FC931492

Overview
NameFC931492
Unique NameFC931492
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length697
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC931492 vs. ExPASy Swiss-Prot
Match: DNAK_WOLPP (Chaperone protein dnaK OS=Wolbachia pipientis subsp. Culex pipiens (strain wPip) GN=dnaK PE=2 SV=1)

HSP 1 Score: 138.658 bits (348), Expect = 2.934e-32
Identity = 80/228 (35.09%), Postives = 124/228 (54.39%), Query Frame = 3
Query:    6 ATQDAIHKLSSETSVQIN-----VDLGNGLKVSKNVTREEFEEVNQKVFEKCGSLITQCLHDAKVEIEDLNDVILVGGCSYIPKVRNLIQSTCKKVELYEGINPLEAAVSGAALEGAVTSGINDPFGNLDLLTIQVTPLGIGIRANGNNFVPIIPRNTTMPARKDLVFTTVRDNQSEALIIVYEGEGEKVEENHLLGYFKITGIPPSPKGVPEINVCMDIDASSVLRV 674
            A + A  +LSS    ++N     VD      ++  +TR + E +   + E+      + L DA +    + +V+LVGG + +PKV   ++    K + + G+NP E    GAA++  +  G        D+L + VTPL +GI   G  F P+I RNTT+P +K  VF+T  DNQ+   I V++GE +   +N LLG F + GIPP+P+GVP+I V  DIDA+ +  V
Sbjct:  259 AAEKAKVELSSAMETEVNLPFVTVDASGPKHLNIKLTRAKLESLVNDLIERTIIPCKKALEDAGLSASQIGEVVLVGGMTRMPKVIEKVKEFFGK-DPHRGVNPDEVVAIGAAIQAGIIQG-----DVRDVLLLDVTPLSLGIETLGGVFTPLIERNTTIPTKKSQVFSTAEDNQTAVTIKVHQGERKLAIDNKLLGQFSLEGIPPAPRGVPQIEVTFDIDANGIAHV 480          
BLAST of FC931492 vs. ExPASy Swiss-Prot
Match: DNAK_RENSM (Chaperone protein dnaK OS=Renibacterium salmoninarum (strain ATCC 33209 / DSM 20767 / IFO 15589) GN=dnaK PE=2 SV=1)

HSP 1 Score: 138.658 bits (348), Expect = 2.934e-32
Identity = 75/228 (32.89%), Postives = 123/228 (53.95%), Query Frame = 3
Query:    6 ATQDAIHKLSSETSVQINVDL-----GNGLKVSKNVTREEFEEVNQKVFEKCGSLITQCLHDAKVEIEDLNDVILVGGCSYIPKVRNLIQSTCKKVELYEGINPLEAAVSGAALEGAVTSGINDPFGNLDLLTIQVTPLGIGIRANGNNFVPIIPRNTTMPARKDLVFTTVRDNQSEALIIVYEGEGEKVEENHLLGYFKITGIPPSPKGVPEINVCMDIDASSVLRV 674
            A + A  +LSS TS  I++          + + + +TR +F+E+   + E+        + +A +++ D++ ++LVGG + +P V  L++      +  +G+NP E    GAAL+  V  G        D+L I VTPL +GI   G     +I RNT +P ++   FTT  DNQ    I V++GE E   +N  LG F++TGI P+ +GVP++ V  DIDA+ ++ V
Sbjct:  241 AAEQAKKELSSATSTNISLQYLSVTPDGPVHLDEQLTRAKFQELTSDLLERTKKPFNDVIAEAGIKVSDIDHIVLVGGSTRMPAVTELVKQLAGGKDPNKGVNPDEVVAVGAALQAGVLKGERK-----DVLLIDVTPLSLGIETKGGVMTKLIERNTAIPTKRSETFTTADDNQPSVAIQVFQGEREFTRDNKPLGTFELTGIAPAQRGVPQVEVTFDIDANGIVHV 463          
BLAST of FC931492 vs. ExPASy Swiss-Prot
Match: DNAK_PROMT (Chaperone protein dnaK OS=Prochlorococcus marinus (strain NATL2A) GN=dnaK PE=2 SV=1)

