FC931492

Overview
NameFC931492
Unique NameFC931492
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length697
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC931492 vs. ExPASy Swiss-Prot
Match: GRP78_HUMAN (78 kDa glucose-regulated protein OS=Homo sapiens GN=HSPA5 PE=1 SV=2)

HSP 1 Score: 163.31 bits (412), Expect = 1.112e-39
Identity = 87/222 (39.19%), Postives = 131/222 (59.01%), Query Frame = 3
Query:   12 QDAIHKLSSETSVQINVD-LGNGLKVSKNVTREEFEEVNQKVFEKCGSLITQCLHDAKVEIEDLNDVILVGGCSYIPKVRNLIQSTCKKVELYEGINPLEAAVSGAALEGAVTSGINDPFGNLDLLTIQVTPLGIGIRANGNNFVPIIPRNTTMPARKDLVFTTVRDNQSEALIIVYEGEGEKVEENHLLGYFKITGIPPSPKGVPEINVCMDIDASSVLRV 674
            + A   LSS+   +I ++    G   S+ +TR +FEE+N  +F      + + L D+ ++  D+++++LVGG + IPK++ L++      E   GINP EA   GAA++  V SG  D     DL+ + V PL +GI   G     +IPRNT +P +K  +F+T  DNQ    I VYEGE    ++NHLLG F +TGIPP+P+GVP+I V  +ID + +LRV
Sbjct:  293 EKAKRALSSQHQARIEIESFYEGEDFSETLTRAKFEELNMDLFRSTMKPVQKVLEDSDLKKSDIDEIVLVGGSTRIPKIQQLVKEFFNGKEPSRGINPDEAVAYGAAVQAGVLSGDQDTG---DLVLLDVCPLTLGIETVGGVMTKLIPRNTVVPTKKSQIFSTASDNQPTVTIKVYEGERPLTKDNHLLGTFDLTGIPPAPRGVPQIEVTFEIDVNGILRV 511          
BLAST of FC931492 vs. ExPASy Swiss-Prot
Match: GRP78_CHICK (78 kDa glucose-regulated protein OS=Gallus gallus GN=HSPA5 PE=2 SV=1)

HSP 1 Score: 163.31 bits (412), Expect = 1.112e-39
Identity = 87/222 (39.19%), Postives = 131/222 (59.01%), Query Frame = 3
Query:   12 QDAIHKLSSETSVQINVD-LGNGLKVSKNVTREEFEEVNQKVFEKCGSLITQCLHDAKVEIEDLNDVILVGGCSYIPKVRNLIQSTCKKVELYEGINPLEAAVSGAALEGAVTSGINDPFGNLDLLTIQVTPLGIGIRANGNNFVPIIPRNTTMPARKDLVFTTVRDNQSEALIIVYEGEGEKVEENHLLGYFKITGIPPSPKGVPEINVCMDIDASSVLRV 674
            + A   LSS+   +I ++    G   S+ +TR +FEE+N  +F      + + L D+ ++  D+++++LVGG + IPK++ L++      E   GINP EA   GAA++  V SG  D     DL+ + V PL +GI   G     +IPRNT +P +K  +F+T  DNQ    I VYEGE    ++NHLLG F +TGIPP+P+GVP+I V  +ID + +LRV
Sbjct:  291 EKAKRALSSQHQARIEIESFFEGEDFSETLTRAKFEELNMDLFRSTMKPVQKVLEDSDLKKSDIDEIVLVGGSTRIPKIQQLVKEFFNGKEPSRGINPDEAVAYGAAVQAGVLSGDQDTG---DLVLLDVCPLTLGIETVGGVMTKLIPRNTVVPTKKSQIFSTASDNQPTVTIKVYEGERPLTKDNHLLGTFDLTGIPPAPRGVPQIEVTFEIDVNGILRV 509          
BLAST of FC931492 vs. ExPASy Swiss-Prot
Match: GRP78_BOVIN (78 kDa glucose-regulated protein OS=Bos taurus GN=HSPA5 PE=2 SV=1)

