FC931492

Overview
NameFC931492
Unique NameFC931492
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length697
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC931492 vs. ExPASy Swiss-Prot
Match: HSP70_BRUMA (Heat shock 70 kDa protein OS=Brugia malayi GN=HSP70 PE=3 SV=1)

HSP 1 Score: 164.851 bits (416), Expect = 3.822e-40
Identity = 92/224 (41.07%), Postives = 130/224 (58.04%), Query Frame = 3
Query:    6 ATQDAIHKLSSETSVQINVD-LGNGLKVSKNVTREEFEEVNQKVFEKCGSLITQCLHDAKVEIEDLNDVILVGGCSYIPKVRNLIQSTCKKVELYEGINPLEAAVSGAALEGAVTSGINDPFGNLDLLTIQVTPLGIGIRANGNNFVPIIPRNTTMPARKDLVFTTVRDNQSEALIIVYEGEGEKVEENHLLGYFKITGIPPSPKGVPEINVCMDIDASSVLRV 674
            A + A   LSS +   I +D L  G+    N+TR  FEE+   +F      + + L DAK++   ++D++LVGG + IPKV+ L+       EL + INP EA   GAA++ A+ SG        DLL + V PL +GI   G     +I RNTT+P +    FTT  DNQ   LI VYEGE    ++N+LLG F+++GIPP+P+GVP+I V  DIDA+ +L V
Sbjct:  265 ACERAKRTLSSSSQASIEIDSLFEGIDFYTNITRARFEELCADLFRSTMDPVEKALRDAKMDKAQVHDIVLVGGSTRIPKVQKLLSDFFSGKELNKSINPDEAVAYGAAVQAAILSGDKSEAVQ-DLLLLDVAPLSLGIETAGGVMTALIKRNTTIPTKTSETFTTYSDNQPGVLIQVYEGERALTKDNNLLGKFELSGIPPAPRGVPQIEVTFDIDANGILNV 487          
BLAST of FC931492 vs. ExPASy Swiss-Prot
Match: HS7C1_DICDI (Heat shock cognate 70 kDa protein 1 OS=Dictyostelium discoideum GN=hspB PE=1 SV=2)

HSP 1 Score: 164.851 bits (416), Expect = 3.822e-40
Identity = 89/225 (39.56%), Postives = 136/225 (60.44%), Query Frame = 3
Query:    6 ATQDAIHKLSSETSVQINVD-LGNGLKVSKNVTREEFEEVNQKVFEKCGSLITQCLHDAKVEIEDLNDVILVGGCSYIPKVRNLIQSTCKKVELYEGINPLEAAVSGAALEGAVTSGINDPFGNL-DLLTIQVTPLGIGIRANGNNFVPIIPRNTTMPARKDLVFTTVRDNQSEALIIVYEGEGEKVEENHLLGYFKITGIPPSPKGVPEINVCMDIDASSVLRV 674
            A + A   LSS     I +D L  G+    ++TR  FEE+   +F  C   + + L D+K++ + +++++LVGG + IPKV+ L+Q      EL + INP EA   GAA++ A+ S  N+    + DLL + V PL +G+   G     +IPRNTT+P +K   F+T  DNQ   LI VYEGE    ++N+LLG F+++GIPP+P+GVP++ V  D+DA+ +L V
Sbjct:  264 ACERAKRTLSSSAQASIEIDSLFEGIDFYTSITRARFEELCADLFRGCLDPVEKVLKDSKLDKKSIHEIVLVGGSTRIPKVQQLLQEFFNGKELNKSINPDEAVAYGAAVQAAILS--NEGGAKVADLLLLDVAPLSMGLETAGGVMTTLIPRNTTIPCKKTQTFSTYSDNQPGVLIQVYEGERAMTKDNNLLGKFELSGIPPAPRGVPQVEVTFDVDANGILNV 486          
BLAST of FC931492 vs. ExPASy Swiss-Prot
Match: HSP7A_DROME (Heat shock 70 kDa protein cognate 1 OS=Drosophila melanogaster GN=Hsc70-1 PE=1 SV=1)

