FC931492

Overview
NameFC931492
Unique NameFC931492
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length697
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC931492 vs. ExPASy Swiss-Prot
Match: HSP7C_BOVIN (Heat shock cognate 71 kDa protein OS=Bos taurus GN=HSPA8 PE=1 SV=2)

HSP 1 Score: 174.866 bits (442), Expect = 3.694e-43
Identity = 97/225 (43.11%), Postives = 137/225 (60.89%), Query Frame = 3
Query:    6 ATQDAIHKLSSETSVQINVD-LGNGLKVSKNVTREEFEEVNQKVFEKCGSLITQCLHDAKVEIEDLNDVILVGGCSYIPKVRNLIQSTCKKVELYEGINPLEAAVSGAALEGAVTSGINDPFGNL-DLLTIQVTPLGIGIRANGNNFVPIIPRNTTMPARKDLVFTTVRDNQSEALIIVYEGEGEKVEENHLLGYFKITGIPPSPKGVPEINVCMDIDASSVLRV 674
            A + A   LSS T   I +D L  G+    ++TR  FEE+N  +F      + + L DAK++   ++D++LVGG + IPK++ L+Q      EL + INP EA   GAA++ A+ SG  D   N+ DLL + VTPL +GI   G     +I RNTT+P ++   FTT  DNQ   LI VYEGE    ++N+LLG F++TGIPP+P+GVP+I V  DIDA+ +L V
Sbjct:  266 ACERAKRTLSSSTQASIEIDSLYEGIDFYTSITRARFEELNADLFRGTLDPVEKALRDAKLDKSQIHDIVLVGGSTRIPKIQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAILSG--DKSENVQDLLLLDVTPLSLGIETAGGVMTVLIKRNTTIPTKQTQTFTTYSDNQPGVLIQVYEGERAMTKDNNLLGKFELTGIPPAPRGVPQIEVTFDIDANGILNV 488          
BLAST of FC931492 vs. ExPASy Swiss-Prot
Match: GRP78_NEUCR (78 kDa glucose-regulated protein homolog OS=Neurospora crassa GN=grp78 PE=3 SV=3)

HSP 1 Score: 174.866 bits (442), Expect = 3.694e-43
Identity = 93/222 (41.89%), Postives = 139/222 (62.61%), Query Frame = 3
Query:   12 QDAIHKLSSETSVQINVD-LGNGLKVSKNVTREEFEEVNQKVFEKCGSLITQCLHDAKVEIEDLNDVILVGGCSYIPKVRNLIQSTCKKVELYEGINPLEAAVSGAALEGAVTSGINDPFGNLDLLTIQVTPLGIGIRANGNNFVPIIPRNTTMPARKDLVFTTVRDNQSEALIIVYEGEGEKVEENHLLGYFKITGIPPSPKGVPEINVCMDIDASSVLRV 674
            + A   LSS+ S +I ++   +G   S+ +TR +FEE+N  +F+K    + Q L DAKV   +++D++LVGG + IPKV+ LI+      +  +GINP EA   GAA++  V SG     G  D++ + V PL +GI   G     +IPRNT +P RK  +F+T  DNQ   LI VYEGE    ++N+LLG F++TGIPP+P+GVP+I V  ++DA+ +L+V
Sbjct:  302 EKAKRTLSSQMSTRIEIEAFYDGKDFSETLTRAKFEELNNDLFKKTLKPVEQVLKDAKVSKSEIDDIVLVGGSTRIPKVQALIEEFFNGKKASKGINPDEAVAFGAAVQAGVLSGEE---GTEDIVLMDVNPLTLGIETTGGVMTKLIPRNTPIPTRKSQIFSTAADNQPVVLIQVYEGERSMTKDNNLLGKFELTGIPPAPRGVPQIEVSFELDANGILKV 520          
BLAST of FC931492 vs. ExPASy Swiss-Prot
Match: HSP72_RAT (Heat shock-related 70 kDa protein 2 OS=Rattus norvegicus GN=Hspa2 PE=2 SV=2)

