FC931492

Overview
NameFC931492
Unique NameFC931492
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length697
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC931492 vs. ExPASy Swiss-Prot
Match: GRP78_PONAB (78 kDa glucose-regulated protein OS=Pongo abelii GN=HSPA5 PE=2 SV=1)

HSP 1 Score: 162.54 bits (410), Expect = 1.897e-39
Identity = 87/222 (39.19%), Postives = 130/222 (58.56%), Query Frame = 3
Query:   12 QDAIHKLSSETSVQINVD-LGNGLKVSKNVTREEFEEVNQKVFEKCGSLITQCLHDAKVEIEDLNDVILVGGCSYIPKVRNLIQSTCKKVELYEGINPLEAAVSGAALEGAVTSGINDPFGNLDLLTIQVTPLGIGIRANGNNFVPIIPRNTTMPARKDLVFTTVRDNQSEALIIVYEGEGEKVEENHLLGYFKITGIPPSPKGVPEINVCMDIDASSVLRV 674
            + A   LSS+   +I ++    G   S+ +TR +FEE+N  +F      + + L D+ ++  D+++++LVGG + IPK++ L++      E   GINP EA   GAA++  V SG  D     DL  + V PL +GI   G     +IPRNT +P +K  +F+T  DNQ    I VYEGE    ++NHLLG F +TGIPP+P+GVP+I V  +ID + +LRV
Sbjct:  293 EKAKRALSSQHQARIEIESFYEGEDFSETLTRAKFEELNMDLFRSTMKPVQKVLEDSDLKKSDIDEIVLVGGSTRIPKIQQLVKEFFNGKEPSRGINPDEAVAYGAAVQAGVLSGDQDTG---DLALLDVCPLTLGIETVGGVMTKLIPRNTVVPTKKSQIFSTASDNQPTVTIKVYEGERPLTKDNHLLGTFDLTGIPPAPRGVPQIEVTFEIDVNGILRV 511          
BLAST of FC931492 vs. ExPASy Swiss-Prot
Match: HSP71_PARBA (Heat shock 70 kDa protein 1 OS=Paracoccidioides brasiliensis (strain ATCC MYA-826 / Pb01) GN=HSP70-1 PE=1 SV=1)

HSP 1 Score: 162.155 bits (409), Expect = 2.478e-39
Identity = 86/224 (38.39%), Postives = 132/224 (58.93%), Query Frame = 3
Query:    6 ATQDAIHKLSSETSVQINVD-LGNGLKVSKNVTREEFEEVNQKVFEKCGSLITQCLHDAKVEIEDLNDVILVGGCSYIPKVRNLIQSTCKKVELYEGINPLEAAVSGAALEGAVTSGINDPFGNLDLLTIQVTPLGIGIRANGNNFVPIIPRNTTMPARKDLVFTTVRDNQSEALIIVYEGEGEKVEENHLLGYFKITGIPPSPKGVPEINVCMDIDASSVLRV 674
            A + A   LSS     I +D L  G+    ++TR  FEE+ Q +F      + + L DAK++   +++++LVGG + IP+++ L+       E  + INP EA   GAA++ A+ SG +      ++L + V PL +GI   G    P+I RNTT+P +K   F+T  DNQ   LI V+EGE  + +EN+LLG F++TGIPP+P GVP+I V  D+DA+ ++ V
Sbjct:  263 ACERAKRTLSSAAQTSIEIDSLYEGIDFYTSITRARFEELCQDLFRSTMDPVERVLRDAKIDKSSVHEIVLVGGSTRIPRIQKLVSDFFNGKEPNKSINPDEAVAYGAAVQAAILSGDSTSKSTNEILLLDVAPLSVGIETAGGVMTPLIKRNTTIPTKKSETFSTFADNQPGVLIQVFEGERARTKENNLLGKFELTGIPPAP-GVPQIEVTFDVDANGIMNV 485          
BLAST of FC931492 vs. ExPASy Swiss-Prot
Match: HSP71_CANAL (Heat shock protein SSA1 OS=Candida albicans GN=SSA1 PE=1 SV=2)

