FC931492

Overview
NameFC931492
Unique NameFC931492
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length697
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC931492 vs. ExPASy Swiss-Prot
Match: DNAK_BORDL (Chaperone protein dnaK OS=Borrelia duttonii (strain Ly) GN=dnaK PE=2 SV=1)

HSP 1 Score: 139.428 bits (350), Expect = 1.720e-32
Identity = 81/228 (35.53%), Postives = 129/228 (56.58%), Query Frame = 3
Query:    6 ATQDAIHKLSSETSVQINVDL----GNGLK-VSKNVTREEFEEVNQKVFEKCGSLITQCLHDAKVEIEDLNDVILVGGCSYIPKVRNLIQSTCKKVELYEGINPLEAAVSGAALEGAVTSGINDPFGNLDLLTIQVTPLGIGIRANGNNFVPIIPRNTTMPARKDLVFTTVRDNQSEALIIVYEGEGEKVEENHLLGYFKITGIPPSPKGVPEINVCMDIDASSVLRV 674
            A + A  +LS      IN+       NG K +   +TR +FE++   + +K      + + DA ++  D+N+VILVGG + IP ++ +++    + E  +G+NP EA   GAA++G + +G        D++ + VTPL +GI   G     +I RNTT+P +K  VF+T  DNQ+   I V +GE E   +N +LG F + GIP +P+GVP+I V  DIDA+ ++ V
Sbjct:  260 AAEKAKIELSGAQEASINLPFITADANGPKHLQYTLTRAKFEQMVDHLVQKTKEPCLKAIKDAGLKASDINEVILVGGSTRIPAIQKIVKEIFGQ-EPNKGVNPDEAVAIGAAIQGGILTGEAK-----DMVLLDVTPLSLGIETLGGVMTKLIERNTTIPTKKSQVFSTAADNQTSVDIKVLQGEREMASQNRVLGNFILDGIPAAPRGVPQIEVSFDIDANGIVHV 481          
BLAST of FC931492 vs. ExPASy Swiss-Prot
Match: DNAK_BORBR (Chaperone protein dnaK OS=Bordetella bronchiseptica GN=dnaK PE=2 SV=1)

HSP 1 Score: 139.428 bits (350), Expect = 1.720e-32
Identity = 82/228 (35.96%), Postives = 129/228 (56.58%), Query Frame = 3
Query:    6 ATQDAIHKLSSETSVQINV-----DLGNGLKVSKNVTREEFEEVNQKVFEKCGSLITQCLHDAKVEIEDLNDVILVGGCSYIPKVRNLIQSTCKKVELYEGINPLEAAVSGAALEGAVTSGINDPFGNLDLLTIQVTPLGIGIRANGNNFVPIIPRNTTMPARKDLVFTTVRDNQSEALIIVYEGEGEKVEENHLLGYFKITGIPPSPKGVPEINVCMDIDASSVLRV 674
            A + A  +LSS    +IN+     D      ++  +TR + E + +++ E+        + DA V++ D++DVILVGG + +PKV++ ++    + E  + +NP EA  +GAA++G+V SG        D+L + VTPL +GI   G     +I +NTT+P R    F+T  DNQ    I V++GE E    N  LG F + GIPP+P+G+P+I V  DIDA+ +L V
Sbjct:  266 AAEKAKIELSSSQQTEINLPYITADASGPKHLNLKITRAKLEALVEELIERTIEPCRVAIKDAGVKVSDIDDVILVGGMTRMPKVQDKVKEFFGR-EPRKDVNPDEAVAAGAAIQGSVLSGERK-----DVLLLDVTPLSLGIETLGGVMTKMIQKNTTIPTRYSQTFSTADDNQPAVTIKVFQGEREIAAGNKGLGEFNLEGIPPAPRGLPQIEVTFDIDANGILHV 487          
BLAST of FC931492 vs. ExPASy Swiss-Prot
Match: DNAK_ARCB4 (Chaperone protein dnaK OS=Arcobacter butzleri (strain RM4018) GN=dnaK PE=2 SV=1)