HSP 1 Score: 138.658 bits (348), Expect = 2.934e-32
Identity = 79/228 (34.65%), Postives = 130/228 (57.02%), Query Frame = 3
Query:    6 ATQDAIHKLSSETSVQINVDL----GNGLK-VSKNVTREEFEEVNQKVFEKCGSLITQCLHDAKVEIEDLNDVILVGGCSYIPKVRNLIQSTCKKVELYEGINPLEAAVSGAALEGAVTSGINDPFGNLDLLTIQVTPLGIGIRANGNNFVPIIPRNTTMPARKDLVFTTVRDNQSEALIIVYEGEGEKVEENHLLGYFKITGIPPSPKGVPEINVCMDIDASSVLRV 674
            A + A  +LS+ T  +IN+        G K +   +TR +FEE+   + ++C   + Q L DAK+   +++++++VGG + +P V+ L++    K +  + +NP E    GAA++G V +G        D+L + VTPL +G+   G     +I RNTT+P +K   ++T  D Q+   I V +GE E   +N  LG F++ GIPP+P+GVP+I V  DIDA+ +L V
Sbjct:  259 AAEKAKIELSNATQSEINLPFITATPEGPKHLDLTLTRGKFEELASNLIDRCRVPVEQALKDAKLSTGEIDEIVMVGGSTRMPAVKELVKRVTTK-DPNQTVNPDEVVAVGAAIQGGVLAGEVK-----DILLLDVTPLSLGVETLGGVMTKMISRNTTVPTKKAETYSTAVDGQTNVEIHVLQGEREMASDNKSLGTFRLDGIPPAPRGVPQIEVTFDIDANGILSV 480          
BLAST of FC931492 vs. ExPASy Swiss-Prot
Match: DNAK_NEIM0 (Chaperone protein dnaK OS=Neisseria meningitidis serogroup C (strain 053442) GN=dnaK PE=2 SV=1)

HSP 1 Score: 138.658 bits (348), Expect = 2.934e-32
Identity = 84/228 (36.84%), Postives = 125/228 (54.82%), Query Frame = 3
Query:    6 ATQDAIHKLSSETSVQINV-----DLGNGLKVSKNVTREEFEEVNQKVFEKCGSLITQCLHDAKVEIEDLNDVILVGGCSYIPKVRNLIQSTCKKVELYEGINPLEAAVSGAALEGAVTSGINDPFGNLDLLTIQVTPLGIGIRANGNNFVPIIPRNTTMPARKDLVFTTVRDNQSEALIIVYEGEGEKVEENHLLGYFKITGIPPSPKGVPEINVCMDIDASSVLRV 674
            A + A  +LSS    +IN+     D      ++  +TR +FE + + +  +        L DA +   D++DVILVGG S +PKV+  +++   K E  + +NP EA   GAA++G V SG     G  D+L + VTPL +GI   G     +I +NTT+P +   VF+T  DNQS   I V +GE E+   N  LG F +  I P+P+G+P+I V  DIDA+ +L V
Sbjct:  266 AAEKAKIELSSGQQTEINLPYITMDATGPKHLAMKITRAKFESLVEDLIARSIEPCRTALKDAGLSTGDIDDVILVGGQSRMPKVQEAVKAFFGK-EPRKDVNPDEAVAVGAAIQGEVLSG-----GRSDVLLLDVTPLSLGIETMGGVMTKLIQKNTTIPTKASQVFSTAEDNQSAVTIHVLQGERERASANKSLGQFNLGDIAPAPRGMPQIEVTFDIDANGILHV 487          
BLAST of FC931492 vs. ExPASy Swiss-Prot
Match: DNAK_LYSSC (Chaperone protein dnaK OS=Lysinibacillus sphaericus (strain C3-41) GN=dnaK PE=2 SV=1)

