FC931492

Overview
NameFC931492
Unique NameFC931492
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length697
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC931492 vs. ExPASy Swiss-Prot
Match: DNAK_THEP1 (Chaperone protein dnaK OS=Thermotoga petrophila (strain RKU-1 / ATCC BAA-488 / DSM 13995) GN=dnaK PE=2 SV=1)

HSP 1 Score: 164.466 bits (415), Expect = 4.992e-40
Identity = 91/231 (39.39%), Postives = 132/231 (57.14%), Query Frame = 3
Query:   12 QDAIHKLSSETSVQINVDL----------GNGLKVSKNVTREEFEEVNQKVFEKCGSLITQCLHDAKVEIEDLNDVILVGGCSYIPKVRNLIQSTCKKVELYEGINPLEAAVSGAALEGAVTSGINDPFGNLDLLTIQVTPLGIGIRANGNNFVPIIPRNTTMPARKDLVFTTVRDNQSEALIIVYEGEGEKVEENHLLGYFKITGIPPSPKGVPEINVCMDIDASSVLRV 674
            +DA  K   E S ++  D+          G  L +   +TR  FE + + + E     I Q L+DAK+  +D++++ILVGG + +P V+  I+    K E  + +NP EA   GAA++ A+ +G     G  D++ + VTPL +GI   G  F PIIPRNT +P RK  +FTTV D Q+E  I VY+GE     EN  LG FK+ GIPP+P+GVP+I V  DID+  ++ V
Sbjct:  240 RDAAEKAKIELSTKMETDVSLPFIAVSPSGQPLHLEMRITRSLFESLTRDLVEMTRGPIEQALNDAKLSPQDIDEIILVGGMTRVPMVQRFIKEFFGK-EPNKSVNPDEAVAIGAAIQAAILAGTEGAKGR-DIVLVDVTPLTLGIEVKGGLFEPIIPRNTKIPVRKSKIFTTVEDGQTEVEIRVYQGERPIARENIFLGSFKLVGIPPAPRGVPQIEVTFDIDSDGIVHV 468          
BLAST of FC931492 vs. ExPASy Swiss-Prot
Match: DNAK_THENN (Chaperone protein dnaK OS=Thermotoga neapolitana (strain ATCC 49049 / DSM 4359 / NS-E) GN=dnaK PE=2 SV=1)

HSP 1 Score: 164.466 bits (415), Expect = 4.992e-40
Identity = 91/231 (39.39%), Postives = 132/231 (57.14%), Query Frame = 3
Query:   12 QDAIHKLSSETSVQINVDL----------GNGLKVSKNVTREEFEEVNQKVFEKCGSLITQCLHDAKVEIEDLNDVILVGGCSYIPKVRNLIQSTCKKVELYEGINPLEAAVSGAALEGAVTSGINDPFGNLDLLTIQVTPLGIGIRANGNNFVPIIPRNTTMPARKDLVFTTVRDNQSEALIIVYEGEGEKVEENHLLGYFKITGIPPSPKGVPEINVCMDIDASSVLRV 674
            +DA  K   E S ++  D+          G  L +   +TR  FE + + + E     I Q L+DAK+  +D++++ILVGG + +P V+  I+    K E  + +NP EA   GAA++ A+ +G     G  D++ + VTPL +GI   G  F PIIPRNT +P RK  +FTTV D Q+E  I VY+GE     EN  LG FK+ GIPP+P+GVP+I V  DID+  ++ V
Sbjct:  240 RDAAEKAKIELSTKMETDVSLPFIAVSPSGQPLHLEMRITRSLFESLTRDLVEMTRGPIEQALNDAKLSPQDIDEIILVGGMTRVPMVQRFIKEFFGK-EPNKSVNPDEAVAIGAAIQAAILAGTEGAKGR-DIVLVDVTPLTLGIEVKGGLFEPIIPRNTKIPVRKSKIFTTVEDGQTEVEIRVYQGERPIARENIFLGSFKLVGIPPAPRGVPQIEVTFDIDSDGIVHV 468          
BLAST of FC931492 vs. ExPASy Swiss-Prot
Match: DNAK_THEMA (Chaperone protein dnaK OS=Thermotoga maritima GN=dnaK PE=2 SV=1)