HSP 1 Score: 139.428 bits (350), Expect = 1.720e-32
Identity = 81/228 (35.53%), Postives = 133/228 (58.33%), Query Frame = 3
Query:    6 ATQDAIHKLSSETSVQIN---VDLGNG--LKVSKNVTREEFEEVNQKVFEKCGSLITQCLHDAKVEIEDLNDVILVGGCSYIPKVRNLIQSTCKKVELYEGINPLEAAVSGAALEGAVTSGINDPFGNLDLLTIQVTPLGIGIRANGNNFVPIIPRNTTMPARKDLVFTTVRDNQSEALIIVYEGEGEKVEENHLLGYFKITGIPPSPKGVPEINVCMDIDASSVLRV 674
            A ++A  +LSS  S +IN   + +GN   + + K++TR +FE + +K+ ++    I   L +A +   D++++I+VGG + +PK   +++    K +L +G+NP E   +GAA++  V  G        D+L + VTPL +GI   G     +I + TT+P +K  VF+T  DNQ    I V +GE E  ++N  LG F+++ IP +P+GVP+I V  DIDA+ VL V
Sbjct:  259 AAENAKKELSSAESTEINLPFISMGNAGPIHLVKSLTRAKFESMTEKLIDETLDHIKIALKEAGLSKGDIDEIIMVGGSTRLPKANQVVKEFFGK-DLNKGVNPDEVVAAGAAVQAGVLRG-----DVKDVLLLDVTPLSLGIETLGGVMTKLIDKGTTIPVKKSQVFSTADDNQPAVSIHVCQGEREFAKDNKSLGMFELSDIPAAPRGVPQIEVTFDIDANGVLNV 480          
BLAST of FC931492 vs. ExPASy Swiss-Prot
Match: DNAK3_THEEB (Chaperone protein dnaK3 OS=Thermosynechococcus elongatus (strain BP-1) GN=dnaK3 PE=2 SV=1)

HSP 1 Score: 139.428 bits (350), Expect = 1.720e-32
Identity = 81/230 (35.22%), Postives = 133/230 (57.83%), Query Frame = 3
Query:   15 DAIHKLSSETS--VQINVDL------GNGLK-VSKNVTREEFEEVNQKVFEKCGSLITQCLHDAKVEIEDLNDVILVGGCSYIPKVRNLIQSTCKKVELYEGINPLEAAVSGAALEGAVTSGINDPFGNLDLLTIQVTPLGIGIRANGNNFVPIIPRNTTMPARKDLVFTTVRDNQSEALIIVYEGEGEKVEENHLLGYFKITGIPPSPKGVPEINVCMDIDASSVLRVL 677
            DA  K   E S  ++ N+DL        G K +   ++R +FE+++Q + ++    + Q L DA +    ++ V+LVGG + +P V++L++    + E  + +NP E    GAA++  + +G        D+L + VTPL +G+   G     +IPRNTT+P R+  +F+T  +NQS+  I V +GE E    N  LG FK+TGIPP+P+GVP+I V  D+DA+ +L+V+
Sbjct:  266 DAAEKAKIELSGLLETNIDLPFVTATAEGPKHIETTLSRRQFEDLSQGLLQRLRYPVEQALMDAHLTPSQIDAVVLVGGATRMPMVQDLVRQMIGR-EPKQNVNPDEVVAVGAAIQAGILAG-----DVKDILLLDVTPLSLGVETIGGVTKVLIPRNTTIPVRRSDIFSTSENNQSQVEIHVVQGERELAAHNKSLGRFKLTGIPPAPRGVPQIQVSFDLDANGLLQVV 489          
BLAST of FC931492 vs. ExPASy Swiss-Prot
Match: DNAK_XANP2 (Chaperone protein dnaK OS=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) GN=dnaK PE=2 SV=1)

HSP 1 Score: 139.043 bits (349), Expect = 2.246e-32
Identity = 79/228 (34.65%), Postives = 128/228 (56.14%), Query Frame = 3
Query:    6 ATQDAIHKLSSETSVQINV-----DLGNGLKVSKNVTREEFEEVNQKVFEKCGSLITQCLHDAKVEIEDLNDVILVGGCSYIPKVRNLIQSTCKKVELYEGINPLEAAVSGAALEGAVTSGINDPFGNLDLLTIQVTPLGIGIRANGNNFVPIIPRNTTMPARKDLVFTTVRDNQSEALIIVYEGEGEKVEENHLLGYFKITGIPPSPKGVPEINVCMDIDASSVLRV 674
            A + A  +LSS T  +IN+     D      ++  +TR +FE +   + ++        L DA +    +++V+LVGG + +PKV+ +++    K E ++G+NP E    GAA++  V  G        D+L + VTPL +GI   G  F  +I RNTT+P +K   F+T  D Q+   I V++GE E   +N +LG F + GIPP+P+GVP++ V  DIDA+ +++V
Sbjct:  260 AAEKAKIELSSATQTEINLPFITADATGPKHLTLKLTRAKFEALVDDLIQRTVEPCRLALKDAGLTAGQIDEVVLVGGMTRMPKVQEVVKQFFGK-EPHKGVNPDEVVAIGAAVQAGVLQG-----DVKDVLLLDVTPLSLGIETLGGVFTRLIDRNTTIPTKKSQTFSTAEDGQTAVTIRVFQGEREMAADNKMLGQFDLMGIPPAPRGVPQVEVTFDIDANGIVQV 481          
BLAST of FC931492 vs. ExPASy Swiss-Prot
Match: DNAK_WOLSU (Chaperone protein dnaK OS=Wolinella succinogenes GN=dnaK PE=2 SV=1)