HSP 1 Score: 138.658 bits (348), Expect = 2.934e-32
Identity = 81/228 (35.53%), Postives = 123/228 (53.95%), Query Frame = 3
Query:    6 ATQDAIHKLSSETSVQINVDL-----GNGLKVSKNVTREEFEEVNQKVFEKCGSLITQCLHDAKVEIEDLNDVILVGGCSYIPKVRNLIQSTCKKVELYEGINPLEAAVSGAALEGAVTSGINDPFGNLDLLTIQVTPLGIGIRANGNNFVPIIPRNTTMPARKDLVFTTVRDNQSEALIIVYEGEGEKVEENHLLGYFKITGIPPSPKGVPEINVCMDIDASSVLRV 674
            A + A   LS  TS QI++          L +  ++TR +F+E+   +  +    + Q L DA +   +++ VILVGG + IP V+  ++    K E + G+NP E    GAA++G V +G        D++ + VTPL +GI   G  F  +I RNTT+P  K  VF+T  DNQ    I V +GE     +N  LG F++  IPP+P+GVP+I V  DID + ++ V
Sbjct:  235 AAEKAKKDLSGVTSTQISLPFITAGEAGPLHLEISLTRAKFDEITLPLVNRTVGPVRQALSDAGLSTSEIDQVILVGGSTRIPAVQEAVRKETNK-EPHRGVNPDEVVAMGAAVQGGVLTG-----DVKDVVLLDVTPLSLGIETMGGVFTKLIDRNTTIPTSKSQVFSTAADNQPAVDIHVLQGERSMAADNKTLGRFQLADIPPAPRGVPQIEVTFDIDKNGIVSV 456          
BLAST of FC931492 vs. ExPASy Swiss-Prot
Match: DNAK_GRATL (Chaperone protein dnaK OS=Gracilaria tenuistipitata var. liui GN=dnaK PE=3 SV=1)

HSP 1 Score: 138.658 bits (348), Expect = 2.934e-32
Identity = 81/228 (35.53%), Postives = 128/228 (56.14%), Query Frame = 3
Query:    6 ATQDAIHKLSSETSVQINVDL----GNGLK-VSKNVTREEFEEVNQKVFEKCGSLITQCLHDAKVEIEDLNDVILVGGCSYIPKVRNLIQSTCKKVELYEGINPLEAAVSGAALEGAVTSGINDPFGNLDLLTIQVTPLGIGIRANGNNFVPIIPRNTTMPARKDLVFTTVRDNQSEALIIVYEGEGEKVEENHLLGYFKITGIPPSPKGVPEINVCMDIDASSVLRV 674
            A + A  +LSS     IN+        G K + KN+TR +FE + Q +  +C   +   L DA++   ++++++LVGG + IP ++ L++    K +  + +NP E    GAA++  V +G        D+L + VTPL +G+   G     II RNTT+P +K  +F+T  DNQ    I V +GE E  ++N  LG F++ GI P+P+GVP+I V  DIDA+ +L V
Sbjct:  260 AAEKAKMELSSLAQTDINLPFITSTDTGPKHLEKNITRAKFEYLCQDLINRCEIPVNNALKDAQLSSGNIDEIVLVGGSTRIPAIQQLVKKMIGK-DPNQSVNPDEVVAIGAAVQAGVLAGEVK-----DILLLDVTPLSLGVETLGGVMTKIIDRNTTVPTKKSEIFSTAVDNQPNVEIHVLQGEREFTKDNKSLGTFRLDGIMPAPRGVPQIEVIFDIDANGILSV 481          
BLAST of FC931492 vs. ExPASy Swiss-Prot
Match: DNAK_CHLCH (Chaperone protein dnaK OS=Chlorobium chlorochromatii (strain CaD3) GN=dnaK PE=2 SV=1)

HSP 1 Score: 138.658 bits (348), Expect = 2.934e-32
Identity = 78/228 (34.21%), Postives = 127/228 (55.70%), Query Frame = 3
Query:    6 ATQDAIHKLSSETSVQINVDLGNGLKVSK-----NVTREEFEEVNQKVFEKCGSLITQCLHDAKVEIEDLNDVILVGGCSYIPKVRNLIQSTCKKVELYEGINPLEAAVSGAALEGAVTSGINDPFGNLDLLTIQVTPLGIGIRANGNNFVPIIPRNTTMPARKDLVFTTVRDNQSEALIIVYEGEGEKVEENHLLGYFKITGIPPSPKGVPEINVCMDIDASSVLRV 674
            A + A  +LSS +  +IN+      +        N+TR +FE ++  +F K      + + +AK+E+ ++++V+LVGG + IPK++ L++    K E  + +NP E    GAA++G V  G        D+L + VTPL +GI   G     +I  NTT+P +K  VF+T  DNQ+   + V +GE     +N  LG F +  IPP+P+G+P++ V  DIDA+ +L V
Sbjct:  258 AAEKAKIELSSRSDTEINLPFITATQEGPKHLVINLTRAKFEAISADLFNKVLDPCRRAVKNAKIEMREIDEVVLVGGSTRIPKIQALVKEFFGK-EPNKSVNPDEVVAIGAAIQGGVLKG-----DVTDVLLLDVTPLSLGIETLGGVMTKLIEANTTIPTKKQEVFSTASDNQTSVEVHVLQGERPMAADNKTLGRFHLGDIPPAPRGIPQVEVIFDIDANGILHV 479          
BLAST of FC931492 vs. ExPASy Swiss-Prot
Match: DNAK_BACSH (Chaperone protein dnaK OS=Bacillus sphaericus GN=dnaK PE=2 SV=3)