HSP 1 Score: 164.466 bits (415), Expect = 4.992e-40
Identity = 91/231 (39.39%), Postives = 132/231 (57.14%), Query Frame = 3
Query:   12 QDAIHKLSSETSVQINVDL----------GNGLKVSKNVTREEFEEVNQKVFEKCGSLITQCLHDAKVEIEDLNDVILVGGCSYIPKVRNLIQSTCKKVELYEGINPLEAAVSGAALEGAVTSGINDPFGNLDLLTIQVTPLGIGIRANGNNFVPIIPRNTTMPARKDLVFTTVRDNQSEALIIVYEGEGEKVEENHLLGYFKITGIPPSPKGVPEINVCMDIDASSVLRV 674
            +DA  K   E S ++  D+          G  L +   +TR  FE + + + E     I Q L+DAK+  +D++++ILVGG + +P V+  I+    K E  + +NP EA   GAA++ A+ +G     G  D++ + VTPL +GI   G  F PIIPRNT +P RK  +FTTV D Q+E  I VY+GE     EN  LG FK+ GIPP+P+GVP+I V  DID+  ++ V
Sbjct:  240 RDAAEKAKIELSTKMETDVSLPFIAVSPSGQPLHLEMRITRSLFESLTRDLVEMTRGPIEQALNDAKLSPQDIDEIILVGGMTRVPMVQRFIKEFFGK-EPNKSVNPDEAVAIGAAIQAAILAGTEGAKGR-DIVLVDVTPLTLGIEVKGGLFEPIIPRNTKIPVRKSKIFTTVEDGQTEVEIRVYQGERPIARENIFLGSFKLVGIPPAPRGVPQIEVTFDIDSDGIVHV 468          
BLAST of FC931492 vs. ExPASy Swiss-Prot
Match: GRP78_SCHPO (78 kDa glucose-regulated protein homolog OS=Schizosaccharomyces pombe GN=bip1 PE=2 SV=2)

HSP 1 Score: 164.081 bits (414), Expect = 6.520e-40
Identity = 90/222 (40.54%), Postives = 140/222 (63.06%), Query Frame = 3
Query:   12 QDAIHKLSSETSVQINVD-LGNGLKVSKNVTREEFEEVNQKVFEKCGSLITQCLHDAKVEIEDLNDVILVGGCSYIPKVRNLIQSTCKKVELYEGINPLEAAVSGAALEGAVTSGINDPFGNLDLLTIQVTPLGIGIRANGNNFVPIIPRNTTMPARKDLVFTTVRDNQSEALIIVYEGEGEKVEENHLLGYFKITGIPPSPKGVPEINVCMDIDASSVLRV 674
            + A   LSS+ SV+I ++   NG   S+ ++R +FEE+N  +F+K    + Q L D+ ++  +++D++LVGG + IPKV+ L++S   K +  +GINP EA   GAA++  V SG     G+ +++ + V PL +GI   G     +I RNT +P RK  +F+T  DNQ+  LI VYEGE    ++N+LLG F + GIPP+P+GVP+I V  ++DA+ VL V
Sbjct:  298 EKAKRTLSSQKSVRIEIESFFNGQDFSETLSRAKFEEINMDLFKKTLKPVEQVLKDSNLKKSEIDDIVLVGGSTRIPKVQELLESFFGK-KASKGINPDEAVAYGAAVQAGVLSGEE---GSDNIVLLDVIPLTLGIETTGGVMTKLIGRNTPIPTRKSQIFSTAVDNQNTVLIQVYEGERTLTKDNNLLGKFDLRGIPPAPRGVPQIEVTFEVDANGVLTV 515          
BLAST of FC931492 vs. ExPASy Swiss-Prot
Match: HSP71_PICAN (Heat shock protein 70 1 OS=Pichia angusta GN=HSA1 PE=1 SV=2)