HSP 1 Score: 163.31 bits (412), Expect = 1.112e-39
Identity = 87/222 (39.19%), Postives = 131/222 (59.01%), Query Frame = 3
Query:   12 QDAIHKLSSETSVQINVD-LGNGLKVSKNVTREEFEEVNQKVFEKCGSLITQCLHDAKVEIEDLNDVILVGGCSYIPKVRNLIQSTCKKVELYEGINPLEAAVSGAALEGAVTSGINDPFGNLDLLTIQVTPLGIGIRANGNNFVPIIPRNTTMPARKDLVFTTVRDNQSEALIIVYEGEGEKVEENHLLGYFKITGIPPSPKGVPEINVCMDIDASSVLRV 674
            + A   LSS+   +I ++    G   S+ +TR +FEE+N  +F      + + L D+ ++  D+++++LVGG + IPK++ L++      E   GINP EA   GAA++  V SG  D     DL+ + V PL +GI   G     +IPRNT +P +K  +F+T  DNQ    I VYEGE    ++NHLLG F +TGIPP+P+GVP+I V  +ID + +LRV
Sbjct:  294 EKAKRALSSQHQARIEIESFYEGEDFSETLTRAKFEELNMDLFRSTMKPVQKVLEDSDLKKSDIDEIVLVGGSTRIPKIQQLVKEFFNGKEPSRGINPDEAVAYGAAVQAGVLSGDQDTG---DLVLLDVCPLTLGIETVGGVMTKLIPRNTVVPTKKSQIFSTASDNQPTVTIKVYEGERPLTKDNHLLGTFDLTGIPPAPRGVPQIEVTFEIDVNGILRV 512          
BLAST of FC931492 vs. ExPASy Swiss-Prot
Match: HSP75_SCHPO (Heat shock protein sks2 OS=Schizosaccharomyces pombe GN=sks2 PE=1 SV=2)

HSP 1 Score: 162.925 bits (411), Expect = 1.453e-39
Identity = 89/224 (39.73%), Postives = 127/224 (56.70%), Query Frame = 3
Query:    6 ATQDAIHKLSSETSVQINVD-LGNGLKVSKNVTREEFEEVNQKVFEKCGSLITQCLHDAKVEIEDLNDVILVGGCSYIPKVRNLIQSTCKKVELYEGINPLEAAVSGAALEGAVTSGINDPFGNLDLLTIQVTPLGIGIRANGNNFVPIIPRNTTMPARKDLVFTTVRDNQSEALIIVYEGEGEKVEENHLLGYFKITGIPPSPKGVPEINVCMDIDASSVLRV 674
            A + A   LSS T   + VD L NG+  S ++TR  FE++N   F+     + + L D+KV   D++D++LVGG + IPKV+ L+        L + INP EA   GAA++ AV +   D     DLL + V PL +G+   GN F  + PRNT +P  K   FTTV DNQ+     VY+GE     EN  LG F++TGIPP P+G  E+    ++DA+ +L+V
Sbjct:  268 ACERAKRALSSVTQTTVEVDSLSNGIDFSSSITRARFEDINATTFKATIDPVAKVLKDSKVPKADVHDIVLVGGSTRIPKVQRLVSDFFDGRALNKSINPDEAVAYGAAVQAAVLTNKADSDKTQDLLLLDVVPLSLGVAMEGNVFGVVCPRNTPIPTIKKRTFTTVADNQTTVTFPVYQGERVNCAENEPLGEFQLTGIPPMPRGQAELEATFELDANGILKV 491          
BLAST of FC931492 vs. ExPASy Swiss-Prot
Match: HSP71_CANFA (Heat shock 70 kDa protein 1 OS=Canis familiaris GN=HSPA1 PE=2 SV=1)

HSP 1 Score: 162.925 bits (411), Expect = 1.453e-39
Identity = 90/225 (40.00%), Postives = 134/225 (59.56%), Query Frame = 3
Query:    6 ATQDAIHKLSSETSVQINVD-LGNGLKVSKNVTREEFEEVNQKVFEKCGSLITQCLHDAKVEIEDLNDVILVGGCSYIPKVRNLIQSTCKKVELYEGINPLEAAVSGAALEGAVTSGINDPFGNL-DLLTIQVTPLGIGIRANGNNFVPIIPRNTTMPARKDLVFTTVRDNQSEALIIVYEGEGEKVEENHLLGYFKITGIPPSPKGVPEINVCMDIDASSVLRV 674
            A + A   LSS T   + +D L  G+    ++TR  FEE+   +F      + + L DAK++   ++D++LVGG + IPKV+ L+Q      +L + INP EA   GAA++ A+  G  D   N+ DLL + V PL +G+   G     +I RN+T+P ++  +FTT  DNQ   LI VYEGE     +N+LLG F+++GIPP+P+GVP+I V  DIDA+ +L V
Sbjct:  266 ACERAKRTLSSSTQASLEIDSLFEGIDFYTSITRARFEELCSDLFRSTLEPVEKALRDAKLDKAQIHDLVLVGGSTRIPKVQKLLQDFFNGRDLNKSINPDEAVAYGAAVQAAILMG--DKSENVQDLLLLDVAPLSLGLETAGGVMTALIKRNSTIPTKQTQIFTTYSDNQPGVLIQVYEGERAMTRDNNLLGRFELSGIPPAPRGVPQIEVTFDIDANGILNV 488          
BLAST of FC931492 vs. ExPASy Swiss-Prot
Match: HS71B_PIG (Heat shock 70 kDa protein 1B OS=Sus scrofa GN=HSPA1B PE=2 SV=1)