HSP 1 Score: 138.658 bits (348), Expect = 2.934e-32
Identity = 81/228 (35.53%), Postives = 123/228 (53.95%), Query Frame = 3
Query:    6 ATQDAIHKLSSETSVQINVDL-----GNGLKVSKNVTREEFEEVNQKVFEKCGSLITQCLHDAKVEIEDLNDVILVGGCSYIPKVRNLIQSTCKKVELYEGINPLEAAVSGAALEGAVTSGINDPFGNLDLLTIQVTPLGIGIRANGNNFVPIIPRNTTMPARKDLVFTTVRDNQSEALIIVYEGEGEKVEENHLLGYFKITGIPPSPKGVPEINVCMDIDASSVLRV 674
            A + A   LS  TS QI++          L +  ++TR +F+E+   +  +    + Q L DA +   +++ VILVGG + IP V+  ++    K E + G+NP E    GAA++G V +G        D++ + VTPL +GI   G  F  +I RNTT+P  K  VF+T  DNQ    I V +GE     +N  LG F++  IPP+P+GVP+I V  DID + ++ V
Sbjct:  235 AAEKAKKDLSGVTSTQISLPFITAGEAGPLHLEISLTRAKFDEITLPLVNRTVGPVRQALSDAGLSTSEIDQVILVGGSTRIPAVQEAVRKETNK-EPHRGVNPDEVVAMGAAVQGGVLTG-----DVKDVVLLDVTPLSLGIETMGGVFTKLIDRNTTIPTSKSQVFSTAADNQPAVDIHVLQGERSMAADNKTLGRFQLADIPPAPRGVPQIEVTFDIDKNGIVSV 456          
BLAST of FC931492 vs. ExPASy Swiss-Prot
Match: DNAK_ALKMQ (Chaperone protein dnaK OS=Alkaliphilus metalliredigens (strain QYMF) GN=dnaK PE=2 SV=1)

HSP 1 Score: 138.658 bits (348), Expect = 2.934e-32
Identity = 81/228 (35.53%), Postives = 129/228 (56.58%), Query Frame = 3
Query:    6 ATQDAIHKLSSETSVQINVDL----GNGLK-VSKNVTREEFEEVNQKVFEKCGSLITQCLHDAKVEIEDLNDVILVGGCSYIPKVRNLIQSTCKKVELYEGINPLEAAVSGAALEGAVTSGINDPFGNLDLLTIQVTPLGIGIRANGNNFVPIIPRNTTMPARKDLVFTTVRDNQSEALIIVYEGEGEKVEENHLLGYFKITGIPPSPKGVPEINVCMDIDASSVLRV 674
            A++ A  +LSS  +  IN+        G K ++ ++TR +F+E+   + EK    +   L DA +   D+N +ILVGG + IP V+  ++    + + ++G+NP E    GAA++  V +G        D+L + VTPL +GI   G  F  +I RNTT+P++K   F+T  DNQ    I V +GE E    N  LG F+++GIPP+ +G+P+I V  DIDA+ ++ V
Sbjct:  237 ASEKAKQELSSTMTSSINLPFITATNEGPKHLNMDITRSKFDEITSHLVEKTMGPMRSALKDAGLSASDINKIILVGGSTRIPAVQQAVKKITNQ-DPHKGVNPDECVAVGAAIQAGVLTGEVK-----DVLLLDVTPLSLGIETLGGVFTRLIERNTTIPSKKSQTFSTAADNQPAVDIHVLQGEREMAAGNVSLGRFELSGIPPAHRGIPQIEVTFDIDANGIVNV 458          
BLAST of FC931492 vs. ExPASy Swiss-Prot
Match: HSP7Q_YEAST (Heat shock protein SSQ1, mitochondrial OS=Saccharomyces cerevisiae GN=SSQ1 PE=1 SV=1)