HSP 1 Score: 163.696 bits (413), Expect = 8.516e-40
Identity = 86/214 (40.19%), Postives = 132/214 (61.68%), Query Frame = 3
Query:   33 SSETSVQINVDLGNGLKVSKNVTREEFEEVNQKVFEKCGSLITQCLHDAKVEIEDLNDVILVGGCSYIPKVRNLIQSTCKKVELYEGINPLEAAVSGAALEGAVTSGINDPFGNLDLLTIQVTPLGIGIRANGNNFVPIIPRNTTMPARKDLVFTTVRDNQSEALIIVYEGEGEKVEENHLLGYFKITGIPPSPKGVPEINVCMDIDASSVLRV 674
            S++TSV+I+  L  G+    ++TR  FEE+ Q +F      + + + D K++   + +++LVGG + IPK++ L+       E  + INP EA   GAA++ A+ +G +      DLL + V PL +GI   G     +IPRNTT+P +K  +F+T  DNQ   LI VYEGE  K ++N+LLG F+++GIPP+P+GVP+I V  DIDA+ +L V
Sbjct:  277 SAQTSVEID-SLYEGIDFYTSITRARFEELCQDLFRSTLDPVEKVMRDGKLDKSQVAEIVLVGGSTRIPKIQKLVSDFFNGKEPNKSINPDEAVAYGAAVQAAILTG-DTSSKTQDLLLLDVAPLSLGIETAGGVMTKLIPRNTTIPTKKSEIFSTYSDNQPGVLIQVYEGERAKTKDNNLLGKFELSGIPPAPRGVPQIEVTFDIDANGILNV 488          
BLAST of FC931492 vs. ExPASy Swiss-Prot
Match: HSP71_PONAB (Heat shock 70 kDa protein 1 OS=Pongo abelii GN=HSPA1 PE=2 SV=1)

HSP 1 Score: 163.31 bits (412), Expect = 1.112e-39
Identity = 90/225 (40.00%), Postives = 135/225 (60.00%), Query Frame = 3
Query:    6 ATQDAIHKLSSETSVQINVD-LGNGLKVSKNVTREEFEEVNQKVFEKCGSLITQCLHDAKVEIEDLNDVILVGGCSYIPKVRNLIQSTCKKVELYEGINPLEAAVSGAALEGAVTSGINDPFGNL-DLLTIQVTPLGIGIRANGNNFVPIIPRNTTMPARKDLVFTTVRDNQSEALIIVYEGEGEKVEENHLLGYFKITGIPPSPKGVPEINVCMDIDASSVLRV 674
            A + A   LSS T   + +D L  G+    ++TR  FEE+   +F      + + L DAK++   ++D++LVGG + IPKV+ L+Q      +L + INP EA   GAA++ A+  G  D   N+ DLL + V PL +G+   G     +I RN+T+P ++  +FTT  DNQ   LI VYEGE    ++N+LLG F+++GIPP+P+GVP+I V  DIDA+ +L V
Sbjct:  266 ACERAKRTLSSSTQASLEIDSLFEGIDFYTSITRARFEELCSDLFRSTLEPVEKALRDAKLDKAQIHDLVLVGGSTRIPKVQKLLQDFFNGRDLNKSINPDEAVAYGAAVQAAILMG--DKSENVQDLLLLDVAPLSLGLETAGGVMTALIKRNSTIPTKQTQIFTTYSDNQPGVLIQVYEGERAMTKDNNLLGRFELSGIPPAPRGVPQIEVTFDIDANGILNV 488          
BLAST of FC931492 vs. ExPASy Swiss-Prot
Match: HSP71_HUMAN (Heat shock 70 kDa protein 1A/1B OS=Homo sapiens GN=HSPA1A PE=1 SV=5)

HSP 1 Score: 163.31 bits (412), Expect = 1.112e-39
Identity = 90/225 (40.00%), Postives = 135/225 (60.00%), Query Frame = 3
Query:    6 ATQDAIHKLSSETSVQINVD-LGNGLKVSKNVTREEFEEVNQKVFEKCGSLITQCLHDAKVEIEDLNDVILVGGCSYIPKVRNLIQSTCKKVELYEGINPLEAAVSGAALEGAVTSGINDPFGNL-DLLTIQVTPLGIGIRANGNNFVPIIPRNTTMPARKDLVFTTVRDNQSEALIIVYEGEGEKVEENHLLGYFKITGIPPSPKGVPEINVCMDIDASSVLRV 674
            A + A   LSS T   + +D L  G+    ++TR  FEE+   +F      + + L DAK++   ++D++LVGG + IPKV+ L+Q      +L + INP EA   GAA++ A+  G  D   N+ DLL + V PL +G+   G     +I RN+T+P ++  +FTT  DNQ   LI VYEGE    ++N+LLG F+++GIPP+P+GVP+I V  DIDA+ +L V
Sbjct:  266 ACERAKRTLSSSTQASLEIDSLFEGIDFYTSITRARFEELCSDLFRSTLEPVEKALRDAKLDKAQIHDLVLVGGSTRIPKVQKLLQDFFNGRDLNKSINPDEAVAYGAAVQAAILMG--DKSENVQDLLLLDVAPLSLGLETAGGVMTALIKRNSTIPTKQTQIFTTYSDNQPGVLIQVYEGERAMTKDNNLLGRFELSGIPPAPRGVPQIEVTFDIDANGILNV 488          
BLAST of FC931492 vs. ExPASy Swiss-Prot
Match: GRP78_RAT (78 kDa glucose-regulated protein OS=Rattus norvegicus GN=Hspa5 PE=1 SV=1)