HSP 1 Score: 162.155 bits (409), Expect = 2.478e-39
Identity = 87/224 (38.84%), Postives = 132/224 (58.93%), Query Frame = 3
Query:    6 ATQDAIHKLSSETSVQINVD-LGNGLKVSKNVTREEFEEVNQKVFEKCGSLITQCLHDAKVEIEDLNDVILVGGCSYIPKVRNLIQSTCKKVELYEGINPLEAAVSGAALEGAVTSGINDPFGNLDLLTIQVTPLGIGIRANGNNFVPIIPRNTTMPARKDLVFTTVRDNQSEALIIVYEGEGEKVEENHLLGYFKITGIPPSPKGVPEINVCMDIDASSVLRV 674
            A + A   LSS     I +D L  G+    ++TR  FEE+   +F      + + L DAK++   + +++LVGG + IPK++ L+       EL + INP EA   GAA++ A+ +G +      D+L + V PL +GI   G     +IPRN+T+P +K   F+T  DNQ   LI V+EGE  K ++N+LLG F+++GIPP+P+GVP+I V  DIDA+ +L V
Sbjct:  265 ACERAKRTLSSSAQTSIEIDSLYEGIDFYTSITRARFEELCADLFRSTLDPVGKVLADAKIDKSQVEEIVLVGGSTRIPKIQKLVSDFFNGKELNKSINPDEAVAYGAAVQAAILTG-DTSSKTQDILLLDVAPLSLGIETAGGIMTKLIPRNSTIPTKKSETFSTYADNQPGVLIQVFEGERAKTKDNNLLGKFELSGIPPAPRGVPQIEVTFDIDANGILNV 487          
BLAST of FC931492 vs. ExPASy Swiss-Prot
Match: HSP70_PLEWA (Heat shock 70 kDa protein OS=Pleurodeles waltlii GN=HSP70 PE=2 SV=1)

HSP 1 Score: 162.155 bits (409), Expect = 2.478e-39
Identity = 91/225 (40.44%), Postives = 134/225 (59.56%), Query Frame = 3
Query:    6 ATQDAIHKLSSETSVQINVD-LGNGLKVSKNVTREEFEEVNQKVFEKCGSLITQCLHDAKVEIEDLNDVILVGGCSYIPKVRNLIQSTCKKVELYEGINPLEAAVSGAALEGAVTSGINDPFGNL-DLLTIQVTPLGIGIRANGNNFVPIIPRNTTMPARKDLVFTTVRDNQSEALIIVYEGEGEKVEENHLLGYFKITGIPPSPKGVPEINVCMDIDASSVLRV 674
            A + A   LSS T   I +D L  G+    ++TR  FEE+   +F      + + L DAK++   +++++LVGG + IPK++ L+Q      EL + INP EA   GAA++ A+  G  D   NL DLL + V PL +G+   G     +I RN+T+P ++  +FTT  DNQ   LI VYEGE    ++N LLG F+++GIPP+P+GVP+I V  DIDA+ +L V
Sbjct:  268 ACERAKRTLSSSTQASIEIDSLFEGIDFYTSITRARFEELCADLFRGPLEPVEKALRDAKLDKAQIHEIVLVGGSTRIPKIQKLLQDFFNGRELNKSINPDEAVAYGAAVQAAILMG--DKSENLQDLLLLDVAPLSLGLETAGGVMTVLIKRNSTIPTKQTQIFTTYSDNQPGVLIQVYEGERAMTKDNSLLGKFELSGIPPAPRGVPQIEVTFDIDANGILNV 490          
BLAST of FC931492 vs. ExPASy Swiss-Prot
Match: HSP70_ONCVO (Heat shock 70 kDa protein (Fragment) OS=Onchocerca volvulus PE=2 SV=2)

HSP 1 Score: 162.155 bits (409), Expect = 2.478e-39
Identity = 91/224 (40.62%), Postives = 129/224 (57.59%), Query Frame = 3
Query:    6 ATQDAIHKLSSETSVQINVD-LGNGLKVSKNVTREEFEEVNQKVFEKCGSLITQCLHDAKVEIEDLNDVILVGGCSYIPKVRNLIQSTCKKVELYEGINPLEAAVSGAALEGAVTSGINDPFGNLDLLTIQVTPLGIGIRANGNNFVPIIPRNTTMPARKDLVFTTVRDNQSEALIIVYEGEGEKVEENHLLGYFKITGIPPSPKGVPEINVCMDIDASSVLRV 674
            A + A   LSS +   I +D L  G+    N+TR  FEE+   +F      + + L  AK++   ++D++LVGG + IPKV+ L+       EL + INP EA   GAA++ A+ SG        DLL + V PL +GI   G     +I RNTT+P +    FTT  DNQ   LI VYEGE    ++N+LLG F+++GIPP+P+GVP+I V  DIDA+ +L V
Sbjct:   23 ACERAKRTLSSSSQASIEIDSLFEGIDFYTNITRARFEELCADLFRSTMDPVEKALRVAKMDKAQVHDIVLVGGSTRIPKVQKLLSDFFSGKELNKSINPDEAVAYGAAVQAAILSGDKSEAVQ-DLLLLDVAPLSLGIETAGGVMTALIKRNTTIPTKTSQTFTTYSDNQPGVLIQVYEGERAMTKDNNLLGKFELSGIPPAPRGVPQIEVTFDIDANGILNV 245          
BLAST of FC931492 vs. ExPASy Swiss-Prot
Match: HSP7B_DROME (Heat shock 70 kDa protein cognate 2 OS=Drosophila melanogaster GN=Hsc70-2 PE=1 SV=2)