HSP 1 Score: 164.466 bits (415), Expect = 4.992e-40
Identity = 91/224 (40.62%), Postives = 131/224 (58.48%), Query Frame = 3
Query:    6 ATQDAIHKLSSETSVQINVD-LGNGLKVSKNVTREEFEEVNQKVFEKCGSLITQCLHDAKVEIEDLNDVILVGGCSYIPKVRNLIQSTCKKVELYEGINPLEAAVSGAALEGAVTSGINDPFGNLDLLTIQVTPLGIGIRANGNNFVPIIPRNTTMPARKDLVFTTVRDNQSEALIIVYEGEGEKVEENHLLGYFKITGIPPSPKGVPEINVCMDIDASSVLRV 674
            A + A   LSS T   I +D L  G+    +VTR  FEE+N  +F      + + L DAK++   ++D++LVGG + IPKV+ L+Q      EL + INP EA   GAA++ A+  G        DLL + VTPL +GI   G     +I RNTT+P ++  +FTT  DNQ   LI V+EGE     +N+ LG F+++ IPP+P+GVP++ V  DIDA+ +L V
Sbjct:  266 ACERAKRTLSSSTQASIEIDSLFEGVDFYTSVTRARFEELNGDLFRGTMEPVAKALRDAKMDKGQIHDIVLVGGSTRIPKVQRLLQDFFNGKELNKSINPDEAVAYGAAVQAAILHGDKSEAVQ-DLLLLDVTPLSLGIETAGGVMTTLIKRNTTIPTKQTQIFTTYADNQPGVLIQVFEGERAMTRDNNSLGKFELSAIPPAPRGVPQVEVTFDIDANGILNV 488          
BLAST of FC931492 vs. ExPASy Swiss-Prot
Match: HSP72_USTMA (Heat shock 70 kDa protein 2 OS=Ustilago maydis GN=UMS2 PE=3 SV=2)

HSP 1 Score: 164.466 bits (415), Expect = 4.992e-40
Identity = 89/224 (39.73%), Postives = 135/224 (60.27%), Query Frame = 3
Query:    6 ATQDAIHKLSSETSVQINVD-LGNGLKVSKNVTREEFEEVNQKVFEKCGSLITQCLHDAKVEIEDLNDVILVGGCSYIPKVRNLIQSTCKKVELYEGINPLEAAVSGAALEGAVTSGINDPFGNLDLLTIQVTPLGIGIRANGNNFVPIIPRNTTMPARKDLVFTTVRDNQSEALIIVYEGEGEKVEENHLLGYFKITGIPPSPKGVPEINVCMDIDASSVLRV 674
            A + A   LSS     I +D L  G+    ++TR  FEE+   +F      + + L D+K++   +++++LVGG + IPKV+ L+       EL + INP EA   GAA++ A+ SG        DLL + V PL +GI   G  F P+I RNTT+P +K  +F+T  DNQ   LI V+EGE  + ++N+LLG F+++GIPP+P+GVP+I V  D+DA+++L V
Sbjct:  264 ACERAKRTLSSAAQTTIEIDSLFEGIDFYTSITRARFEELCGDLFSHTIEPVEKVLRDSKIDKGSVHEIVLVGGSTRIPKVQKLLTDFFNGRELNKSINPDEAVAYGAAVQAAILSGDTSE-KTQDLLLLDVAPLSMGIETAGGVFTPLIKRNTTVPTKKSEIFSTYADNQPGVLIQVFEGERARTKDNNLLGKFELSGIPPAPRGVPQIEVTFDVDANAILNV 486          
BLAST of FC931492 vs. ExPASy Swiss-Prot
Match: HSP70_TRIRU (Heat shock 70 kDa protein OS=Trichophyton rubrum GN=HSP70 PE=2 SV=1)

HSP 1 Score: 164.466 bits (415), Expect = 4.992e-40
Identity = 84/224 (37.50%), Postives = 131/224 (58.48%), Query Frame = 3
Query:    6 ATQDAIHKLSSETSVQINVD-LGNGLKVSKNVTREEFEEVNQKVFEKCGSLITQCLHDAKVEIEDLNDVILVGGCSYIPKVRNLIQSTCKKVELYEGINPLEAAVSGAALEGAVTSGINDPFGNLDLLTIQVTPLGIGIRANGNNFVPIIPRNTTMPARKDLVFTTVRDNQSEALIIVYEGEGEKVEENHLLGYFKITGIPPSPKGVPEINVCMDIDASSVLRV 674
            A + A   LSS     I +D L  G+    ++TR  FEE+ Q +F      + + L DAK++   +++++LVGG + IPK++ ++       E  + INP E    GAA++ A+ SG        ++L + V PL +GI   G    P+I RNTT+P +K   F+T  DNQ   LI V+EGE  + ++N+LLG F++TGIPP+P+GVP+I V  D+DA+ ++ V
Sbjct:  264 ACERAKRTLSSAAQTSIEIDSLYEGVDFYTSITRARFEELCQDLFRSTMEPVERVLRDAKIDKSSVHEIVLVGGSTRIPKIQKMVSDFFNGKEPNKSINPDEGVAYGAAVQAAILSGDTSSKSTNEILLLDVAPLSLGIETAGGVMTPLIKRNTTIPTKKSETFSTFSDNQPGVLIQVFEGERARTKDNNLLGKFELTGIPPAPRGVPQIEVTFDVDANGIMNV 487          
BLAST of FC931492 vs. ExPASy Swiss-Prot
Match: HSP70_PENCI (Heat shock 70 kDa protein (Fragment) OS=Penicillium citrinum GN=HSP70 PE=1 SV=1)

