FC931494

Overview
NameFC931494
Unique NameFC931494
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length760
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC931494 vs. ExPASy Swiss-Prot
Match: CSK2C_YEAST (Casein kinase II subunit beta' OS=Saccharomyces cerevisiae GN=CKB2 PE=1 SV=1)

HSP 1 Score: 147.517 bits (371), Expect = 7.408e-35
Identity = 78/186 (41.94%), Postives = 102/186 (54.84%), Query Frame = 1
Query:    4 LSSQVPYYDYALDLILD-VESSHGDMFTEEQNELVESAAEMLYGLIHVRYILTSKGMAAMVKFRV*SSVRVHC*FPFLLAIMLCWELLQLEKYKNYDFGRCPRVYCCGQPCLPVGQSDIPRSSTVKIYCPKCEDIYYPRSKYQGNIDGAYFGTTFPHLFLMTYGHLKPQKATQSYVPRVFGFKLHK 558
            L   V  + Y +  I+D ++ S  +  T  + E +ES +  LYGLIH RYI+T KG+  M                               KYK  DFGRCPRVYC  Q  LPVG  DIP    VK+YCP CED+Y P+S    +IDGAYFGT+FP +FL  +  + P+  T+ YVP++FGF+LHK
Sbjct:   68 LQKTVSKFSYVVQYIVDDLDDSILENMTHARLEQLESDSRKLYGLIHARYIITIKGLQKMYA-----------------------------KYKEADFGRCPRVYCNLQQLLPVGLHDIPGIDCVKLYCPSCEDLYIPKSSRHSSIDGAYFGTSFPGMFLQAFPDMVPKHPTKRYVPKIFGFELHK 224          
BLAST of FC931494 vs. ExPASy Swiss-Prot
Match: CSK2C_SCHPO (Probable casein kinase II subunit beta-2 OS=Schizosaccharomyces pombe GN=SPBC2G5.02c PE=2 SV=1)

HSP 1 Score: 129.798 bits (325), Expect = 1.598e-29
Identity = 73/187 (39.04%), Postives = 99/187 (52.94%), Query Frame = 1
Query:    1 GLSSQVPYYDYALDLILDVESSHGDMFTEEQNELVESAAEMLYGLIHVRYILTSKGMAAMVKFRV*SSVRVHC*FPFLLAIMLCWELLQLEKYKNYDFGRCPRVYCCGQPCLPVGQSDIPRSSTVKIYCPKCEDIYYPRSKYQGNIDGAYFGTTFPHLFLMTYGHLKPQKAT---QSYVPRVFGFKL 552
            GL+  VP+Y+ ALDLILD  +   D       +++E++A++LYGLIH RYI+T  G+  M                              EKY    FG CPRV CC    LP G SDI     V ++CP C D+Y P S    NIDG++FG TFPHLF  +Y  L P+++    + Y PR++GFK+
Sbjct:   70 GLNLAVPFYNEALDLILDRTAP--DTLENFDMDVIETSAQILYGLIHQRYIITRTGLHQMA-----------------------------EKYSMGIFGCCPRVNCCYTHVLPAGLSDIVGKMPVMLFCPNCLDLYAPSSSRYKNIDGSFFGATFPHLFFESYPELNPKRSIPCGKIYQPRIYGFKV 225          
BLAST of FC931494 vs. ExPASy Swiss-Prot
Match: CSK2B_YEAST (Casein kinase II subunit beta OS=Saccharomyces cerevisiae GN=CKB1 PE=1 SV=1)

HSP 1 Score: 120.168 bits (300), Expect = 1.267e-26
Identity = 73/217 (33.64%), Postives = 107/217 (49.31%), Query Frame = 1
Query:    4 LSSQVPYYDYALDLILDVES------SHGDMFTEEQ------------------------NELVESAAEMLYGLIHVRYILTSKGMAAMVKFRV*SSVRVHC*FPFLLAIMLCWELLQLEKYKNYDFGRCPRVYCCGQPCLPVGQSDIPRSSTVKIYCPKCEDIYYPRSKYQGNIDGAYFGTTFPHLFLMTYGHLK---PQKATQSYVPRVFGFKLH 555
            LS +VP+Y  ALDLILD+E+         D+  E++                          ++E AAE LYGLIH R+ILT  G+ AM                              EK+ + +FG CPR YC G   LP G SD     TV++YCP C+D+Y P+S     ++GA++GT+FP +FL  +  L+    +K+ +SY  +VFGF+++
Sbjct:   56 LSQEVPHYRKALDLILDLEAMSDEEEDEDDVVEEDEVDQEMQSNDGHDEGKRRNKSPVVNKSIIEHAAEQLYGLIHARFILTKPGLQAMA-----------------------------EKFDHKEFGTCPRYYCNGMQLLPCGLSDTVGKHTVRLYCPSCQDLYLPQSSRFLCLEGAFWGTSFPGVFLKHFKELEEYVERKSKESYELKVFGFRIN 243          
BLAST of FC931494 vs. ExPASy Swiss-Prot
Match: CSK2B_CANAL (Casein kinase II subunit beta OS=Candida albicans GN=CKB1 PE=1 SV=1)