HSP 1 Score: 138.272 bits (347), Expect = 3.831e-32
Identity = 75/193 (38.86%), Postives = 114/193 (59.07%), Query Frame = 3
Query:   96 VTREEFEEVNQKVFEKCGSLITQCLHDAKVEIEDLNDVILVGGCSYIPKVRNLIQSTCKKVELYEGINPLEAAVSGAALEGAVTSGINDPFGNLDLLTIQVTPLGIGIRANGNNFVPIIPRNTTMPARKDLVFTTVRDNQSEALIIVYEGEGEKVEENHLLGYFKITGIPPSPKGVPEINVCMDIDASSVLRV 674
            +T EE + +   +  +    + Q L DA +E ED+++VILVGG + +PK+R++++    K      +NP E    GAA++G + SG        ++L + VTPL +GI   G  F P+IPRNTT+P +K  +F+T  D Q+   I V++GE   V  N L+G  K+TGI P PKG+P+I V  DIDA  ++ V
Sbjct:  336 MTEEELDNMTLSLINRTIPPVKQALKDADIEPEDIDEVILVGGMTRMPKIRSVVKDLFGKSP-NSSVNPDETVALGAAIQGGILSGEIK-----NVLLLDVTPLTLGIETFGGAFSPLIPRNTTVPVKKTEIFSTGVDGQAGVDIKVFQGERGLVRNNKLIGDLKLTGITPLPKGIPQIYVTFDIDADGIINV 522          
The following BLAST results are available for this feature:
BLAST of FC931492 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
DNAK_WOLPP2.934e-3235.09Chaperone protein dnaK OS=Wolbachia pipientis subs... [more]
DNAK_RENSM2.934e-3232.89Chaperone protein dnaK OS=Renibacterium salmoninar... [more]
DNAK_PROMT2.934e-3234.65Chaperone protein dnaK OS=Prochlorococcus marinus ... [more]
DNAK_NEIM02.934e-3236.84Chaperone protein dnaK OS=Neisseria meningitidis s... [more]
DNAK_LYSSC2.934e-3235.53Chaperone protein dnaK OS=Lysinibacillus sphaericu... [more]
DNAK_GRATL2.934e-3235.53Chaperone protein dnaK OS=Gracilaria tenuistipitat... [more]
DNAK_CHLCH2.934e-3234.21Chaperone protein dnaK OS=Chlorobium chlorochromat... [more]
DNAK_BACSH2.934e-3235.53Chaperone protein dnaK OS=Bacillus sphaericus GN=d... [more]
DNAK_ALKMQ2.934e-3235.53Chaperone protein dnaK OS=Alkaliphilus metalliredi... [more]
HSP7Q_YEAST3.831e-3238.86Heat shock protein SSQ1, mitochondrial OS=Saccharo... [more]

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Properties
Property NameValue
Genbank descriptionC34105F11EF PostHarvP1 Citrus clementina cDNA clone C34105F11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931492 ID=FC931492; Name=FC931492; organism=Citrus clementina; type=EST; length=697bp
GGGTTGCTACCCAGGATGCAATCCATAAACTATCATCAGAGACGAGTGTT
CAGATTAATGTCGACTTGGGAAATGGATTAAAAGTATCAAAAAATGTAAC
GCGAGAGGAGTTTGAGGAAGTAAACCAAAAGGTATTTGAGAAATGTGGGA
GCCTTATAACCCAGTGCTTGCATGATGCGAAGGTGGAGATAGAGGATCTG
AATGATGTAATACTCGTGGGTGGCTGCTCATATATTCCAAAAGTAAGGAA
TCTTATCCAGAGTACATGCAAAAAAGTAGAACTCTATGAGGGTATTAACC
CATTGGAAGCAGCAGTTAGTGGGGCAGCTCTGGAAGGAGCAGTGACTTCA
GGCATTAACGATCCATTTGGGAACCTGGACCTGTTAACCATCCAAGTCAC
ACCACTTGGCATTGGTATACGAGCTAATGGCAACAACTTTGTACCCATCA
TTCCTAGAAACACCACGATGCCAGCACGGAAAGATCTGGTCTTCACAACA
GTTCGCGACAACCAGTCTGAGGCGCTGATTATTGTTTATGAAGGTGAAGG
GGAGAAGGTAGAAGAGAATCATCTTCTAGGCTATTTCAAGATAACAGGAA
TTCCTCCCTCTCCCAAAGGAGTACCAGAAATAAATGTGTGCATGGACATT
GATGCCTCGAGTGTGCTGAGAGTTTTGGTTGGGGTCATTATGCCTGG
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