HSP 1 Score: 174.481 bits (441), Expect = 4.824e-43
Identity = 96/225 (42.67%), Postives = 136/225 (60.44%), Query Frame = 3
Query:    6 ATQDAIHKLSSETSVQINVD-LGNGLKVSKNVTREEFEEVNQKVFEKCGSLITQCLHDAKVEIEDLNDVILVGGCSYIPKVRNLIQSTCKKVELYEGINPLEAAVSGAALEGAVTSGINDPFGNL-DLLTIQVTPLGIGIRANGNNFVPIIPRNTTMPARKDLVFTTVRDNQSEALIIVYEGEGEKVEENHLLGYFKITGIPPSPKGVPEINVCMDIDASSVLRV 674
            A + A   LSS T   I +D L  G+    ++TR  FEE+N  +F      + + L DAK++   + +++LVGG + IPK++ L+Q      EL + INP EA   GAA++ A+  G  D   N+ DLL + VTPL +GI   G    P+I RNTT+P ++   FTT  DNQS  L+ VYEGE    ++N+LLG F +TGIPP+P+GVP+I V  DIDA+ +L V
Sbjct:  269 ACERAKRTLSSSTQASIEIDSLYEGVDFYTSITRARFEELNADLFRGTLEPVEKALRDAKLDKGQIQEIVLVGGSTRIPKIQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAILIG--DKSENVQDLLLLDVTPLSLGIETAGGVMTPLIKRNTTIPTKQTQTFTTYSDNQSSVLVQVYEGERAMTKDNNLLGKFDLTGIPPAPRGVPQIEVTFDIDANGILNV 491          
BLAST of FC931492 vs. ExPASy Swiss-Prot
Match: HSP72_MOUSE (Heat shock-related 70 kDa protein 2 OS=Mus musculus GN=Hspa2 PE=1 SV=1)

HSP 1 Score: 174.481 bits (441), Expect = 4.824e-43
Identity = 96/225 (42.67%), Postives = 136/225 (60.44%), Query Frame = 3
Query:    6 ATQDAIHKLSSETSVQINVD-LGNGLKVSKNVTREEFEEVNQKVFEKCGSLITQCLHDAKVEIEDLNDVILVGGCSYIPKVRNLIQSTCKKVELYEGINPLEAAVSGAALEGAVTSGINDPFGNL-DLLTIQVTPLGIGIRANGNNFVPIIPRNTTMPARKDLVFTTVRDNQSEALIIVYEGEGEKVEENHLLGYFKITGIPPSPKGVPEINVCMDIDASSVLRV 674
            A + A   LSS T   I +D L  G+    ++TR  FEE+N  +F      + + L DAK++   + +++LVGG + IPK++ L+Q      EL + INP EA   GAA++ A+  G  D   N+ DLL + VTPL +GI   G    P+I RNTT+P ++   FTT  DNQS  L+ VYEGE    ++N+LLG F +TGIPP+P+GVP+I V  DIDA+ +L V
Sbjct:  269 ACERAKRTLSSSTQASIEIDSLYEGVDFYTSITRARFEELNADLFRGTLEPVEKALRDAKLDKGQIQEIVLVGGSTRIPKIQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAILIG--DKSENVQDLLLLDVTPLSLGIETAGGVMTPLIKRNTTIPTKQTQTFTTYSDNQSSVLVQVYEGERAMTKDNNLLGKFDLTGIPPAPRGVPQIEVTFDIDANGILNV 491          
BLAST of FC931492 vs. ExPASy Swiss-Prot
Match: HSP72_HUMAN (Heat shock-related 70 kDa protein 2 OS=Homo sapiens GN=HSPA2 PE=1 SV=1)

HSP 1 Score: 174.481 bits (441), Expect = 4.824e-43
Identity = 96/225 (42.67%), Postives = 136/225 (60.44%), Query Frame = 3
Query:    6 ATQDAIHKLSSETSVQINVD-LGNGLKVSKNVTREEFEEVNQKVFEKCGSLITQCLHDAKVEIEDLNDVILVGGCSYIPKVRNLIQSTCKKVELYEGINPLEAAVSGAALEGAVTSGINDPFGNL-DLLTIQVTPLGIGIRANGNNFVPIIPRNTTMPARKDLVFTTVRDNQSEALIIVYEGEGEKVEENHLLGYFKITGIPPSPKGVPEINVCMDIDASSVLRV 674
            A + A   LSS T   I +D L  G+    ++TR  FEE+N  +F      + + L DAK++   + +++LVGG + IPK++ L+Q      EL + INP EA   GAA++ A+  G  D   N+ DLL + VTPL +GI   G    P+I RNTT+P ++   FTT  DNQS  L+ VYEGE    ++N+LLG F +TGIPP+P+GVP+I V  DIDA+ +L V
Sbjct:  269 ACERAKRTLSSSTQASIEIDSLYEGVDFYTSITRARFEELNADLFRGTLEPVEKALRDAKLDKGQIQEIVLVGGSTRIPKIQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAILIG--DKSENVQDLLLLDVTPLSLGIETAGGVMTPLIKRNTTIPTKQTQTFTTYSDNQSSVLVQVYEGERAMTKDNNLLGKFDLTGIPPAPRGVPQIEVTFDIDANGILNV 491          
BLAST of FC931492 vs. ExPASy Swiss-Prot
Match: HSP72_CAPHI (Heat shock-related 70 kDa protein 2 OS=Capra hircus GN=HSPA2 PE=3 SV=1)