HSP 1 Score: 118.627 bits (296), Expect = 3.685e-26
Identity = 76/218 (34.86%), Postives = 110/218 (50.46%), Query Frame = 1
Query:    1 GLSSQVPYYDYALDLILDVE----------------SSHGDMF--TEEQNE-------LVESAAEMLYGLIHVRYILTSKGMAAMVKFRV*SSVRVHC*FPFLLAIMLCWELLQLEKYKNYDFGRCPRVYCCGQPCLPVGQSDIPRSSTVKIYCPKCEDIYYPRSKYQGNIDGAYFGTTFPHLFLMTYGHLKPQ------KATQS-YVPRVFGFKLHK 558
            GLSSQVPYY  AL  ILD +                S++ D    T ++N        L+  +AE+LYGLIH RYI++ +G+ AM                               K++  DFG CPR +C G   +PVG +D+P   TV+++CP C DIY P S    NIDGA+FGTTFP L +  +  ++ Q      K +Q+ +  ++FGFK+++
Sbjct:   41 GLSSQVPYYREALYTILDYQVETAEDHNTDNTTTNTSNNNDSRNGTSKRNASELPNKALLAHSAELLYGLIHARYIVSKQGLTAMAS-----------------------------KFERNDFGSCPRYFCDGMHLIPVGSTDVPGQETVRLFCPCCNDIYIPSSSRYLNIDGAFFGTTFPGLLVKMFPEIENQCRIRITKFSQNDFGLKLFGFKINE 229          
BLAST of FC931494 vs. ExPASy Swiss-Prot
Match: SSL_DROME (Suppressor-of-stellate-like protein OS=Drosophila melanogaster GN=Ssl PE=2 SV=1)

HSP 1 Score: 115.931 bits (289), Expect = 2.389e-25
Identity = 63/174 (36.21%), Postives = 89/174 (51.15%), Query Frame = 1
Query:   37 LDLILDVESSHGDMFTEEQNELVESAAEMLYGLIHVRYILTSKGMAAMVKFRV*SSVRVHC*FPFLLAIMLCWELLQLEKYKNYDFGRCPRVYCCGQPCLPVGQSDIPRSSTVKIYCPKCEDIYYPRSKYQGNIDGAYFGTTFPHLFLMTYGHLKPQKATQSYVPRVFGFKLHK 558
            L+++LD E  + D    E+ +L        YG+IH RYI++ +G+  M                               KY+  DFG CPRV+C  Q  LPVG  D+   + VKIYCP C ++Y P   + G +DGA FGT+FPH+F M    L P    + Y+PR++GF+LHK
Sbjct:   51 LEVVLDPEFDNEDWDCAEEKKL--------YGMIHARYIVSPRGIEDMRL-----------------------------KYERGDFGSCPRVFCKRQKVLPVGLHDVWDKAQVKIYCPSCNNVYIP-LPHNGMLDGAMFGTSFPHMFFMQLPSLIPSPPVEKYIPRIYGFQLHK 186          
BLAST of FC931494 vs. ExPASy Swiss-Prot
Match: CSK2B_NEUCR (Casein kinase II subunit beta-1 OS=Neurospora crassa GN=ckb-1 PE=2 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 7.192e-22
Identity = 68/192 (35.42%), Postives = 85/192 (44.27%), Query Frame = 1
Query:    1 GLSSQVPYYDYALDLILDVESSHGDMFTEEQNE-----------------------------LVESAAEMLYGLIHVRYILTSKGMAAMVKFRV*SSVRVHC*FPFLLAIMLCWELLQLEKYKNYDFGRCPRVYCCGQPCLPVGQSDIPRSSTVKIYCPKCEDIYYPRSKYQGNIDGAYFGTTFPHLFLMTY 489
            GL +QV  Y  AL++ILDVE    D   EE  E                             ++ES+AEMLYGLIH R+I +  G+  M                              EKY+   FG CPR  C     LPVG SD P   TVK++CP C D+Y P +     +DGA+FG TF  LFLMT+
Sbjct:   40 GLQTQVAMYKEALEMILDVEPEDDDDEEEEDEEDEEDMSGGDGINKPHGERRHHSRIASDLSVIESSAEMLYGLIHQRFICSRAGIQQMS-----------------------------EKYELGHFGICPRTNCNQTRTLPVGLSDTPGEDTVKLFCPSCLDVYVPPNSRFQTVDGAFFGRTFGALFLMTF 202          
BLAST of FC931494 vs. ExPASy Swiss-Prot
Match: STEL8_DROME (Stellate orphon protein at 12D OS=Drosophila melanogaster GN=Ste12DOR PE=1 SV=3)