HSP 1 Score: 162.925 bits (411), Expect = 1.453e-39
Identity = 90/225 (40.00%), Postives = 134/225 (59.56%), Query Frame = 3
Query:    6 ATQDAIHKLSSETSVQINVD-LGNGLKVSKNVTREEFEEVNQKVFEKCGSLITQCLHDAKVEIEDLNDVILVGGCSYIPKVRNLIQSTCKKVELYEGINPLEAAVSGAALEGAVTSGINDPFGNL-DLLTIQVTPLGIGIRANGNNFVPIIPRNTTMPARKDLVFTTVRDNQSEALIIVYEGEGEKVEENHLLGYFKITGIPPSPKGVPEINVCMDIDASSVLRV 674
            A + A   LSS T   + +D L  G+    ++TR  FEE+   +F      + + L DAK++   ++D++LVGG + IPKV+ L+Q      +L + INP EA   GAA++ A+  G  D   N+ DLL + V PL +G+   G     +I RN+T+P ++  +FTT  DNQ   LI VYEGE     +N+LLG F+++GIPP+P+GVP+I V  DIDA+ +L V
Sbjct:  266 ACERAKRTLSSSTQASLEIDSLFEGIDFYTSITRARFEELCSDLFRSTLEPVEKALRDAKLDKAQIHDLVLVGGSTRIPKVQKLLQDFFNGRDLNKSINPDEAVAYGAAVQAAILMG--DKSENVQDLLLLDVAPLSLGLETAGGVMTALIKRNSTIPTKQTQIFTTYSDNQPGVLIQVYEGERAMTRDNNLLGRFELSGIPPAPRGVPQIEVTFDIDANGILNV 488          
BLAST of FC931492 vs. ExPASy Swiss-Prot
Match: HS71B_BOVIN (Heat shock 70 kDa protein 1B OS=Bos taurus GN=HSPA1B PE=2 SV=1)

HSP 1 Score: 162.925 bits (411), Expect = 1.453e-39
Identity = 90/225 (40.00%), Postives = 134/225 (59.56%), Query Frame = 3
Query:    6 ATQDAIHKLSSETSVQINVD-LGNGLKVSKNVTREEFEEVNQKVFEKCGSLITQCLHDAKVEIEDLNDVILVGGCSYIPKVRNLIQSTCKKVELYEGINPLEAAVSGAALEGAVTSGINDPFGNL-DLLTIQVTPLGIGIRANGNNFVPIIPRNTTMPARKDLVFTTVRDNQSEALIIVYEGEGEKVEENHLLGYFKITGIPPSPKGVPEINVCMDIDASSVLRV 674
            A + A   LSS T   + +D L  G+    ++TR  FEE+   +F      + + L DAK++   ++D++LVGG + IPKV+ L+Q      +L + INP EA   GAA++ A+  G  D   N+ DLL + V PL +G+   G     +I RN+T+P ++  +FTT  DNQ   LI VYEGE     +N+LLG F+++GIPP+P+GVP+I V  DIDA+ +L V
Sbjct:  266 ACERAKRTLSSSTQASLEIDSLFEGIDFYTSITRARFEELCSDLFRSTLEPVEKALRDAKLDKAQIHDLVLVGGSTRIPKVQKLLQDFFNGRDLNKSINPDEAVAYGAAVQAAILMG--DKSENVQDLLLLDVAPLSLGLETAGGVMTALIKRNSTIPTKQTQIFTTYSDNQPGVLIQVYEGERAMTRDNNLLGRFELSGIPPAPRGVPQIEVTFDIDANGILNV 488          
BLAST of FC931492 vs. ExPASy Swiss-Prot
Match: HS71B_BOSMU (Heat shock 70 kDa protein 1B OS=Bos mutus grunniens GN=HSPA1B PE=2 SV=1)