HSP 1 Score: 139.043 bits (349), Expect = 2.246e-32
Identity = 83/228 (36.40%), Postives = 125/228 (54.82%), Query Frame = 3
Query:    6 ATQDAIHKLSSETSVQINV-----DLGNGLKVSKNVTREEFEEVNQKVFEKCGSLITQCLHDAKVEIEDLNDVILVGGCSYIPKVRNLIQSTCKKVELYEGINPLEAAVSGAALEGAVTSGINDPFGNLDLLTIQVTPLGIGIRANGNNFVPIIPRNTTMPARKDLVFTTVRDNQSEALIIVYEGEGEKVEENHLLGYFKITGIPPSPKGVPEINVCMDIDASSVLRV 674
            A ++A  +LSS    +IN+     D      + K ++R +FE +   + E+    I   + DA +   D+ +V++VGG + IPKV+  ++    K EL + +NP E    GAA++G V  G        D+L + VTPL +GI   G     II R TT+P +K  VF+T  DNQ    I V +GE E   +N  LG F+++GIP +P+GVP+I V  DIDA+ +L V
Sbjct:  259 AAENAKKELSSANETEINLPFITADATGPKHLVKKISRAKFESLIDDLIEQTIQKIDFVIKDAGLAKSDIAEVVMVGGSTRIPKVQQRVKDFIGK-ELNKSVNPDEVVALGAAIQGGVLKG-----DVKDVLLLDVTPLSLGIETLGGVMTKIIDRGTTIPVKKSQVFSTAEDNQPAVTIQVLQGERELARDNKSLGMFELSGIPAAPRGVPQIEVTFDIDANGILTV 480          
BLAST of FC931492 vs. ExPASy Swiss-Prot
Match: DNAK_STRTD (Chaperone protein dnaK OS=Streptococcus thermophilus (strain ATCC BAA-491 / LMD-9) GN=dnaK PE=2 SV=1)

HSP 1 Score: 139.043 bits (349), Expect = 2.246e-32
Identity = 82/228 (35.96%), Postives = 126/228 (55.26%), Query Frame = 3
Query:    6 ATQDAIHKLSSETSVQINVDL-----GNGLKVSKNVTREEFEEVNQKVFEKCGSLITQCLHDAKVEIEDLNDVILVGGCSYIPKVRNLIQSTCKKVELYEGINPLEAAVSGAALEGAVTSGINDPFGNLDLLTIQVTPLGIGIRANGNNFVPIIPRNTTMPARKDLVFTTVRDNQSEALIIVYEGEGEKVEENHLLGYFKITGIPPSPKGVPEINVCMDIDASSVLRV 674
            A + A   LS  TS QI++          L +   +TR +F+++ + + E+  + + Q L DA + + D+++VILVGG + IP V   +++   K E  + +NP E    GAA++G V SG        D++ + VTPL +GI   G  F  +I RNTT+P  K  VF+T  DNQ    I V +GE     +N  LG F++T IP +P+GVP+I V  DID + ++ V
Sbjct:  235 AAEKAKKDLSGVTSTQISLPFITAGEAGPLHLEMTLTRAKFDDLTRDLVERTKTPVRQALSDAGLSLSDIDEVILVGGSTRIPAVVEAVKAETGK-EPNKSVNPDEVVAMGAAIQGGVISG-----DVKDVVLLDVTPLSLGIETMGGVFTKLIERNTTIPTSKSQVFSTAADNQPAVDIHVLQGERPMAADNKTLGRFQLTDIPAAPRGVPQIEVTFDIDKNGIVSV 456          
BLAST of FC931492 vs. ExPASy Swiss-Prot
Match: DNAK_STRT2 (Chaperone protein dnaK OS=Streptococcus thermophilus (strain ATCC BAA-250 / LMG 18311) GN=dnaK PE=2 SV=1)