HSP 1 Score: 164.466 bits (415), Expect = 4.992e-40
Identity = 86/224 (38.39%), Postives = 133/224 (59.38%), Query Frame = 3
Query:    6 ATQDAIHKLSSETSVQINVD-LGNGLKVSKNVTREEFEEVNQKVFEKCGSLITQCLHDAKVEIEDLNDVILVGGCSYIPKVRNLIQSTCKKVELYEGINPLEAAVSGAALEGAVTSGINDPFGNLDLLTIQVTPLGIGIRANGNNFVPIIPRNTTMPARKDLVFTTVRDNQSEALIIVYEGEGEKVEENHLLGYFKITGIPPSPKGVPEINVCMDIDASSVLRV 674
            A + A   LSS     I +D L  G+    ++TR  FEE+ Q +F      + + L DAK++   +++++LVGG + IPK++ L+     K +  + INP EA   GAA++ A+ SG        ++L + V PL +GI   G    P+I RNTT+P +K   F+T  DNQ   LI V+EGE  + ++N+LLG F++TGIPP+P+GVP+I V  D+DA+ ++ V
Sbjct:  134 ACERAKRTLSSAAQTSIEIDSLFEGIDFYTSITRARFEELCQDLFRGTMEPVERVLRDAKIDKSSVHEIVLVGGSTRIPKIQKLVSDFFNK-DANKSINPDEAVAYGAAVQAAILSGDTSSKSTNEILLLDVAPLSLGIETAGGVMTPLIKRNTTIPTKKSETFSTYSDNQPGVLIQVFEGERARTKDNNLLGKFELTGIPPAPRGVPQIEVTFDLDANGIMNV 356          
BLAST of FC931492 vs. ExPASy Swiss-Prot
Match: HS7C2_DICDI (Heat shock cognate 70 kDa protein 2 OS=Dictyostelium discoideum GN=hspE-1 PE=1 SV=1)

HSP 1 Score: 164.466 bits (415), Expect = 4.992e-40
Identity = 89/225 (39.56%), Postives = 136/225 (60.44%), Query Frame = 3
Query:    6 ATQDAIHKLSSETSVQINVD-LGNGLKVSKNVTREEFEEVNQKVFEKCGSLITQCLHDAKVEIEDLNDVILVGGCSYIPKVRNLIQSTCKKVELYEGINPLEAAVSGAALEGAVTSGINDPFGNL-DLLTIQVTPLGIGIRANGNNFVPIIPRNTTMPARKDLVFTTVRDNQSEALIIVYEGEGEKVEENHLLGYFKITGIPPSPKGVPEINVCMDIDASSVLRV 674
            A + A   LSS     I +D L  G+    ++TR  FEE+   +F  C   + + L D+K++ + +++++LVGG + IPKV+ L+Q      EL + INP EA   GAA++ A+ S  N+    + D+L + V PL +G+   G     +IPRNTT+P +K+  F+T  DNQ+  L+ VYEGE     +N+LLG F++T IPP+P+GVP+I V  DIDA+ +L V
Sbjct:  265 ACERAKRTLSSSAQASIEIDSLFEGIDFYTSITRARFEELCADLFRGCLDPVDKVLKDSKLDKKTIHEIVLVGGSTRIPKVQQLLQDHFNGKELNKSINPDEAVAYGAAVQAAILS--NEGGAKVADILLLDVAPLSMGLETAGGVMTTLIPRNTTIPCKKNQTFSTYSDNQTGVLVQVYEGERAMTRDNNLLGKFELTNIPPAPRGVPQIEVTFDIDANGILNV 487          
BLAST of FC931492 vs. ExPASy Swiss-Prot
Match: GRP78_YARLI (78 kDa glucose-regulated protein homolog OS=Yarrowia lipolytica GN=KAR2 PE=3 SV=1)