HSP 1 Score: 163.31 bits (412), Expect = 1.112e-39
Identity = 87/222 (39.19%), Postives = 131/222 (59.01%), Query Frame = 3
Query:   12 QDAIHKLSSETSVQINVD-LGNGLKVSKNVTREEFEEVNQKVFEKCGSLITQCLHDAKVEIEDLNDVILVGGCSYIPKVRNLIQSTCKKVELYEGINPLEAAVSGAALEGAVTSGINDPFGNLDLLTIQVTPLGIGIRANGNNFVPIIPRNTTMPARKDLVFTTVRDNQSEALIIVYEGEGEKVEENHLLGYFKITGIPPSPKGVPEINVCMDIDASSVLRV 674
            + A   LSS+   +I ++    G   S+ +TR +FEE+N  +F      + + L D+ ++  D+++++LVGG + IPK++ L++      E   GINP EA   GAA++  V SG  D     DL+ + V PL +GI   G     +IPRNT +P +K  +F+T  DNQ    I VYEGE    ++NHLLG F +TGIPP+P+GVP+I V  +ID + +LRV
Sbjct:  293 EKAKRALSSQHQARIEIESFFEGEDFSETLTRAKFEELNMDLFRSTMKPVQKVLEDSDLKKSDIDEIVLVGGSTRIPKIQQLVKEFFNGKEPSRGINPDEAVAYGAAVQAGVLSGDQDTG---DLVLLDVCPLTLGIETVGGVMTKLIPRNTVVPTKKSQIFSTASDNQPTVTIKVYEGERPLTKDNHLLGTFDLTGIPPAPRGVPQIEVTFEIDVNGILRV 511          
BLAST of FC931492 vs. ExPASy Swiss-Prot
Match: GRP78_MOUSE (78 kDa glucose-regulated protein OS=Mus musculus GN=Hspa5 PE=1 SV=3)

HSP 1 Score: 163.31 bits (412), Expect = 1.112e-39
Identity = 87/222 (39.19%), Postives = 131/222 (59.01%), Query Frame = 3
Query:   12 QDAIHKLSSETSVQINVD-LGNGLKVSKNVTREEFEEVNQKVFEKCGSLITQCLHDAKVEIEDLNDVILVGGCSYIPKVRNLIQSTCKKVELYEGINPLEAAVSGAALEGAVTSGINDPFGNLDLLTIQVTPLGIGIRANGNNFVPIIPRNTTMPARKDLVFTTVRDNQSEALIIVYEGEGEKVEENHLLGYFKITGIPPSPKGVPEINVCMDIDASSVLRV 674
            + A   LSS+   +I ++    G   S+ +TR +FEE+N  +F      + + L D+ ++  D+++++LVGG + IPK++ L++      E   GINP EA   GAA++  V SG  D     DL+ + V PL +GI   G     +IPRNT +P +K  +F+T  DNQ    I VYEGE    ++NHLLG F +TGIPP+P+GVP+I V  +ID + +LRV
Sbjct:  294 EKAKRALSSQHQARIEIESFFEGEDFSETLTRAKFEELNMDLFRSTMKPVQKVLEDSDLKKSDIDEIVLVGGSTRIPKIQQLVKEFFNGKEPSRGINPDEAVAYGAAVQAGVLSGDQDTG---DLVLLDVCPLTLGIETVGGVMTKLIPRNTVVPTKKSQIFSTASDNQPTVTIKVYEGERPLTKDNHLLGTFDLTGIPPAPRGVPQIEVTFEIDVNGILRV 512          
BLAST of FC931492 vs. ExPASy Swiss-Prot
Match: GRP78_MESAU (78 kDa glucose-regulated protein OS=Mesocricetus auratus GN=HSPA5 PE=1 SV=1)