HSP 1 Score: 161.384 bits (407), Expect = 4.226e-39
Identity = 85/224 (37.95%), Postives = 130/224 (58.04%), Query Frame = 3
Query:    6 ATQDAIHKLSSETSVQINVD-LGNGLKVSKNVTREEFEEVNQKVFEKCGSLITQCLHDAKVEIEDLNDVILVGGCSYIPKVRNLIQSTCKKVELYEGINPLEAAVSGAALEGAVTSGINDPFGNLDLLTIQVTPLGIGIRANGNNFVPIIPRNTTMPARKDLVFTTVRDNQSEALIIVYEGEGEKVEENHLLGYFKITGIPPSPKGVPEINVCMDIDASSVLRV 674
            A + A   LSS T   + +D L  G+     ++R  FEE+N  +F      + + L DAK++ + ++DV+LVGG + IPK++ L+Q      +L   INP EA   GAA++ A+ +G+       DLL + V PL +GI   G     ++ RN  +P ++  +FTT  DNQ+   I VYEGE    ++N+LLG F +TGIPP+P+GVP+I V  D++A  +L V
Sbjct:  267 ACERAKRTLSSSTEASLEIDALHEGIDFYSKISRARFEELNMDLFRSTMQPVERALSDAKMDKKAIHDVVLVGGSTRIPKIQKLLQDLFGGKQLNLSINPDEAVAYGAAVQAAILTGVGSSQIQ-DLLLVDVAPLSLGIETAGGVMTNLVERNARIPCKQQQIFTTYSDNQNAVTIQVYEGERAMTKDNNLLGTFNLTGIPPAPRGVPQIEVAFDLNADGILNV 489          
BLAST of FC931492 vs. ExPASy Swiss-Prot
Match: HSP72_YEAST (Heat shock protein SSA2 OS=Saccharomyces cerevisiae GN=SSA2 PE=1 SV=3)

HSP 1 Score: 161.384 bits (407), Expect = 4.226e-39
Identity = 85/214 (39.72%), Postives = 133/214 (62.15%), Query Frame = 3
Query:   33 SSETSVQINVDLGNGLKVSKNVTREEFEEVNQKVFEKCGSLITQCLHDAKVEIEDLNDVILVGGCSYIPKVRNLIQSTCKKVELYEGINPLEAAVSGAALEGAVTSGINDPFGNLDLLTIQVTPLGIGIRANGNNFVPIIPRNTTMPARKDLVFTTVRDNQSEALIIVYEGEGEKVEENHLLGYFKITGIPPSPKGVPEINVCMDIDASSVLRV 674
            S++TSV+I+  L  G+    ++TR  FEE+   +F      + + L DAK++   +++++LVGG + IPKV+ L+       E    INP EA   GAA++ A+ +G ++     DLL + V PL +GI   G     +IPRN+T+P +K  VF+T  DNQ   LI V+EGE  K ++N+LLG F+++GIPP+P+GVP+I V  D+D++ +L V
Sbjct:  274 SAQTSVEID-SLFEGIDFYTSITRARFEELCADLFRSTLDPVEKVLRDAKLDKSQVDEIVLVGGSTRIPKVQKLVTDYFNGKEPNRSINPDEAVAYGAAVQAAILTG-DESSKTQDLLLLDVAPLSLGIETAGGVMTKLIPRNSTIPTKKSEVFSTYADNQPGVLIQVFEGERAKTKDNNLLGKFELSGIPPAPRGVPQIEVTFDVDSNGILNV 485          
BLAST of FC931492 vs. ExPASy Swiss-Prot
Match: HSP72_SCHPO (Probable heat shock protein ssa2 OS=Schizosaccharomyces pombe GN=ssa2 PE=1 SV=3)

