFALIPLLYLVSQEHIM 656
            A GV+G  IMPH ++LHS+L Q+   D S+K R          +  IA+ ++  +NL +    A  F+ +       L  A  YL       L P+L      I+G+ L+AAG SST+ GT AGQ +M GF+   +  W+R  +T    + P+ IV L+       + V+++   VL S  I  AL+PLL+  S + +M
Sbjct:  200 AAGVLGATIMPHVIYLHSSLTQNLH-DGSRKERYSAT----KWDVAIAMTIAGFVNLAMMATAAAAFHFSGHTKVAELDQA--YLT------LEPLLSHAAATIFGLSLVAAGLSSTVVGTLAGQVVMQGFVRFSIPLWVRRAVT----MAPSFIVILM-GLDPTRILVMSQ---VLLSFGIALALVPLLFFTSNKALM 377          
BLAST of FC931490 vs. ExPASy Swiss-Prot
Match: MNTH_ECOUT (Manganese transport protein mntH OS=Escherichia coli (strain UTI89 / UPEC) GN=mntH PE=3 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 2.716e-15
Identity = 61/195 (31.28%), Postives = 95/195 (48.72%), Query Frame = 3
Query:   75 AVGVVGCIIMPHNVFLHSALVQSRDIDNSKKGRVQEALRYYSIESTIALVVSFMINLFVTTVFAKGFYGTEQANNIGLVNAGQYLQEKYGGGLFPILYIWGIGLLAAGQSSTITGTYAGQFIMGGFLNLRLKKWMRALITRSCAIVPTIIVALVFDTSEDMLDVLNEWLNVLQSVQIPFALIPLLYLVSQEHIMG 659
            A GV+G  IMPH ++LHS+L Q     +   G  Q+       +  IA+ ++  +NL +    A  F+ +       L  A   LQ         +   +G+ L+AAG SST+ GT AGQ +M GF+   +  W+R  +T    ++P+ IV L+       + V+++   VL S  I  AL+PLL   S   +MG
Sbjct:  200 AAGVLGATIMPHVIYLHSSLTQ-----HLHGGSRQQRYSATKWDVAIAMTIAGFVNLAMMATAAAAFHFSGHTGVADLDEAYLTLQPLLSHAAATV---FGLSLVAAGLSSTVVGTLAGQVVMQGFIRFHIPLWVRRTVT----MLPSFIVILM-GLDPTRILVMSQ---VLLSFGIALALVPLLIFTSDSKLMG 378          
The following BLAST results are available for this feature:
BLAST of FC931490 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 138
Match NameE-valueIdentityDescription
MNTH_SHIF82.080e-1531.28Manganese transport protein mntH OS=Shigella flexn... [more]
MNTH_ERWT92.080e-1532.31Probable manganese transport protein mntH OS=Erwin... [more]
MNTH_BLOPB2.080e-1530.67Probable manganese transport protein mntH OS=Bloch... [more]
MNTH_ACICJ2.080e-1531.00Probable manganese transport protein mntH OS=Acidi... [more]
MNTH_SHISS2.716e-1531.28Manganese transport protein mntH OS=Shigella sonne... [more]
MNTH_SHIBS2.716e-1531.28Manganese transport protein mntH OS=Shigella boydi... [more]
MNTH_SHIB32.716e-1531.28Manganese transport protein mntH OS=Shigella boydi... [more]
MNTH_ESCF32.716e-1531.28Manganese transport protein mntH OS=Escherichia fe... [more]
MNTH_ENTS82.716e-1533.17Probable manganese transport protein mntH OS=Enter... [more]
MNTH_ECOUT2.716e-1531.28Manganese transport protein mntH OS=Escherichia co... [more]

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Properties
Property NameValue
Genbank descriptionC34105F09EF PostHarvP1 Citrus clementina cDNA clone C34105F09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931490 ID=FC931490; Name=FC931490; organism=Citrus clementina; type=EST; length=733bp
GAGACCAAGCCAAGTGGCTCTGAGCTTCTTATTGGCATTTTGGTTCCAAA
ACTCAGTTCCAAACAATACAGCAGGCTGTTGGAGTTGTGGGCTGTATTAT
CATGCCTCATAATGTGTTTTTGCACTCCGCTCTTGTGCAATCAAGAGATA
TTGATAACAGTAAGAAAGGCCGTGTCCAAGAAGCTCTCAGATACTATTCC
ATTGAGTCTACTATTGCCCTTGTTGTTTCATTCATGATCAATCTTTTTGT
TACAACTGTTTTTGCAAAGGGGTTTTATGGTACTGAACAGGCCAATAACA
TTGGCCTCGTAAATGCTGGCCAGTACCTTCAAGAGAAGTACGGAGGTGGA
CTTTTCCCAATTTTATATATCTGGGGTATTGGGTTATTAGCAGCTGGACA
GAGTAGCACCATTACCGGCACTTATGCTGGGCAGTTTATCATGGGAGGTT
TCCTAAATTTGAGGTTGAAAAAATGGATGAGGGCACTGATAACACGGAGC
TGTGCCATTGTCCCAACTATTATTGTTGCACTTGTTTTTGATACCTCTGA
AGACATGTTAGATGTTTTAAATGAATGGCTAAATGTGCTACAGTCAGTTC
AGATCCCTTTTGCTCTTATCCCACTTTTATATTTGGTCTCCCAGGAGCAT
ATCATGGGCACTTTCAAATTGGCCCTATATTAAGATGTTTCATGGCTTGT
GCTGTCTGGTGAACTGATCATGGGTATCTTTGC
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