HSP 1 Score: 164.466 bits (415), Expect = 4.992e-40
Identity = 89/222 (40.09%), Postives = 140/222 (63.06%), Query Frame = 3
Query:   12 QDAIHKLSSETSVQINVD-LGNGLKVSKNVTREEFEEVNQKVFEKCGSLITQCLHDAKVEIEDLNDVILVGGCSYIPKVRNLIQSTCKKVELYEGINPLEAAVSGAALEGAVTSGINDPFGNLDLLTIQVTPLGIGIRANGNNFVPIIPRNTTMPARKDLVFTTVRDNQSEALIIVYEGEGEKVEENHLLGYFKITGIPPSPKGVPEINVCMDIDASSVLRV 674
            + A   LSS+ S +I ++   +G   S+ +TR +FEE+N  +F++    + Q L D+ V+ ED++D++LVGG + IPKV+ L++      +  +GINP EA   GAA++  V SG +   G  D++ + V PL +GI   G     +I RNT +P +K  +F+T  DNQS  LI V+EGE    ++N+LLG F++ GIPP+P+GVP+I V  ++DA+ +LRV
Sbjct:  300 EKAKRTLSSQMSTRIEIESFFDGEDFSETLTRAKFEELNIDLFKRTLKPVEQVLKDSGVKKEDVHDIVLVGGSTRIPKVQELLEKFFDGKKASKGINPDEAVAYGAAVQAGVLSGED---GVEDIVLLDVNPLTLGIETTGGVMTKLINRNTNIPTKKSQIFSTAVDNQSTVLIQVFEGERTMSKDNNLLGKFELKGIPPAPRGVPQIEVTFELDANGILRV 518          
BLAST of FC931492 vs. ExPASy Swiss-Prot
Match: GRP78_ASHGO (78 kDa glucose-regulated protein homolog OS=Ashbya gossypii GN=KAR2 PE=3 SV=1)

HSP 1 Score: 164.466 bits (415), Expect = 4.992e-40
Identity = 86/222 (38.74%), Postives = 141/222 (63.51%), Query Frame = 3
Query:   12 QDAIHKLSSETSVQINVD-LGNGLKVSKNVTREEFEEVNQKVFEKCGSLITQCLHDAKVEIEDLNDVILVGGCSYIPKVRNLIQSTCKKVELYEGINPLEAAVSGAALEGAVTSGINDPFGNLDLLTIQVTPLGIGIRANGNNFVPIIPRNTTMPARKDLVFTTVRDNQSEALIIVYEGEGEKVEENHLLGYFKITGIPPSPKGVPEINVCMDIDASSVLRV 674
            + A   LSS+ S ++ +D   +G+  S+ +TR +FEE+N  +F++    + + L DA ++ ED++D++LVGG + IPKV+ L+++   K +  +GINP EA   GAA++  V SG     G  D++ + V PL +GI   G    P+I RNT +P +K  +F+T  DNQ   +I VYEGE    ++N+ LG F+++GIPP+P+G+P+I V   +DA+ +L+V
Sbjct:  310 EKAKRALSSQMSTRVEIDSFVDGIDFSETLTRAKFEEMNLDLFKRTLKPVEKVLQDAGLKKEDIDDIVLVGGSTRIPKVQELLENFFNK-KASKGINPDEAVAYGAAVQAGVLSGEE---GVEDIVLLDVNPLTLGIEVTGGIMTPLIKRNTPIPTKKSQIFSTAVDNQKTVMIQVYEGERAMAKDNNHLGKFELSGIPPAPRGIPQIEVTFALDANGILKV 527          
BLAST of FC931492 vs. ExPASy Swiss-Prot
Match: DNAK_THESQ (Chaperone protein dnaK OS=Thermotoga sp. (strain RQ2) GN=dnaK PE=2 SV=1)