HSP 1 Score: 174.481 bits (441), Expect = 4.824e-43
Identity = 96/225 (42.67%), Postives = 136/225 (60.44%), Query Frame = 3
Query:    6 ATQDAIHKLSSETSVQINVD-LGNGLKVSKNVTREEFEEVNQKVFEKCGSLITQCLHDAKVEIEDLNDVILVGGCSYIPKVRNLIQSTCKKVELYEGINPLEAAVSGAALEGAVTSGINDPFGNL-DLLTIQVTPLGIGIRANGNNFVPIIPRNTTMPARKDLVFTTVRDNQSEALIIVYEGEGEKVEENHLLGYFKITGIPPSPKGVPEINVCMDIDASSVLRV 674
            A + A   LSS T   I +D L  G+    ++TR  FEE+N  +F      + + L DAK++   + +++LVGG + IPK++ L+Q      EL + INP EA   GAA++ A+  G  D   N+ DLL + VTPL +GI   G    P+I RNTT+P ++   FTT  DNQS  L+ VYEGE    ++N+LLG F +TGIPP+P+GVP+I V  DIDA+ +L V
Sbjct:  269 ACERAKRTLSSSTQASIEIDSLYEGVDFYTSITRARFEELNADLFRVTLEPVEKALRDAKLDKGQIQEIVLVGGSTRIPKIQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAILIG--DKSENVQDLLLLDVTPLSLGIETAGGVMTPLIKRNTTIPTKQTQTFTTYSDNQSSVLVQVYEGERAMTKDNNLLGKFDLTGIPPAPRGVPQIEVTFDIDANGILNV 491          
BLAST of FC931492 vs. ExPASy Swiss-Prot
Match: HSP72_BOVIN (Heat shock-related 70 kDa protein 2 OS=Bos taurus GN=HSPA2 PE=2 SV=2)

HSP 1 Score: 174.481 bits (441), Expect = 4.824e-43
Identity = 96/225 (42.67%), Postives = 136/225 (60.44%), Query Frame = 3
Query:    6 ATQDAIHKLSSETSVQINVD-LGNGLKVSKNVTREEFEEVNQKVFEKCGSLITQCLHDAKVEIEDLNDVILVGGCSYIPKVRNLIQSTCKKVELYEGINPLEAAVSGAALEGAVTSGINDPFGNL-DLLTIQVTPLGIGIRANGNNFVPIIPRNTTMPARKDLVFTTVRDNQSEALIIVYEGEGEKVEENHLLGYFKITGIPPSPKGVPEINVCMDIDASSVLRV 674
            A + A   LSS T   I +D L  G+    ++TR  FEE+N  +F      + + L DAK++   + +++LVGG + IPK++ L+Q      EL + INP EA   GAA++ A+  G  D   N+ DLL + VTPL +GI   G    P+I RNTT+P ++   FTT  DNQS  L+ VYEGE    ++N+LLG F +TGIPP+P+GVP+I V  DIDA+ +L V
Sbjct:  269 ACERAKRTLSSSTQASIEIDSLYEGVDFYTSITRARFEELNADLFRGTLEPVEKALRDAKLDKGQIQEIVLVGGSTRIPKIQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAILIG--DKSENVQDLLLLDVTPLSLGIETAGGVMTPLIKRNTTIPTKQTQTFTTYSDNQSSVLVQVYEGERAMTKDNNLLGKFDLTGIPPAPRGVPQIEVTFDIDANGILNV 491          
BLAST of FC931492 vs. ExPASy Swiss-Prot
Match: HSP7C_DANRE (Heat shock cognate 71 kDa protein OS=Danio rerio GN=hspa8 PE=2 SV=1)