HSP 1 Score: 139.043 bits (349), Expect = 2.246e-32
Identity = 82/228 (35.96%), Postives = 126/228 (55.26%), Query Frame = 3
Query:    6 ATQDAIHKLSSETSVQINVDL-----GNGLKVSKNVTREEFEEVNQKVFEKCGSLITQCLHDAKVEIEDLNDVILVGGCSYIPKVRNLIQSTCKKVELYEGINPLEAAVSGAALEGAVTSGINDPFGNLDLLTIQVTPLGIGIRANGNNFVPIIPRNTTMPARKDLVFTTVRDNQSEALIIVYEGEGEKVEENHLLGYFKITGIPPSPKGVPEINVCMDIDASSVLRV 674
            A + A   LS  TS QI++          L +   +TR +F+++ + + E+  + + Q L DA + + D+++VILVGG + IP V   +++   K E  + +NP E    GAA++G V SG        D++ + VTPL +GI   G  F  +I RNTT+P  K  VF+T  DNQ    I V +GE     +N  LG F++T IP +P+GVP+I V  DID + ++ V
Sbjct:  235 AAEKAKKDLSGVTSTQISLPFITAGEAGPLHLEMTLTRAKFDDLTRDLVERTKTPVRQALSDAGLSLSDIDEVILVGGSTRIPAVVEAVKAETGK-EPNKSVNPDEVVAMGAAIQGGVISG-----DVKDVVLLDVTPLSLGIETMGGVFTKLIERNTTIPTSKSQVFSTAADNQPAVDIHVLQGERPMAADNKTLGRFQLTDIPAAPRGVPQIEVTFDIDKNGIVSV 456          
BLAST of FC931492 vs. ExPASy Swiss-Prot
Match: DNAK_STRT1 (Chaperone protein dnaK OS=Streptococcus thermophilus (strain CNRZ 1066) GN=dnaK PE=2 SV=1)

HSP 1 Score: 139.043 bits (349), Expect = 2.246e-32
Identity = 82/228 (35.96%), Postives = 126/228 (55.26%), Query Frame = 3
Query:    6 ATQDAIHKLSSETSVQINVDL-----GNGLKVSKNVTREEFEEVNQKVFEKCGSLITQCLHDAKVEIEDLNDVILVGGCSYIPKVRNLIQSTCKKVELYEGINPLEAAVSGAALEGAVTSGINDPFGNLDLLTIQVTPLGIGIRANGNNFVPIIPRNTTMPARKDLVFTTVRDNQSEALIIVYEGEGEKVEENHLLGYFKITGIPPSPKGVPEINVCMDIDASSVLRV 674
            A + A   LS  TS QI++          L +   +TR +F+++ + + E+  + + Q L DA + + D+++VILVGG + IP V   +++   K E  + +NP E    GAA++G V SG        D++ + VTPL +GI   G  F  +I RNTT+P  K  VF+T  DNQ    I V +GE     +N  LG F++T IP +P+GVP+I V  DID + ++ V
Sbjct:  235 AAEKAKKDLSGVTSTQISLPFITAGEAGPLHLEMTLTRAKFDDLTRDLVERTKTPVRQALSDAGLSLSDIDEVILVGGSTRIPAVVEAVKAETGK-EPNKSVNPDEVVAMGAAIQGGVISG-----DVKDVVLLDVTPLSLGIETMGGVFTKLIERNTTIPTSKSQVFSTAADNQPAVDIHVLQGERPMAADNKTLGRFQLTDIPAAPRGVPQIEVTFDIDKNGIVSV 456          
BLAST of FC931492 vs. ExPASy Swiss-Prot
Match: DNAK_PELPB (Chaperone protein dnaK OS=Pelodictyon phaeoclathratiforme (strain DSM 5477 / BU-1) GN=dnaK PE=2 SV=1)