HSP 1 Score: 83.5741 bits (205), Expect = 1.314e-15
Identity = 52/154 (33.77%), Postives = 76/154 (49.35%), Query Frame = 1
Query:   22 YYDYALDLILD--VESSHGDMFTEEQNELVESAAEMLYGLIHVRYILTSKGMAAMVKFRV*SSVRVHC*FPFLLAIMLCWELLQLEKYKNYDFGRCPRVYCCGQPCLPVGQSDIPRSSTVKIYCPKCEDIYYPRSKYQGNIDGAYFGTTFPHLF 477
            Y+   LD+IL   ++SS G ++ +E+           YG+IH RYI + +G+ AM +                             KY   DFG CP + C  Q  LPVG S +   STVKI+CP+C+  ++P+S  Q  +DGA FG +FP +F
Sbjct:   43 YFSEILDVILKPVIDSSSGLLYGDEKK---------WYGMIHARYIRSERGLIAMHR-----------------------------KYMRGDFGSCPNISCDRQNTLPVGVSAVWGKSTVKIHCPRCKSNFHPKSDTQ--LDGAMFGPSFPDIF 156          
BLAST of FC931494 vs. ExPASy Swiss-Prot
Match: STEL5_DROME (Stellate protein CG33243 OS=Drosophila melanogaster GN=Ste:CG33243 PE=1 SV=2)

HSP 1 Score: 83.5741 bits (205), Expect = 1.314e-15
Identity = 52/154 (33.77%), Postives = 76/154 (49.35%), Query Frame = 1
Query:   22 YYDYALDLILD--VESSHGDMFTEEQNELVESAAEMLYGLIHVRYILTSKGMAAMVKFRV*SSVRVHC*FPFLLAIMLCWELLQLEKYKNYDFGRCPRVYCCGQPCLPVGQSDIPRSSTVKIYCPKCEDIYYPRSKYQGNIDGAYFGTTFPHLF 477
            Y+   LD+IL   ++SS G ++ +E+           YG+IH RYI + +G+ AM +                             KY   DFG CP + C  Q  LPVG S +   STVKI+CP+C+  ++P+S  Q  +DGA FG +FP +F
Sbjct:   43 YFSEILDVILKPVIDSSSGLLYGDEKK---------WYGMIHARYIRSERGLIAMHR-----------------------------KYLRGDFGSCPNISCYRQNTLPVGLSAVWGKSTVKIHCPRCKSNFHPKSDTQ--LDGAMFGPSFPDIF 156          
BLAST of FC931494 vs. ExPASy Swiss-Prot
Match: STEL4_DROME (Stellate protein CG33239/CG33241 OS=Drosophila melanogaster GN=Ste:CG33239 PE=1 SV=2)

HSP 1 Score: 83.5741 bits (205), Expect = 1.314e-15
Identity = 52/154 (33.77%), Postives = 76/154 (49.35%), Query Frame = 1
Query:   22 YYDYALDLILD--VESSHGDMFTEEQNELVESAAEMLYGLIHVRYILTSKGMAAMVKFRV*SSVRVHC*FPFLLAIMLCWELLQLEKYKNYDFGRCPRVYCCGQPCLPVGQSDIPRSSTVKIYCPKCEDIYYPRSKYQGNIDGAYFGTTFPHLF 477
            Y+   LD+IL   ++SS G ++ +E+           YG+IH RYI + +G+ AM +                             KY   DFG CP + C  Q  LPVG S +   STVKI+CP+C+  ++P+S  Q  +DGA FG +FP +F
Sbjct:   43 YFSEILDVILKPVIDSSSGLLYGDEKK---------WYGMIHARYIRSERGLIAMHR-----------------------------KYMRGDFGSCPNISCDRQNTLPVGLSAVWGKSTVKIHCPRCKSNFHPKSDTQ--LDGAMFGPSFPDIF 156          
BLAST of FC931494 vs. ExPASy Swiss-Prot
Match: STEL3_DROME (Stellate protein CG33238 OS=Drosophila melanogaster GN=Ste:CG33238 PE=1 SV=3)