HSP 1 Score: 161.384 bits (407), Expect = 4.226e-39
Identity = 88/224 (39.29%), Postives = 132/224 (58.93%), Query Frame = 3
Query:    6 ATQDAIHKLSSETSVQINVD-LGNGLKVSKNVTREEFEEVNQKVFEKCGSLITQCLHDAKVEIEDLNDVILVGGCSYIPKVRNLIQSTCKKVELYEGINPLEAAVSGAALEGAVTSGINDPFGNLDLLTIQVTPLGIGIRANGNNFVPIIPRNTTMPARKDLVFTTVRDNQSEALIIVYEGEGEKVEENHLLGYFKITGIPPSPKGVPEINVCMDIDASSVLRV 674
            A + A   LSS     I +D L  G+    ++TR  FEE+   +F K    + + L D+KV+   +N+++LVGG + IP+V+ L+       E  + INP EA   GAA++ AV +G        DLL + V PL +GI   G    P+I RNTT+P +K  +F+T  DNQ   LI V+EGE  + ++ +LLG F+++GIPP+P+GVP+I V  D+DA+ +L V
Sbjct:  264 ACERAKRTLSSSAQASIEIDSLFEGIDFYTSITRARFEELCADLFRKTMEPVERVLRDSKVDKASVNEIVLVGGSTRIPRVQKLVSDFFNGKEPCKSINPDEAVAYGAAVQAAVLTGDTSE-KTQDLLLLDVAPLSMGIETAGGVMTPLIKRNTTIPTKKSEIFSTYSDNQPGVLIQVFEGERARTKDCNLLGKFELSGIPPAPRGVPQIEVTFDVDANGILNV 486          
BLAST of FC931492 vs. ExPASy Swiss-Prot
Match: HS71L_MACFA (Heat shock 70 kDa protein 1-like OS=Macaca fascicularis GN=HSPA1L PE=2 SV=1)

HSP 1 Score: 161.384 bits (407), Expect = 4.226e-39
Identity = 89/224 (39.73%), Postives = 131/224 (58.48%), Query Frame = 3
Query:    6 ATQDAIHKLSSETSVQINVD-LGNGLKVSKNVTREEFEEVNQKVFEKCGSLITQCLHDAKVEIEDLNDVILVGGCSYIPKVRNLIQSTCKKVELYEGINPLEAAVSGAALEGAVTSGINDPFGNLDLLTIQVTPLGIGIRANGNNFVPIIPRNTTMPARKDLVFTTVRDNQSEALIIVYEGEGEKVEENHLLGYFKITGIPPSPKGVPEINVCMDIDASSVLRV 674
            A + A   LSS T   + +D L  G+    ++TR  FEE+   +F      + + L DAK++   ++D++LVGG + IPKV+ L+Q      +L + INP EA   GAA++ A+  G        DLL + V PL +G+   G     +I RN+T+P ++  +FTT  DNQ   LI VYEGE    ++N+LLG F +TGIPP+P+GVP+I V  DIDA+ +L V
Sbjct:  268 ACERAKRTLSSSTQANLEIDSLYEGIDFYTSITRARFEELCADLFRGTLEPVEKALRDAKMDKAKIHDIVLVGGSTRIPKVQRLLQDYFNGRDLNKSINPDEAVAYGAAVQAAILMGDKSEKVQ-DLLLLDVAPLSLGLETAGGVMTALIKRNSTIPTKQTQIFTTYSDNQPGVLIQVYEGERAMTKDNNLLGRFDLTGIPPAPRGVPQIEVTFDIDANGILNV 490          
BLAST of FC931492 vs. ExPASy Swiss-Prot
Match: HS71L_HUMAN (Heat shock 70 kDa protein 1-like OS=Homo sapiens GN=HSPA1L PE=1 SV=2)