HSP 1 Score: 139.043 bits (349), Expect = 2.246e-32
Identity = 81/228 (35.53%), Postives = 128/228 (56.14%), Query Frame = 3
Query:    6 ATQDAIHKLSSETSVQINVDLGNGLKVSK-----NVTREEFEEVNQKVFEKCGSLITQCLHDAKVEIEDLNDVILVGGCSYIPKVRNLIQSTCKKVELYEGINPLEAAVSGAALEGAVTSGINDPFGNLDLLTIQVTPLGIGIRANGNNFVPIIPRNTTMPARKDLVFTTVRDNQSEALIIVYEGEGEKVEENHLLGYFKITGIPPSPKGVPEINVCMDIDASSVLRV 674
            A + A  +LSS T  +IN+      +        N+TR +FE +   +F+K      + + ++K+E++++++V+LVGG + IPKV+ L++    K E  + +NP E    GAA++G V  G        D+L + VTPL +GI   G     +I  NTT+P RK  VF+T  DNQ+   + V +GE     +N  LG F +  IPPSP+G+P+I V  DID++ +L V
Sbjct:  258 AAEKAKIELSSRTDTEINLPFITATQEGPKHLVINLTRAKFEALCADLFDKILDPCRRAIKNSKLEMKEIDEVVLVGGSTRIPKVQALVKDFFGK-EPNKSVNPDEVVAIGAAIQGGVLKG-----DVTDVLLLDVTPLSLGIETLGGVMTKLIDANTTIPTRKQEVFSTAGDNQTSVEVHVLQGERPMATDNKTLGRFHLGDIPPSPRGIPQIEVTFDIDSNGILHV 479          
The following BLAST results are available for this feature:
BLAST of FC931492 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
DNAK_BORDL1.720e-3235.53Chaperone protein dnaK OS=Borrelia duttonii (strai... [more]
DNAK_BORBR1.720e-3235.96Chaperone protein dnaK OS=Bordetella bronchiseptic... [more]
DNAK_ARCB41.720e-3235.53Chaperone protein dnaK OS=Arcobacter butzleri (str... [more]
DNAK3_THEEB1.720e-3235.22Chaperone protein dnaK3 OS=Thermosynechococcus elo... [more]
DNAK_XANP22.246e-3234.65Chaperone protein dnaK OS=Xanthobacter autotrophic... [more]
DNAK_WOLSU2.246e-3236.40Chaperone protein dnaK OS=Wolinella succinogenes G... [more]
DNAK_STRTD2.246e-3235.96Chaperone protein dnaK OS=Streptococcus thermophil... [more]
DNAK_STRT22.246e-3235.96Chaperone protein dnaK OS=Streptococcus thermophil... [more]
DNAK_STRT12.246e-3235.96Chaperone protein dnaK OS=Streptococcus thermophil... [more]
DNAK_PELPB2.246e-3235.53Chaperone protein dnaK OS=Pelodictyon phaeoclathra... [more]

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Properties
Property NameValue
Genbank descriptionC34105F11EF PostHarvP1 Citrus clementina cDNA clone C34105F11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931492 ID=FC931492; Name=FC931492; organism=Citrus clementina; type=EST; length=697bp
GGGTTGCTACCCAGGATGCAATCCATAAACTATCATCAGAGACGAGTGTT
CAGATTAATGTCGACTTGGGAAATGGATTAAAAGTATCAAAAAATGTAAC
GCGAGAGGAGTTTGAGGAAGTAAACCAAAAGGTATTTGAGAAATGTGGGA
GCCTTATAACCCAGTGCTTGCATGATGCGAAGGTGGAGATAGAGGATCTG
AATGATGTAATACTCGTGGGTGGCTGCTCATATATTCCAAAAGTAAGGAA
TCTTATCCAGAGTACATGCAAAAAAGTAGAACTCTATGAGGGTATTAACC
CATTGGAAGCAGCAGTTAGTGGGGCAGCTCTGGAAGGAGCAGTGACTTCA
GGCATTAACGATCCATTTGGGAACCTGGACCTGTTAACCATCCAAGTCAC
ACCACTTGGCATTGGTATACGAGCTAATGGCAACAACTTTGTACCCATCA
TTCCTAGAAACACCACGATGCCAGCACGGAAAGATCTGGTCTTCACAACA
GTTCGCGACAACCAGTCTGAGGCGCTGATTATTGTTTATGAAGGTGAAGG
GGAGAAGGTAGAAGAGAATCATCTTCTAGGCTATTTCAAGATAACAGGAA
TTCCTCCCTCTCCCAAAGGAGTACCAGAAATAAATGTGTGCATGGACATT
GATGCCTCGAGTGTGCTGAGAGTTTTGGTTGGGGTCATTATGCCTGG
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