HSP 1 Score: 173.711 bits (439), Expect = 8.229e-43
Identity = 96/225 (42.67%), Postives = 137/225 (60.89%), Query Frame = 3
Query:    6 ATQDAIHKLSSETSVQINVD-LGNGLKVSKNVTREEFEEVNQKVFEKCGSLITQCLHDAKVEIEDLNDVILVGGCSYIPKVRNLIQSTCKKVELYEGINPLEAAVSGAALEGAVTSGINDPFGNL-DLLTIQVTPLGIGIRANGNNFVPIIPRNTTMPARKDLVFTTVRDNQSEALIIVYEGEGEKVEENHLLGYFKITGIPPSPKGVPEINVCMDIDASSVLRV 674
            A + A   LSS T   I +D L  G+    ++TR  FEE+N  +F      + + L DAK++   ++D++LVGG + IPK++ L+Q      EL + INP EA   GAA++ A+ SG  D   N+ DLL + VTPL +GI   G     +I RNTT+P ++   FTT  DNQ   LI VYEGE    ++N+LLG F++TGIPP+P+GVP+I V  DIDA+ ++ V
Sbjct:  266 ACERAKRTLSSSTQASIEIDSLYEGIDFYTSITRARFEELNADLFRGTLDPVEKALRDAKMDKAQIHDIVLVGGSTRIPKIQKLLQDYFNGKELNKSINPDEAVAYGAAVQAAILSG--DKSENVQDLLLLDVTPLSLGIETAGGVMTVLIKRNTTIPTKQTQTFTTYSDNQPGVLIQVYEGERAMTKDNNLLGKFELTGIPPAPRGVPQIEVTFDIDANGIMNV 488          
BLAST of FC931492 vs. ExPASy Swiss-Prot
Match: HSP7C_CHICK (Heat shock cognate 71 kDa protein OS=Gallus gallus GN=HSPA8 PE=1 SV=1)

HSP 1 Score: 173.326 bits (438), Expect = 1.075e-42
Identity = 96/225 (42.67%), Postives = 137/225 (60.89%), Query Frame = 3
Query:    6 ATQDAIHKLSSETSVQINVD-LGNGLKVSKNVTREEFEEVNQKVFEKCGSLITQCLHDAKVEIEDLNDVILVGGCSYIPKVRNLIQSTCKKVELYEGINPLEAAVSGAALEGAVTSGINDPFGNL-DLLTIQVTPLGIGIRANGNNFVPIIPRNTTMPARKDLVFTTVRDNQSEALIIVYEGEGEKVEENHLLGYFKITGIPPSPKGVPEINVCMDIDASSVLRV 674
            A + A   LSS T   I +D L  G+    ++TR  FE++N  +F      + + L DAK++   ++D++LVGG + IPK++ L+Q      EL + INP EA   GAA++ A+ SG  D   N+ DLL + VTPL +GI   G     +I RNTT+P ++   FTT  DNQ   LI VYEGE    ++N+LLG F++TGIPP+P+GVP+I V  DIDA+ +L V
Sbjct:  266 ACERAKRTLSSSTQASIEIDSLYEGIDFYTSITRARFEKLNADLFRGTLDPVEKALRDAKLDKSQIHDIVLVGGSTRIPKIQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAILSG--DKSENVQDLLLLDVTPLSLGIETAGGVMTVLIKRNTTIPTKQTQTFTTYSDNQPGVLIQVYEGERAMTKDNNLLGKFELTGIPPAPRGVPQIEVTFDIDANGILNV 488          
BLAST of FC931492 vs. ExPASy Swiss-Prot
Match: GRP78_PICAN (78 kDa glucose-regulated protein homolog OS=Pichia angusta GN=BiP PE=3 SV=1)