HSP 1 Score: 164.466 bits (415), Expect = 4.992e-40
Identity = 91/231 (39.39%), Postives = 132/231 (57.14%), Query Frame = 3
Query:   12 QDAIHKLSSETSVQINVDL----------GNGLKVSKNVTREEFEEVNQKVFEKCGSLITQCLHDAKVEIEDLNDVILVGGCSYIPKVRNLIQSTCKKVELYEGINPLEAAVSGAALEGAVTSGINDPFGNLDLLTIQVTPLGIGIRANGNNFVPIIPRNTTMPARKDLVFTTVRDNQSEALIIVYEGEGEKVEENHLLGYFKITGIPPSPKGVPEINVCMDIDASSVLRV 674
            +DA  K   E S ++  D+          G  L +   +TR  FE + + + E     I Q L+DAK+  +D++++ILVGG + +P V+  I+    K E  + +NP EA   GAA++ A+ +G     G  D++ + VTPL +GI   G  F PIIPRNT +P RK  +FTTV D Q+E  I VY+GE     EN  LG FK+ GIPP+P+GVP+I V  DID+  ++ V
Sbjct:  240 RDAAEKAKIELSTKMETDVSLPFIAVSPSGQPLHLEMRITRSLFESLTRDLVEMTRGPIEQALNDAKLSPQDIDEIILVGGMTRVPMVQRFIKEFFGK-EPNKSVNPDEAVAIGAAIQAAILAGTEGAKGR-DIVLVDVTPLTLGIEVKGGLFEPIIPRNTKIPVRKSKIFTTVEDGQTEVEIRVYQGERPIARENIFLGSFKLVGIPPAPRGVPQIEVTFDIDSDGIVHV 468          
The following BLAST results are available for this feature:
BLAST of FC931492 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
HSP70_BRUMA3.822e-4041.07Heat shock 70 kDa protein OS=Brugia malayi GN=HSP7... [more]
HS7C1_DICDI3.822e-4039.56Heat shock cognate 70 kDa protein 1 OS=Dictyosteli... [more]
HSP7A_DROME4.992e-4040.63Heat shock 70 kDa protein cognate 1 OS=Drosophila ... [more]
HSP72_USTMA4.992e-4039.73Heat shock 70 kDa protein 2 OS=Ustilago maydis GN=... [more]
HSP70_TRIRU4.992e-4037.50Heat shock 70 kDa protein OS=Trichophyton rubrum G... [more]
HSP70_PENCI4.992e-4038.39Heat shock 70 kDa protein (Fragment) OS=Penicilliu... [more]
HS7C2_DICDI4.992e-4039.56Heat shock cognate 70 kDa protein 2 OS=Dictyosteli... [more]
GRP78_YARLI4.992e-4040.0978 kDa glucose-regulated protein homolog OS=Yarrow... [more]
GRP78_ASHGO4.992e-4038.7478 kDa glucose-regulated protein homolog OS=Ashbya... [more]
DNAK_THESQ4.992e-4039.39Chaperone protein dnaK OS=Thermotoga sp. (strain R... [more]

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Properties
Property NameValue
Genbank descriptionC34105F11EF PostHarvP1 Citrus clementina cDNA clone C34105F11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931492 ID=FC931492; Name=FC931492; organism=Citrus clementina; type=EST; length=697bp
GGGTTGCTACCCAGGATGCAATCCATAAACTATCATCAGAGACGAGTGTT
CAGATTAATGTCGACTTGGGAAATGGATTAAAAGTATCAAAAAATGTAAC
GCGAGAGGAGTTTGAGGAAGTAAACCAAAAGGTATTTGAGAAATGTGGGA
GCCTTATAACCCAGTGCTTGCATGATGCGAAGGTGGAGATAGAGGATCTG
AATGATGTAATACTCGTGGGTGGCTGCTCATATATTCCAAAAGTAAGGAA
TCTTATCCAGAGTACATGCAAAAAAGTAGAACTCTATGAGGGTATTAACC
CATTGGAAGCAGCAGTTAGTGGGGCAGCTCTGGAAGGAGCAGTGACTTCA
GGCATTAACGATCCATTTGGGAACCTGGACCTGTTAACCATCCAAGTCAC
ACCACTTGGCATTGGTATACGAGCTAATGGCAACAACTTTGTACCCATCA
TTCCTAGAAACACCACGATGCCAGCACGGAAAGATCTGGTCTTCACAACA
GTTCGCGACAACCAGTCTGAGGCGCTGATTATTGTTTATGAAGGTGAAGG
GGAGAAGGTAGAAGAGAATCATCTTCTAGGCTATTTCAAGATAACAGGAA
TTCCTCCCTCTCCCAAAGGAGTACCAGAAATAAATGTGTGCATGGACATT
GATGCCTCGAGTGTGCTGAGAGTTTTGGTTGGGGTCATTATGCCTGG
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