HSP 1 Score: 162.925 bits (411), Expect = 1.453e-39
Identity = 90/225 (40.00%), Postives = 134/225 (59.56%), Query Frame = 3
Query:    6 ATQDAIHKLSSETSVQINVD-LGNGLKVSKNVTREEFEEVNQKVFEKCGSLITQCLHDAKVEIEDLNDVILVGGCSYIPKVRNLIQSTCKKVELYEGINPLEAAVSGAALEGAVTSGINDPFGNL-DLLTIQVTPLGIGIRANGNNFVPIIPRNTTMPARKDLVFTTVRDNQSEALIIVYEGEGEKVEENHLLGYFKITGIPPSPKGVPEINVCMDIDASSVLRV 674
            A + A   LSS T   + +D L  G+    ++TR  FEE+   +F      + + L DAK++   ++D++LVGG + IPKV+ L+Q      +L + INP EA   GAA++ A+  G  D   N+ DLL + V PL +G+   G     +I RN+T+P ++  +FTT  DNQ   LI VYEGE     +N+LLG F+++GIPP+P+GVP+I V  DIDA+ +L V
Sbjct:  266 ACERAKRTLSSSTQASLEIDSLFEGIDFYTSITRARFEELCSDLFRSTLEPVEKALRDAKLDKAQIHDLVLVGGSTRIPKVQKLLQDFFNGRDLNKSINPDEAVAYGAAVQAAILMG--DKSENVQDLLLLDVAPLSLGLETAGGVMTALIKRNSTIPTKQTQIFTTYSDNQPGVLIQVYEGERAMTRDNNLLGRFELSGIPPAPRGVPQIEVTFDIDANGILNV 488          
BLAST of FC931492 vs. ExPASy Swiss-Prot
Match: HS71A_PIG (Heat shock 70 kDa protein 1A OS=Sus scrofa GN=HSPA1A PE=3 SV=1)

HSP 1 Score: 162.925 bits (411), Expect = 1.453e-39
Identity = 90/225 (40.00%), Postives = 134/225 (59.56%), Query Frame = 3
Query:    6 ATQDAIHKLSSETSVQINVD-LGNGLKVSKNVTREEFEEVNQKVFEKCGSLITQCLHDAKVEIEDLNDVILVGGCSYIPKVRNLIQSTCKKVELYEGINPLEAAVSGAALEGAVTSGINDPFGNL-DLLTIQVTPLGIGIRANGNNFVPIIPRNTTMPARKDLVFTTVRDNQSEALIIVYEGEGEKVEENHLLGYFKITGIPPSPKGVPEINVCMDIDASSVLRV 674
            A + A   LSS T   + +D L  G+    ++TR  FEE+   +F      + + L DAK++   ++D++LVGG + IPKV+ L+Q      +L + INP EA   GAA++ A+  G  D   N+ DLL + V PL +G+   G     +I RN+T+P ++  +FTT  DNQ   LI VYEGE     +N+LLG F+++GIPP+P+GVP+I V  DIDA+ +L V
Sbjct:  266 ACERAKRTLSSSTQASLEIDSLFEGIDFYTSITRARFEELCSDLFRSTLEPVEKALRDAKLDKAQIHDLVLVGGSTRIPKVQKLLQDFFNGRDLNKSINPDEAVAYGAAVQAAILMG--DKSENVQDLLLLDVAPLSLGLETAGGVMTALIKRNSTIPTKQTQIFTTYSDNQPGVLIQVYEGERAMTRDNNLLGRFELSGIPPAPRGVPQIEVTFDIDANGILNV 488          
BLAST of FC931492 vs. ExPASy Swiss-Prot
Match: HS71A_BOVIN (Heat shock 70 kDa protein 1A OS=Bos taurus GN=HSPA1A PE=2 SV=2)