HSP 1 Score: 163.31 bits (412), Expect = 1.112e-39
Identity = 87/222 (39.19%), Postives = 131/222 (59.01%), Query Frame = 3
Query:   12 QDAIHKLSSETSVQINVD-LGNGLKVSKNVTREEFEEVNQKVFEKCGSLITQCLHDAKVEIEDLNDVILVGGCSYIPKVRNLIQSTCKKVELYEGINPLEAAVSGAALEGAVTSGINDPFGNLDLLTIQVTPLGIGIRANGNNFVPIIPRNTTMPARKDLVFTTVRDNQSEALIIVYEGEGEKVEENHLLGYFKITGIPPSPKGVPEINVCMDIDASSVLRV 674
            + A   LSS+   +I ++    G   S+ +TR +FEE+N  +F      + + L D+ ++  D+++++LVGG + IPK++ L++      E   GINP EA   GAA++  V SG  D     DL+ + V PL +GI   G     +IPRNT +P +K  +F+T  DNQ    I VYEGE    ++NHLLG F +TGIPP+P+GVP+I V  +ID + +LRV
Sbjct:  293 EKAKRALSSQHQARIEIESFFEGEDFSETLTRAKFEELNMDLFRSTMKPVQKVLEDSDLKKSDIDEIVLVGGSTRIPKIQQLVKEFFNGKEPSRGINPDEAVAYGAAVQAGVLSGDQDTG---DLVLLDVCPLTLGIETVGGVMTKLIPRNTVVPTKKSQIFSTASDNQPTVTIKVYEGERPLTKDNHLLGTFDLTGIPPAPRGVPQIEVTFEIDVNGILRV 511          
The following BLAST results are available for this feature:
BLAST of FC931492 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
DNAK_THEP14.992e-4039.39Chaperone protein dnaK OS=Thermotoga petrophila (s... [more]
DNAK_THENN4.992e-4039.39Chaperone protein dnaK OS=Thermotoga neapolitana (... [more]
DNAK_THEMA4.992e-4039.39Chaperone protein dnaK OS=Thermotoga maritima GN=d... [more]
GRP78_SCHPO6.520e-4040.5478 kDa glucose-regulated protein homolog OS=Schizo... [more]
HSP71_PICAN8.516e-4040.19Heat shock protein 70 1 OS=Pichia angusta GN=HSA1 ... [more]
HSP71_PONAB1.112e-3940.00Heat shock 70 kDa protein 1 OS=Pongo abelii GN=HSP... [more]
HSP71_HUMAN1.112e-3940.00Heat shock 70 kDa protein 1A/1B OS=Homo sapiens GN... [more]
GRP78_RAT1.112e-3939.1978 kDa glucose-regulated protein OS=Rattus norvegi... [more]
GRP78_MOUSE1.112e-3939.1978 kDa glucose-regulated protein OS=Mus musculus G... [more]
GRP78_MESAU1.112e-3939.1978 kDa glucose-regulated protein OS=Mesocricetus a... [more]

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Properties
Property NameValue
Genbank descriptionC34105F11EF PostHarvP1 Citrus clementina cDNA clone C34105F11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931492 ID=FC931492; Name=FC931492; organism=Citrus clementina; type=EST; length=697bp
GGGTTGCTACCCAGGATGCAATCCATAAACTATCATCAGAGACGAGTGTT
CAGATTAATGTCGACTTGGGAAATGGATTAAAAGTATCAAAAAATGTAAC
GCGAGAGGAGTTTGAGGAAGTAAACCAAAAGGTATTTGAGAAATGTGGGA
GCCTTATAACCCAGTGCTTGCATGATGCGAAGGTGGAGATAGAGGATCTG
AATGATGTAATACTCGTGGGTGGCTGCTCATATATTCCAAAAGTAAGGAA
TCTTATCCAGAGTACATGCAAAAAAGTAGAACTCTATGAGGGTATTAACC
CATTGGAAGCAGCAGTTAGTGGGGCAGCTCTGGAAGGAGCAGTGACTTCA
GGCATTAACGATCCATTTGGGAACCTGGACCTGTTAACCATCCAAGTCAC
ACCACTTGGCATTGGTATACGAGCTAATGGCAACAACTTTGTACCCATCA
TTCCTAGAAACACCACGATGCCAGCACGGAAAGATCTGGTCTTCACAACA
GTTCGCGACAACCAGTCTGAGGCGCTGATTATTGTTTATGAAGGTGAAGG
GGAGAAGGTAGAAGAGAATCATCTTCTAGGCTATTTCAAGATAACAGGAA
TTCCTCCCTCTCCCAAAGGAGTACCAGAAATAAATGTGTGCATGGACATT
GATGCCTCGAGTGTGCTGAGAGTTTTGGTTGGGGTCATTATGCCTGG
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