HSP 1 Score: 83.5741 bits (205), Expect = 1.314e-15
Identity = 52/154 (33.77%), Postives = 76/154 (49.35%), Query Frame = 1
Query:   22 YYDYALDLILD--VESSHGDMFTEEQNELVESAAEMLYGLIHVRYILTSKGMAAMVKFRV*SSVRVHC*FPFLLAIMLCWELLQLEKYKNYDFGRCPRVYCCGQPCLPVGQSDIPRSSTVKIYCPKCEDIYYPRSKYQGNIDGAYFGTTFPHLF 477
            Y+   LD+IL   ++SS G ++ +E+           YG+IH RYI + +G+ AM +                             KY   DFG CP + C  Q  LPVG S +   STVKI+CP+C+  ++P+S  Q  +DGA FG +FP +F
Sbjct:   43 YFSEILDVILKPVIDSSSGLLYGDEKK---------WYGMIHARYIRSERGLIAMHR-----------------------------KYLRGDFGSCPNISCYRQNTLPVGLSAVWGKSTVKIHCPRCKSNFHPKSDTQ--LDGAMFGPSFPDIF 156          
The following BLAST results are available for this feature:
BLAST of FC931494 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 34
Match NameE-valueIdentityDescription
CSK2C_YEAST7.408e-3541.94Casein kinase II subunit beta' OS=Saccharomyces ce... [more]
CSK2C_SCHPO1.598e-2939.04Probable casein kinase II subunit beta-2 OS=Schizo... [more]
CSK2B_YEAST1.267e-2633.64Casein kinase II subunit beta OS=Saccharomyces cer... [more]
CSK2B_CANAL3.685e-2634.86Casein kinase II subunit beta OS=Candida albicans ... [more]
SSL_DROME2.389e-2536.21Suppressor-of-stellate-like protein OS=Drosophila ... [more]
CSK2B_NEUCR7.192e-2235.42Casein kinase II subunit beta-1 OS=Neurospora cras... [more]
STEL8_DROME1.314e-1533.77Stellate orphon protein at 12D OS=Drosophila melan... [more]
STEL5_DROME1.314e-1533.77Stellate protein CG33243 OS=Drosophila melanogaste... [more]
STEL4_DROME1.314e-1533.77Stellate protein CG33239/CG33241 OS=Drosophila mel... [more]
STEL3_DROME1.314e-1533.77Stellate protein CG33238 OS=Drosophila melanogaste... [more]

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Properties
Property NameValue
Genbank descriptionC34105G01EF PostHarvP1 Citrus clementina cDNA clone C34105G01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931494 ID=FC931494; Name=FC931494; organism=Citrus clementina; type=EST; length=760bp
GGGTTGAGCAGTCAAGTTCCATACTATGATTATGCTCTTGATTTGATATT
GGATGTTGAATCTTCTCATGGTGATATGTTCACTGAAGAACAGAATGAAC
TGGTGGAATCAGCAGCAGAGATGCTGTATGGTCTGATTCATGTACGGTAC
ATCCTTACTAGCAAGGGAATGGCTGCAATGGTAAAATTCAGAGTTTGATC
ATCTGTACGGGTGCATTGTTAATTTCCCTTTTTATTGGCAATTATGTTGT
GTTGGGAACTTTTGCAGTTAGAGAAGTACAAAAACTATGATTTTGGGAGA
TGCCCAAGAGTATACTGCTGTGGGCAACCCTGCCTTCCTGTCGGTCAATC
AGACATCCCTCGTTCAAGTACTGTTAAAATATACTGCCCGAAATGTGAAG
ATATATATTATCCTCGGTCCAAGTACCAAGGCAATATCGATGGTGCTTAT
TTTGGGACTACCTTTCCTCACCTATTTCTAATGACATATGGACACTTAAA
GCCACAAAAGGCTACACAGAGCTATGTCCCAAGGGTTTTTGGTTTCAAGC
TTCACAAGCCCTAACATTGGAGTTGCAAGTTGCGTTAGTGTTGAGAATTC
CGGTGGCAGTGCATTTCACATTTTCTCTTTTGCCTGCCTCTCTACTGAAA
GTATGCATGGCCCCCACAAAGTGAGGTAAGCGGGGTACTTCTGAATATAT
TACAATTGATCGCATATGGATATGTTTAATGCTAGATGGTCTGGTTGAGT
GAAACCTATC
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