HSP 1 Score: 162.925 bits (411), Expect = 1.453e-39
Identity = 90/225 (40.00%), Postives = 134/225 (59.56%), Query Frame = 3
Query:    6 ATQDAIHKLSSETSVQINVD-LGNGLKVSKNVTREEFEEVNQKVFEKCGSLITQCLHDAKVEIEDLNDVILVGGCSYIPKVRNLIQSTCKKVELYEGINPLEAAVSGAALEGAVTSGINDPFGNL-DLLTIQVTPLGIGIRANGNNFVPIIPRNTTMPARKDLVFTTVRDNQSEALIIVYEGEGEKVEENHLLGYFKITGIPPSPKGVPEINVCMDIDASSVLRV 674
            A + A   LSS T   + +D L  G+    ++TR  FEE+   +F      + + L DAK++   ++D++LVGG + IPKV+ L+Q      +L + INP EA   GAA++ A+  G  D   N+ DLL + V PL +G+   G     +I RN+T+P ++  +FTT  DNQ   LI VYEGE     +N+LLG F+++GIPP+P+GVP+I V  DIDA+ +L V
Sbjct:  266 ACERAKRTLSSSTQASLEIDSLFEGIDFYTSITRARFEELCSDLFRSTLEPVEKALRDAKLDKAQIHDLVLVGGSTRIPKVQKLLQDFFNGRDLNKSINPDEAVAYGAAVQAAILMG--DKSENVQDLLLLDVAPLSLGLETAGGVMTALIKRNSTIPTKQTQIFTTYSDNQPGVLIQVYEGERAMTRDNNLLGRFELSGIPPAPRGVPQIEVTFDIDANGILNV 488          
The following BLAST results are available for this feature:
BLAST of FC931492 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
GRP78_HUMAN1.112e-3939.1978 kDa glucose-regulated protein OS=Homo sapiens G... [more]
GRP78_CHICK1.112e-3939.1978 kDa glucose-regulated protein OS=Gallus gallus ... [more]
GRP78_BOVIN1.112e-3939.1978 kDa glucose-regulated protein OS=Bos taurus GN=... [more]
HSP75_SCHPO1.453e-3939.73Heat shock protein sks2 OS=Schizosaccharomyces pom... [more]
HSP71_CANFA1.453e-3940.00Heat shock 70 kDa protein 1 OS=Canis familiaris GN... [more]
HS71B_PIG1.453e-3940.00Heat shock 70 kDa protein 1B OS=Sus scrofa GN=HSPA... [more]
HS71B_BOVIN1.453e-3940.00Heat shock 70 kDa protein 1B OS=Bos taurus GN=HSPA... [more]
HS71B_BOSMU1.453e-3940.00Heat shock 70 kDa protein 1B OS=Bos mutus grunnien... [more]
HS71A_PIG1.453e-3940.00Heat shock 70 kDa protein 1A OS=Sus scrofa GN=HSPA... [more]
HS71A_BOVIN1.453e-3940.00Heat shock 70 kDa protein 1A OS=Bos taurus GN=HSPA... [more]

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Properties
Property NameValue
Genbank descriptionC34105F11EF PostHarvP1 Citrus clementina cDNA clone C34105F11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931492 ID=FC931492; Name=FC931492; organism=Citrus clementina; type=EST; length=697bp
GGGTTGCTACCCAGGATGCAATCCATAAACTATCATCAGAGACGAGTGTT
CAGATTAATGTCGACTTGGGAAATGGATTAAAAGTATCAAAAAATGTAAC
GCGAGAGGAGTTTGAGGAAGTAAACCAAAAGGTATTTGAGAAATGTGGGA
GCCTTATAACCCAGTGCTTGCATGATGCGAAGGTGGAGATAGAGGATCTG
AATGATGTAATACTCGTGGGTGGCTGCTCATATATTCCAAAAGTAAGGAA
TCTTATCCAGAGTACATGCAAAAAAGTAGAACTCTATGAGGGTATTAACC
CATTGGAAGCAGCAGTTAGTGGGGCAGCTCTGGAAGGAGCAGTGACTTCA
GGCATTAACGATCCATTTGGGAACCTGGACCTGTTAACCATCCAAGTCAC
ACCACTTGGCATTGGTATACGAGCTAATGGCAACAACTTTGTACCCATCA
TTCCTAGAAACACCACGATGCCAGCACGGAAAGATCTGGTCTTCACAACA
GTTCGCGACAACCAGTCTGAGGCGCTGATTATTGTTTATGAAGGTGAAGG
GGAGAAGGTAGAAGAGAATCATCTTCTAGGCTATTTCAAGATAACAGGAA
TTCCTCCCTCTCCCAAAGGAGTACCAGAAATAAATGTGTGCATGGACATT
GATGCCTCGAGTGTGCTGAGAGTTTTGGTTGGGGTCATTATGCCTGG
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