HSP 1 Score: 173.326 bits (438), Expect = 1.075e-42
Identity = 91/222 (40.99%), Postives = 144/222 (64.86%), Query Frame = 3
Query:   12 QDAIHKLSSETSVQINVD-LGNGLKVSKNVTREEFEEVNQKVFEKCGSLITQCLHDAKVEIEDLNDVILVGGCSYIPKVRNLIQSTCKKVELYEGINPLEAAVSGAALEGAVTSGINDPFGNLDLLTIQVTPLGIGIRANGNNFVPIIPRNTTMPARKDLVFTTVRDNQSEALIIVYEGEGEKVEENHLLGYFKITGIPPSPKGVPEINVCMDIDASSVLRV 674
            + A   LSS+ S +I +D   +G+  S++++R +FEE+N  +F+K    + Q L DAK++ ++++DV+ VGG + IPKV+ LI++     ++ +GINP EA   GAA++G V SG     G  D++ I V PL +GI  +G     +I RNT +P +K  +F+T  DNQ   LI VYEGE    ++N+LLG F++TGIPP+P+GVP+I V   +D++ +L+V
Sbjct:  303 EKAKRTLSSQMSTRIEIDSFVDGIDFSESLSRAKFEELNMDLFKKTLKPVQQVLDDAKMKPDEIDDVVFVGGSTRIPKVQELIENFFNGKKISKGINPDEAVAFGAAVQGGVLSGEE---GVEDIVLIDVNPLTLGIETSGGVMTTLIKRNTPIPTQKSQIFSTAADNQPVVLIQVYEGERAMAKDNNLLGKFELTGIPPAPRGVPQIEVTFTLDSNGILKV 521          
The following BLAST results are available for this feature:
BLAST of FC931492 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
HSP7C_BOVIN3.694e-4343.11Heat shock cognate 71 kDa protein OS=Bos taurus GN... [more]
GRP78_NEUCR3.694e-4341.8978 kDa glucose-regulated protein homolog OS=Neuros... [more]
HSP72_RAT4.824e-4342.67Heat shock-related 70 kDa protein 2 OS=Rattus norv... [more]
HSP72_MOUSE4.824e-4342.67Heat shock-related 70 kDa protein 2 OS=Mus musculu... [more]
HSP72_HUMAN4.824e-4342.67Heat shock-related 70 kDa protein 2 OS=Homo sapien... [more]
HSP72_CAPHI4.824e-4342.67Heat shock-related 70 kDa protein 2 OS=Capra hircu... [more]
HSP72_BOVIN4.824e-4342.67Heat shock-related 70 kDa protein 2 OS=Bos taurus ... [more]
HSP7C_DANRE8.229e-4342.67Heat shock cognate 71 kDa protein OS=Danio rerio G... [more]
HSP7C_CHICK1.075e-4242.67Heat shock cognate 71 kDa protein OS=Gallus gallus... [more]
GRP78_PICAN1.075e-4240.9978 kDa glucose-regulated protein homolog OS=Pichia... [more]

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Properties
Property NameValue
Genbank descriptionC34105F11EF PostHarvP1 Citrus clementina cDNA clone C34105F11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931492 ID=FC931492; Name=FC931492; organism=Citrus clementina; type=EST; length=697bp
GGGTTGCTACCCAGGATGCAATCCATAAACTATCATCAGAGACGAGTGTT
CAGATTAATGTCGACTTGGGAAATGGATTAAAAGTATCAAAAAATGTAAC
GCGAGAGGAGTTTGAGGAAGTAAACCAAAAGGTATTTGAGAAATGTGGGA
GCCTTATAACCCAGTGCTTGCATGATGCGAAGGTGGAGATAGAGGATCTG
AATGATGTAATACTCGTGGGTGGCTGCTCATATATTCCAAAAGTAAGGAA
TCTTATCCAGAGTACATGCAAAAAAGTAGAACTCTATGAGGGTATTAACC
CATTGGAAGCAGCAGTTAGTGGGGCAGCTCTGGAAGGAGCAGTGACTTCA
GGCATTAACGATCCATTTGGGAACCTGGACCTGTTAACCATCCAAGTCAC
ACCACTTGGCATTGGTATACGAGCTAATGGCAACAACTTTGTACCCATCA
TTCCTAGAAACACCACGATGCCAGCACGGAAAGATCTGGTCTTCACAACA
GTTCGCGACAACCAGTCTGAGGCGCTGATTATTGTTTATGAAGGTGAAGG
GGAGAAGGTAGAAGAGAATCATCTTCTAGGCTATTTCAAGATAACAGGAA
TTCCTCCCTCTCCCAAAGGAGTACCAGAAATAAATGTGTGCATGGACATT
GATGCCTCGAGTGTGCTGAGAGTTTTGGTTGGGGTCATTATGCCTGG
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