HSP 1 Score: 161.384 bits (407), Expect = 4.226e-39
Identity = 89/224 (39.73%), Postives = 131/224 (58.48%), Query Frame = 3
Query:    6 ATQDAIHKLSSETSVQINVD-LGNGLKVSKNVTREEFEEVNQKVFEKCGSLITQCLHDAKVEIEDLNDVILVGGCSYIPKVRNLIQSTCKKVELYEGINPLEAAVSGAALEGAVTSGINDPFGNLDLLTIQVTPLGIGIRANGNNFVPIIPRNTTMPARKDLVFTTVRDNQSEALIIVYEGEGEKVEENHLLGYFKITGIPPSPKGVPEINVCMDIDASSVLRV 674
            A + A   LSS T   + +D L  G+    ++TR  FEE+   +F      + + L DAK++   ++D++LVGG + IPKV+ L+Q      +L + INP EA   GAA++ A+  G        DLL + V PL +G+   G     +I RN+T+P ++  +FTT  DNQ   LI VYEGE    ++N+LLG F +TGIPP+P+GVP+I V  DIDA+ +L V
Sbjct:  268 ACERAKRTLSSSTQANLEIDSLYEGIDFYTSITRARFEELCADLFRGTLEPVEKALRDAKMDKAKIHDIVLVGGSTRIPKVQRLLQDYFNGRDLNKSINPDEAVAYGAAVQAAILMGDKSEKVQ-DLLLLDVAPLSLGLETAGGVMTALIKRNSTIPTKQTQIFTTYSDNQPGVLIQVYEGERAMTKDNNLLGRFDLTGIPPAPRGVPQIEVTFDIDANGILNV 490          
The following BLAST results are available for this feature:
BLAST of FC931492 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
GRP78_PONAB1.897e-3939.1978 kDa glucose-regulated protein OS=Pongo abelii G... [more]
HSP71_PARBA2.478e-3938.39Heat shock 70 kDa protein 1 OS=Paracoccidioides br... [more]
HSP71_CANAL2.478e-3938.84Heat shock protein SSA1 OS=Candida albicans GN=SSA... [more]
HSP70_PLEWA2.478e-3940.44Heat shock 70 kDa protein OS=Pleurodeles waltlii G... [more]
HSP70_ONCVO2.478e-3940.63Heat shock 70 kDa protein (Fragment) OS=Onchocerca... [more]
HSP7B_DROME4.226e-3937.95Heat shock 70 kDa protein cognate 2 OS=Drosophila ... [more]
HSP72_YEAST4.226e-3939.72Heat shock protein SSA2 OS=Saccharomyces cerevisia... [more]
HSP72_SCHPO4.226e-3939.29Probable heat shock protein ssa2 OS=Schizosaccharo... [more]
HS71L_MACFA4.226e-3939.73Heat shock 70 kDa protein 1-like OS=Macaca fascicu... [more]
HS71L_HUMAN4.226e-3939.73Heat shock 70 kDa protein 1-like OS=Homo sapiens G... [more]

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Properties
Property NameValue
Genbank descriptionC34105F11EF PostHarvP1 Citrus clementina cDNA clone C34105F11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931492 ID=FC931492; Name=FC931492; organism=Citrus clementina; type=EST; length=697bp
GGGTTGCTACCCAGGATGCAATCCATAAACTATCATCAGAGACGAGTGTT
CAGATTAATGTCGACTTGGGAAATGGATTAAAAGTATCAAAAAATGTAAC
GCGAGAGGAGTTTGAGGAAGTAAACCAAAAGGTATTTGAGAAATGTGGGA
GCCTTATAACCCAGTGCTTGCATGATGCGAAGGTGGAGATAGAGGATCTG
AATGATGTAATACTCGTGGGTGGCTGCTCATATATTCCAAAAGTAAGGAA
TCTTATCCAGAGTACATGCAAAAAAGTAGAACTCTATGAGGGTATTAACC
CATTGGAAGCAGCAGTTAGTGGGGCAGCTCTGGAAGGAGCAGTGACTTCA
GGCATTAACGATCCATTTGGGAACCTGGACCTGTTAACCATCCAAGTCAC
ACCACTTGGCATTGGTATACGAGCTAATGGCAACAACTTTGTACCCATCA
TTCCTAGAAACACCACGATGCCAGCACGGAAAGATCTGGTCTTCACAACA
GTTCGCGACAACCAGTCTGAGGCGCTGATTATTGTTTATGAAGGTGAAGG
GGAGAAGGTAGAAGAGAATCATCTTCTAGGCTATTTCAAGATAACAGGAA
TTCCTCCCTCTCCCAAAGGAGTACCAGAAATAAATGTGTGCATGGACATT
GATGCCTCGAGTGTGCTGAGAGTTTTGGTTGGGGTCATTATGCCTGG
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